BLASTX nr result

ID: Panax21_contig00011922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011922
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525869.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog ...    75   7e-12
emb|CAN60615.1| hypothetical protein VITISV_003254 [Vitis vinifera]    75   7e-12
ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog ...    74   2e-11
ref|XP_002865759.1| EMB1879 [Arabidopsis lyrata subsp. lyrata] g...    67   1e-09

>ref|XP_002525869.1| conserved hypothetical protein [Ricinus communis]
           gi|223534874|gb|EEF36563.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 520

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 57/132 (43%), Positives = 71/132 (53%), Gaps = 23/132 (17%)
 Frame = -3

Query: 329 MKLKQPPTSASQSLTGAATSQDARLLVRETLRIXXXXXXXXXXXXAMETAGLRLPPPESN 150
           +KLKQ P   +Q+LT   +SQDARLLVRETLRI               +A L   PP  +
Sbjct: 5   IKLKQSPNPTAQTLTSTTSSQDARLLVRETLRI---------------SANLASAPPAES 49

Query: 149 F-----------------------QEQFVDSSLRLICSEEIDGRRWNYFAQNNDSGSNKF 39
                                   +E+FVDSSLRLIC EEIDGR+W Y A+N+  G  +F
Sbjct: 50  LALLDNNISNDSSNKNKSRKLGFVEEEFVDSSLRLICCEEIDGRKWKYVAEND--GFGRF 107

Query: 38  KKCSIRAVSLQS 3
           KK S R+VSLQ+
Sbjct: 108 KKNSFRSVSLQN 119


>ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
           gi|297739449|emb|CBI29631.3| unnamed protein product
           [Vitis vinifera]
          Length = 504

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/112 (44%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = -3

Query: 329 MKLKQPPTSASQSLTGAATSQDARLLVRETLRIXXXXXXXXXXXXAMETAGLRLPPPESN 150
           MKLKQ P+  +      ATSQDARLL RETLRI                + +   P   N
Sbjct: 4   MKLKQSPSPQT-----LATSQDARLLARETLRISASLASSPAP------SAVASSPEARN 52

Query: 149 F---QEQFVDSSLRLICSEEIDGRRWNYFAQNNDSGSNKFKKCSIRAVSLQS 3
                EQFVD+SLRLIC EEI+GRRWNY   +N+ G+ + +  S+RAV  Q+
Sbjct: 53  LGIVDEQFVDASLRLICCEEINGRRWNYVV-DNEGGNGQGRNGSLRAVCSQT 103


>emb|CAN60615.1| hypothetical protein VITISV_003254 [Vitis vinifera]
          Length = 470

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/112 (44%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = -3

Query: 329 MKLKQPPTSASQSLTGAATSQDARLLVRETLRIXXXXXXXXXXXXAMETAGLRLPPPESN 150
           MKLKQ P+  +      ATSQDARLL RETLRI                + +   P   N
Sbjct: 4   MKLKQSPSPQT-----LATSQDARLLARETLRISASLASSPAP------SAVASSPEARN 52

Query: 149 F---QEQFVDSSLRLICSEEIDGRRWNYFAQNNDSGSNKFKKCSIRAVSLQS 3
                EQFVD+SLRLIC EEI+GRRWNY   +N+ G+ + +  S+RAV  Q+
Sbjct: 53  LGIVDEQFVDASLRLICCEEINGRRWNYVV-DNEGGNGQGRNGSLRAVCSQT 103


>ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
           gi|449478104|ref|XP_004155224.1| PREDICTED: UPF0420
           protein C16orf58 homolog [Cucumis sativus]
          Length = 507

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 52/125 (41%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
 Frame = -3

Query: 329 MKLKQPPTSASQSLTGAATSQDARLLVRETLRIXXXXXXXXXXXXAMETAGLRLPPPESN 150
           + LKQ P SA++S+   A+S +AR+LVRETLR+               TA L  PP +S 
Sbjct: 4   INLKQSPNSAAKSV---ASSTEARILVRETLRV---------------TANLASPPLDSL 45

Query: 149 ----------------FQEQFVDSSLRLICSEEIDGRRWNYFAQNNDSGSNKFKKCSIRA 18
                               F+DS+ RLIC EEIDGRRWNY A    SG  K K  SIRA
Sbjct: 46  PPTTSPAAPHATNLPILDNHFLDSTSRLICCEEIDGRRWNYVADIQPSG--KLKNASIRA 103

Query: 17  VSLQS 3
           + LQ+
Sbjct: 104 LCLQT 108


>ref|XP_002865759.1| EMB1879 [Arabidopsis lyrata subsp. lyrata]
           gi|297311594|gb|EFH42018.1| EMB1879 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 499

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/109 (42%), Positives = 61/109 (55%)
 Frame = -3

Query: 329 MKLKQPPTSASQSLTGAATSQDARLLVRETLRIXXXXXXXXXXXXAMETAGLRLPPPESN 150
           +K   PP + S S     +S   RLL RETLRI               +     P P+S 
Sbjct: 6   LKHHSPPDTISSS-----SSDSVRLLSRETLRISASLASPPVDDLPPHSP----PSPDS- 55

Query: 149 FQEQFVDSSLRLICSEEIDGRRWNYFAQNNDSGSNKFKKCSIRAVSLQS 3
              QF+ S+LRLIC EEIDGRR+ Y A+++  GS +FKK S+RA+SL+S
Sbjct: 56  ---QFLHSTLRLICCEEIDGRRFKYVAESD--GSGRFKKNSVRAISLES 99


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