BLASTX nr result

ID: Panax21_contig00011911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011911
         (1992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27790.3| unnamed protein product [Vitis vinifera]              445   e-122
ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   439   e-120
ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi...   412   e-112
ref|XP_002327724.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]     399   e-108

>emb|CBI27790.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  445 bits (1144), Expect = e-122
 Identities = 255/472 (54%), Positives = 310/472 (65%), Gaps = 9/472 (1%)
 Frame = -2

Query: 1814 VIIISTGYFVAAFLFGATLEYVRFM*LWCCFRMGIDRKDVRIVCHYNIPKSMEAFYQESG 1635
            V+I S G+F   F+F   L +  F  +     +GIDRKDVRIVCH+NIPKSMEAFYQESG
Sbjct: 309  VVINSWGFF---FIFNFFLFFALFNII---LSIGIDRKDVRIVCHFNIPKSMEAFYQESG 362

Query: 1634 RAGRDQSPSRSVLYYGMDDRRRMEFILSKAESKKLQSSSLQDGCTKKSLTDFKLVTP*SC 1455
            RAGRDQ PSRS+LYYG+DDR+RMEFILS AESKKLQSSS QDG +KKSL DF        
Sbjct: 363  RAGRDQLPSRSLLYYGIDDRKRMEFILSNAESKKLQSSSSQDGMSKKSLADFS------- 415

Query: 1454 Q*S*MLIDVMRIASG*CMQMVEYCEESDCRRKKILESFGEQVPVTLCGKSCDACKHPSIV 1275
                               MVEYCE S CRRKKILE+FGEQV  ++C KSCDACKHP++V
Sbjct: 416  ------------------HMVEYCEGSSCRRKKILENFGEQVAASICRKSCDACKHPNLV 457

Query: 1274 AKYLEELTSASAFRKT---SRIYISSSSNLIDEDQFSEFWTRXXXXXXXXXXXXXXXXXX 1104
            AKYLEE  SA A R+    SRI+ISSSS+L+D++Q +EFW R                  
Sbjct: 458  AKYLEEFASACALRQNNVFSRIFISSSSDLVDKEQLTEFWNRDDEVSGSEEDISDSDDGI 517

Query: 1103 XAVKTLARSSLSSKTKLNEKIELLQRAEEKYYQDKSHEKQSNKLNKNAISDTLRELSKQR 924
               K++AR  L SK+ L+EKIELLQRAEE YYQ+K  +KQ NK +KNAIS+ LRE SKQR
Sbjct: 518  EVGKSMARPKLPSKSGLSEKIELLQRAEENYYQNKFPDKQINKPDKNAISEALRETSKQR 577

Query: 923  LLNAVKLSQQRLGNLEIDFETSAAFLENECYKKFGKSGKSFYLSQMASNIRWLSTANYXX 744
            LLNA+K +QQRLGNLEI+ ETSA FLENECYKK+GK+GKSFY SQ+AS +RWLSTAN   
Sbjct: 578  LLNALKQTQQRLGNLEINLETSAIFLENECYKKYGKTGKSFYYSQVASTVRWLSTANSTD 637

Query: 743  XXXXXXXXXXXXSHNINPKEKSSSTSPSLLDQVPKEITNEKIHCSVKSETPSTTLE---S 573
                        + NI  K  S   S S  DQ P +I+N + HCS K +T S       +
Sbjct: 638  LTNRLGTKTSSATDNIISKADSPIISSS--DQGPTKISNAE-HCSAKPQTSSCASPMQGA 694

Query: 572  ITQDTKLPPIPSITEFINSKRARGSQ---LSTSKNHSPNSMQKNREKRTLFQ 426
             +QD  LPPIPS+++F+ S+  +G Q   LS  +  SP   ++N EKR+  Q
Sbjct: 695  SSQDKGLPPIPSLSDFVKSRTVKGHQANPLSKLRKQSPKRAERNLEKRSRLQ 746


>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis vinifera]
          Length = 730

 Score =  439 bits (1130), Expect = e-120
 Identities = 248/443 (55%), Positives = 297/443 (67%), Gaps = 10/443 (2%)
 Frame = -2

Query: 1724 FRMGIDRKDVRIVCHYNIPKSMEAFYQESGRAGRDQSPSRSVLYYGMDDRRRMEFILSKA 1545
            F MGIDRKDVRIVCH+NIPKSMEAFYQESGRAGRDQ PSRS+LYYG+DDR+RMEFILS A
Sbjct: 316  FGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNA 375

Query: 1544 ESKKLQSSSLQDGCTKKSLTDFKLVTP*SCQ*S*MLIDVMRIASG*CMQMVEYCEESDCR 1365
            ESKKLQSSS QDG +KKSL DF                           MVEYCE S CR
Sbjct: 376  ESKKLQSSSSQDGMSKKSLADFS-------------------------HMVEYCEGSSCR 410

Query: 1364 RKKILESFGEQVPVTLCGKSCDACKHPSIVAKYLEELTSASAFRKT---SRIYISSSSNL 1194
            RKKILE+FGEQV  ++C KSCDACKHP++VAKYLEE  SA A R+    SRI+ISSSS+L
Sbjct: 411  RKKILENFGEQVAASICRKSCDACKHPNLVAKYLEEFASACALRQNNVFSRIFISSSSDL 470

Query: 1193 IDEDQFSEFWTRXXXXXXXXXXXXXXXXXXXAVKTLARSSLSSKTKLNEKIELLQRAEEK 1014
            +D++Q +EFW R                     K++AR  L SK+ L+EKIELLQRAEE 
Sbjct: 471  VDKEQLTEFWNRDDEVSGSEEDISDSDDGIEVGKSMARPKLPSKSGLSEKIELLQRAEEN 530

Query: 1013 YYQDKSHEKQSNKLNKNAISDTLRELSKQRLLNAVKLSQQRLGNL-EIDFETSAAFLENE 837
            YYQ+K  +KQ NK +KNAIS+ LRE SKQRLLNA+K +QQRLGNL EI+ ETSA FLENE
Sbjct: 531  YYQNKFPDKQINKPDKNAISEALRETSKQRLLNALKQTQQRLGNLEEINLETSAIFLENE 590

Query: 836  CYKKFGKSGKSFYLSQMASNIRWLSTANYXXXXXXXXXXXXXXSHNINPKEKSSSTSPSL 657
            CYKK+GK+GKSFY SQ+AS +RWLSTAN               + NI  K  S   S S 
Sbjct: 591  CYKKYGKTGKSFYYSQVASTVRWLSTANSTDLTNRLGTKTSSATDNIISKADSPIISSS- 649

Query: 656  LDQVPKEITNEKIHCSVKSETPSTTLE---SITQDTKLPPIPSITEFINSKRARGSQ--- 495
             DQ P +I+N + HCS K +T S       + +QD  LPPIPS+++F+ S+  +G Q   
Sbjct: 650  -DQGPTKISNAE-HCSAKPQTSSCASPMQGASSQDKGLPPIPSLSDFVKSRTVKGHQANP 707

Query: 494  LSTSKNHSPNSMQKNREKRTLFQ 426
            LS  +  SP   ++N EKR+  Q
Sbjct: 708  LSKLRKQSPKRAERNLEKRSRLQ 730


>ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi|223529697|gb|EEF31639.1|
            DNA helicase, putative [Ricinus communis]
          Length = 718

 Score =  412 bits (1060), Expect = e-112
 Identities = 226/422 (53%), Positives = 285/422 (67%), Gaps = 4/422 (0%)
 Frame = -2

Query: 1703 KDVRIVCHYNIPKSMEAFYQESGRAGRDQSPSRSVLYYGMDDRRRMEFILSKAESKKLQS 1524
            KDV++VCH+NIPKSMEAFYQESGRAGRDQ P RS+LYYG+DD++RMEFILS A SKKLQS
Sbjct: 322  KDVKLVCHFNIPKSMEAFYQESGRAGRDQLPCRSLLYYGVDDQKRMEFILSSAGSKKLQS 381

Query: 1523 SSLQDGCTKKSLTDFKLVTP*SCQ*S*MLIDVMRIASG*CMQMVEYCEESDCRRKKILES 1344
            SS QDG +KKSL+DFK                         QMVEYCE S CRRKKILES
Sbjct: 382  SSSQDGLSKKSLSDFK-------------------------QMVEYCEGSGCRRKKILES 416

Query: 1343 FGEQVPVTLCGKSCDACKHPSIVAKYLEELTSASAFRKT--SRIYISSSSNLIDEDQFSE 1170
            FGEQVPV+LC K+CDAC+HP++VAKYLEEL +A   R+   S+I+ISSS+   D  QFSE
Sbjct: 417  FGEQVPVSLCKKTCDACRHPNLVAKYLEELKTACTARRAGLSQIFISSSTE--DRGQFSE 474

Query: 1169 FWTRXXXXXXXXXXXXXXXXXXXAVKTLARSSLSSKTKLNEKIELLQRAEEKYYQDKSHE 990
            FW R                    VK+LARS LS K+ +NE++ELLQ AEE YYQ+++ +
Sbjct: 475  FWNRDDEVSNSEEDISDSDDGTEVVKSLARSKLSRKSGVNERMELLQHAEENYYQNRNSD 534

Query: 989  KQSNKLNKNAISDTLRELSKQRLLNAVKLSQQRLGNLEIDFETSAAFLENECYKKFGKSG 810
            KQ NK +KNAISDTLR+ SKQRLLNA+K +QQ+LGNL I+ E SA++LENECYKK+GKSG
Sbjct: 535  KQVNKADKNAISDTLRQSSKQRLLNALKQAQQQLGNLSIELEASASYLENECYKKYGKSG 594

Query: 809  KSFYLSQMASNIRWLSTANYXXXXXXXXXXXXXXSHNINPKEKSSSTSPSLLDQVPKEIT 630
            KSFY SQ+AS +RW+ST N                 N   KE+   T  S ++Q  K   
Sbjct: 595  KSFYYSQVASTVRWISTTNPTDLTNRLSSSTPSPPKNTLLKEEPPETPLSSMEQKSK-TP 653

Query: 629  NEKIHCSVKSE--TPSTTLESITQDTKLPPIPSITEFINSKRARGSQLSTSKNHSPNSMQ 456
            + ++H SV S   T ++  +S +  +KLP IPS +EF+N K+A+     TS+N SP  ++
Sbjct: 654  DLELHRSVASSETTTASPTQSASMSSKLPAIPSFSEFVNRKKAKDDNQYTSQNDSPKRLK 713

Query: 455  KN 450
            K+
Sbjct: 714  KS 715


>ref|XP_002327724.1| predicted protein [Populus trichocarpa] gi|222836809|gb|EEE75202.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  400 bits (1027), Expect = e-109
 Identities = 228/449 (50%), Positives = 289/449 (64%), Gaps = 31/449 (6%)
 Frame = -2

Query: 1691 IVCHYNIPKSMEAFYQESGRAGRDQSPSRSVLYYGMDDRRRMEFILSKAESKKLQSSSLQ 1512
            +VCH+NIPKSME+FYQESGRAGRDQ PSRS+LYYG+DD ++MEFIL  AE+KKLQSSS +
Sbjct: 1    MVCHFNIPKSMESFYQESGRAGRDQLPSRSLLYYGVDDHKKMEFILRNAENKKLQSSSSK 60

Query: 1511 DGCTKKSLTDFKLVTP*SCQ*S*MLIDVMRIASG*CMQMVEYCEESDCRRKKILESFGEQ 1332
               +KKSLTDF L                         M+EYCE S CRRKKILESFGEQ
Sbjct: 61   GELSKKSLTDFNL-------------------------MIEYCEGSGCRRKKILESFGEQ 95

Query: 1331 VPVTLCGKSCDACKHPSIVAKYLEELTSASAFRKT--SRIYISSSSNLIDED-----QFS 1173
            V  TLC KSCDACKHP++VAKYLEELT++ A ++   SR+++S S+++IDE+     QFS
Sbjct: 96   VSATLCKKSCDACKHPNLVAKYLEELTTSIARQRNGFSRVFMSRSTDMIDEEFRIDEQFS 155

Query: 1172 EFWTRXXXXXXXXXXXXXXXXXXXAVKTLARSSLSSKTKLNEKIELLQRAEEKYYQDKSH 993
            EFW R                    VK+L RS LS K+ ++EKIELLQRAEE YYQ+K+ 
Sbjct: 156  EFWNRDDEGKSSEEDISDFDDETEVVKSLPRSRLSRKSGVDEKIELLQRAEENYYQNKNF 215

Query: 992  EKQSNKLNKNAISDTLRELSKQRLLNAVKLSQQRLGNLEIDFETSAAFLENECYKKFGKS 813
            +K  NK++KNAIS+TLRE SKQRLLNA+KL+ +RLG L I+ +TSA+FLENECYKK+GKS
Sbjct: 216  DKLKNKVDKNAISETLREASKQRLLNALKLAHKRLGILNIELDTSASFLENECYKKYGKS 275

Query: 812  GKSFYLSQMASNIRWLSTANYXXXXXXXXXXXXXXSHNINPKEKSSSTSPS-LLDQVPKE 636
            GK+FY SQ+AS +RWLS+                   +   KE    T PS LL+Q P E
Sbjct: 276  GKTFYYSQVASTVRWLSSTTLVELTNRLGPGTPSVPVS---KEHPPETPPSPLLEQRPPE 332

Query: 635  ITNEKIHCS-----VKSETPSTTL------------------ESITQDTKLPPIPSITEF 525
             TN K H S     ++ ++P TT                   ES +  TKLP IPS +EF
Sbjct: 333  TTNLKRHSSFHSPLLEQKSPETTTPRLDHTFQSETSMNTSPSESSSLSTKLPSIPSFSEF 392

Query: 524  INSKRARGSQLSTSKNHSPNSMQKNREKR 438
            +NSK+ +G+  +TS+N S   ++K  EKR
Sbjct: 393  VNSKKEKGNHANTSQNQSHMRLEKTGEKR 421


>gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
          Length = 772

 Score =  399 bits (1026), Expect = e-108
 Identities = 226/436 (51%), Positives = 283/436 (64%), Gaps = 29/436 (6%)
 Frame = -2

Query: 1724 FRMGIDRKDVRIVCHYNIPKSMEAFYQESGRAGRDQSPSRSVLYYGMDDRRRMEFILSKA 1545
            F MGIDRKDVR+VCH+NIPKSME+FYQESGRAGRDQ PS+S+LYYG+DDR++MEFIL  A
Sbjct: 314  FGMGIDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSKSLLYYGVDDRKKMEFILRNA 373

Query: 1544 ESKKLQSSSLQDGCTKKSLTDFKLVTP*SCQ*S*MLIDVMRIASG*CMQMVEYCEESDCR 1365
            E+KKLQSSS     +KKSLTDF L                         M+EYCE + CR
Sbjct: 374  ENKKLQSSSSGGELSKKSLTDFNL-------------------------MIEYCEGAGCR 408

Query: 1364 RKKILESFGEQVPVTLCGKSCDACKHPSIVAKYLEELTSASAFRKT--SRIYISSSSNLI 1191
            RKKILESFGEQV  TLC KSCDACKHP++VAKYLEELT++ A ++   SR+++S S+++I
Sbjct: 409  RKKILESFGEQVSATLCKKSCDACKHPNLVAKYLEELTTSIARQRNGFSRVFMSRSTDMI 468

Query: 1190 DED-----QFSEFWTRXXXXXXXXXXXXXXXXXXXAVKTLARSSLSSKTKLNEKIELLQR 1026
            DE+     Q SEFW R                   AVK+L RS LS K+ ++EKIELLQR
Sbjct: 469  DEEFRIDEQISEFWNRDDEAKSSEEDISDFDDETEAVKSLPRSRLSRKSGVDEKIELLQR 528

Query: 1025 AEEKYYQDKSHEKQSNKLNKNAISDTLRELSKQRLLNAVKLSQQRLGNLEIDFETSAAFL 846
            AEE YYQ+K+ +K  NK++KNAIS+TLRE SKQRLLNA+K++ QRLG L I+ +TSA+FL
Sbjct: 529  AEENYYQNKNFDKLKNKVDKNAISETLREASKQRLLNALKVAHQRLGILNIELDTSASFL 588

Query: 845  ENECYKKFGKSGKSFYLSQMASNIRWLSTA--------------------NYXXXXXXXX 726
            ENECYKK+GKSGK+FY SQ+AS +RWLS+                      +        
Sbjct: 589  ENECYKKYGKSGKTFYYSQVASTVRWLSSTTLVELTNRLGPGTPSVPVSKEHPPETPPSP 648

Query: 725  XXXXXXSHNINPKEKSSSTSPSLLDQVPKEITNEKIHCSVKSETPSTT--LESITQDTKL 552
                      N K +SS  SP LL+Q   E T  ++H S +SET   T   ES +  +KL
Sbjct: 649  SLEQRPPETTNLKRQSSFKSP-LLEQKSPETTTPRLHHSFQSETSMNTSPSESSSLSSKL 707

Query: 551  PPIPSITEFINSKRAR 504
            P IPS +EF+N K+ R
Sbjct: 708  PSIPSFSEFVNGKKGR 723


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