BLASTX nr result

ID: Panax21_contig00011866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011866
         (1709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...   228   3e-57
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   227   6e-57
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   217   9e-54
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-48
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...   195   3e-47

>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 467

 Score =  228 bits (582), Expect = 3e-57
 Identities = 168/473 (35%), Positives = 253/473 (53%), Gaps = 16/473 (3%)
 Frame = +2

Query: 50   SDYKQQKLYQLQTVCDKISVLPDCILQHILSFLPTKDAVATCILSKRWKFLWTSVPNIDF 229
            + +K Q+ Y +  + D IS LP+ IL +ILS L T++AV T IL+ +W++LWT +P  DF
Sbjct: 9    NSHKLQR-YHMVDMKDMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDF 67

Query: 230  DDALLYTSEMNGWFPLEVSCFMNFVERVLLLRDASAMKKFRLSCRVCF-SASRVHAWISA 406
             D+   + + N   P    C ++ V++  LL  ++ +KK  +   V    A +V + +S+
Sbjct: 68   RDS---SPKRNSKSP---DCLVDLVDQ--LLHKSNRIKKLFIELPVTIVDAGKVSSMLSS 119

Query: 407  AVMHNIQELDLCLFVEKP-FMLPLCVFDSKSLTVLKIEMNCVLELPTCISFPSLRILHLC 583
            A+MH++ +L L L  E   F+LP     S+SLT L I    +  +P  I FPSL+IL   
Sbjct: 120  ALMHDVHDLTLNLESENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFA 179

Query: 584  LVTFLNDYSTHKLFSSCPVLQELAILDCEWMNLKSVAISIPTLKSLTIDDLPYFGSD--D 757
             VTF N+ S  +LFS CPVLQ+L+   C W+N+ +++++IPTLK L I    +F S   D
Sbjct: 180  HVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNI-NISVAIPTLKKLDI----FFRSSSLD 234

Query: 758  MNGCQIKINMANLTLLNYIGYLCNELFLCNVPSLVKAYIHVPVLSERLKEVGYRI--VKL 931
             N C  KI+  NL  L+Y        FL N  S+V A I +     +  E+   +  ++L
Sbjct: 235  RNSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIEL 294

Query: 932  LKGLENVNSVKISTRTIEFLFSADNVLDRFPLFQNLTCLELSMKIKNRTVVPLALMELLR 1111
               L +V S+++S +TI+ L  A + L   P F+NLT LE+     +  V    L ++LR
Sbjct: 295  FSRLGSVESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEVHFDDPSCEV----LADILR 350

Query: 1112 CSPNLQSLHLAEGLDLCICFR----------ENDLTSMPVPKCLLSCMKIVSFQNFHGHE 1261
             SP L+ LH+  G+ L  C R            D TS  +P C  S +K     +F G E
Sbjct: 351  KSPKLEFLHI-YGVHLVSCSRFSSGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDE 409

Query: 1262 TEICFLKYFLENALVLERMNIFLSKNTSGHLRNQREVKTQLQMLDRGSKDCVI 1420
             EI  +K+ LEN  +L  MNI+ +   S   +   +V+ QLQ L  GS  CVI
Sbjct: 410  AEIRLVKFLLENVTLLREMNIYCTGYLSKKSKKLADVRNQLQALGMGS--CVI 460


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  227 bits (579), Expect = 6e-57
 Identities = 165/447 (36%), Positives = 238/447 (53%), Gaps = 5/447 (1%)
 Frame = +2

Query: 101  ISVLPDCILQHILSFLPTKDAVATCILSKRWKFLWTSVPNIDFDDALLYTSEMNGWFPLE 280
            I  LPD +L+HILSFL T+ AV T ILSK+W  LW S  N+ F           G    +
Sbjct: 28   IGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFF----------GLKSPK 77

Query: 281  VSCFMNFVERVLLLRDASAMKKFRLSCRVCFSASRVHAWISAAVMHNIQELDLCLF-VEK 457
               FM+FV+RVL LR  S + +F LSC V    SRV  WISAAV  N+++L L L   E 
Sbjct: 78   RKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEA 137

Query: 458  PFMLPLCVFDSKSLTVLKIEMNCVLELPTCISFPSLRILHLCLVTFLNDYSTHKLFSSCP 637
             F+LP C+F+ ++LT L+I M  +L+LP+ IS   L+IL+L  V F +D+ST +LF S P
Sbjct: 138  SFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQLF-SLP 196

Query: 638  VLQELAILDCEWMNLKSVAISIPTLKSLTIDDLPYFGSDDMNGCQIKINMANLTLLNYIG 817
             L EL I +C WMNL +V+IS P L+SL I +        + GC ++I   +L     IG
Sbjct: 197  NLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADFTIIG 256

Query: 818  YLCNELFLCNVPSLVKAYIHVPVLSERLKEVGYRIVKLLKGLENVNSVKISTRTIEFLFS 997
             L N+  L    S+V+  I +   +++ ++  YR  KLL+G+ +  S+ ++T  ++ L  
Sbjct: 257  TLSNDYCLYE-SSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVDVLDD 315

Query: 998  ADNVLDRFPL-FQNLTCLELSMKIKNRTVVPLALMELLRCSPNLQSLHL-AEGLDLCICF 1171
            A  +L  FPL F+NLT L    +  N  +       ++  SP+L +L      +      
Sbjct: 316  APELL-AFPLEFRNLTSLLFESEESN--LHSDGFWHIIYNSPHLIALQFYGVSMPKVPSN 372

Query: 1172 RENDLTSMPVPKCLLSCMKIVSFQNFHGHETEICFLKYFLENALVLERMNIFLSKNT--S 1345
               D T  P P C LSC+K +    F G E E+  + + L+NA  LE M+I  S +    
Sbjct: 373  CREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIYSGSARRD 432

Query: 1346 GHLRNQREVKTQLQMLDRGSKDCVITF 1426
              +    E+  QL  L R S+   I F
Sbjct: 433  QGVDKTNEIHQQLLALPRWSEIGNINF 459


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  217 bits (552), Expect = 9e-54
 Identities = 164/459 (35%), Positives = 242/459 (52%), Gaps = 14/459 (3%)
 Frame = +2

Query: 95   DKISVLPDCILQHILSFLPTKDAVATCILSKRWKFLWTSVPNIDFDDALLYTSEMNGWFP 274
            D IS LPD +L HILSFLPTK AV T ILSKRW++LW SVP +DFDD L           
Sbjct: 10   DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69

Query: 275  LEVSCFMNFVERVLLLRDASAMKKFRLSCRVCFSASRVHAWISAAVMHNIQELDLCLFVE 454
              +  F NFV+ VL   + S +KKFRL  R   +   V++WI  A+   +QELDL L ++
Sbjct: 70   ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDN-NLDSVYSWICIALERRVQELDLHLLID 128

Query: 455  KPFMLPLCVFDSKSLTVLKIEMNCVLELPTCISFPSLRILHLCLVTFLNDYSTHKLFSSC 634
                LP   F  K+L V+K+     L++PT +  PSL+ LHL  V + +D S  KL S C
Sbjct: 129  WRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGC 188

Query: 635  PVLQELAILDCEWMNLKSVAISIPTLKSLTI----DDLPYFGSDDMNGCQIKINMANLTL 802
            PVL+EL I   E  N   V +S P+LK L I    D   +    +    ++ ++  NL  
Sbjct: 189  PVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEY 248

Query: 803  LNYIGYLCNELFLCNVPSLVKAYIHVPVLSERLKE------VGYR--IVKLLKGLENVNS 958
            L+   YL  + F+ ++PSLVKA+I V   SE  +E      + Y   I +LL  + NV  
Sbjct: 249  LSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVKC 308

Query: 959  VKISTRTIEFLFSADNVLD-RFPLFQNLTCLE-LSMKIKNRTVVPLALMELLRCSPNLQS 1132
            + ++  T++ L  +  + D + P F N+T LE L +   N   +P      L  SPNL++
Sbjct: 309  LSLTGVTLDSL--SGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLP----NFLHSSPNLEA 362

Query: 1133 LHLAEGLDLCICFRENDLTSMPVPKCLLSCMKIVSFQNFHGHETEICFLKYFLENALVLE 1312
            L +  G    +   E  L  + VP CL+  +K +  +   G + E+  ++Y L+NA VL+
Sbjct: 363  LVIETGYTNEL-IPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQ 421

Query: 1313 RMNIFLSKNTSGHLRNQREVKTQLQMLDRGSKDCVITFS 1429
            +M I   ++   ++  +  V  +L  L RGS+ C +  S
Sbjct: 422  QMTIDCHES---YMDQEFCVCKKLLGLPRGSRSCFVVSS 457


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  199 bits (505), Expect = 2e-48
 Identities = 142/431 (32%), Positives = 215/431 (49%), Gaps = 3/431 (0%)
 Frame = +2

Query: 101  ISVLPDCILQHILSFLPTKDAVATCILSKRWKFLWTSVPNIDFDDALLYTSEMNGWFPLE 280
            I+ LPD +LQHILSFL TKDAV T ILS++W+ LW S+ N++F            +F  +
Sbjct: 40   INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQC---------YFKAK 90

Query: 281  VSCFMNFVERVLLLRDASAMKKFRLSCRVCFSASRVHAWISAAVMHNIQELDLCLF---V 451
               FMN VERVLLLRD+S ++KF LSC +   A+R   W+SAAV  N++EL +  +    
Sbjct: 91   RKIFMNSVERVLLLRDSSNIEKFTLSCGI-DDATRTRTWVSAAVNRNVKELCVNFYEGGE 149

Query: 452  EKPFMLPLCVFDSKSLTVLKIEMNCVLELPTCISFPSLRILHLCLVTFLNDYSTHKLFSS 631
             + F+ PLC+F   +LT LKI  + VL L + IS P L+IL L  V F ++ ST ++  +
Sbjct: 150  SESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQIL-N 208

Query: 632  CPVLQELAILDCEWMNLKSVAISIPTLKSLTIDDLPYFGSDDMNGCQIKINMANLTLLNY 811
               L++L I   +W NLK++ IS P L+SL I ++        + C + I    LT  ++
Sbjct: 209  LRTLEKLKISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALTFFSF 268

Query: 812  IGYLCNELFLCNVPSLVKAYIHVPVLSERLKEVGYRIVKLLKGLENVNSVKISTRTIEFL 991
             G   ++  L    SLV+AY HV    ER +E+ +R  K + GL  V  + +        
Sbjct: 269  SGGFWDDYCLFKSSSLVEAYFHVYGCYERSREIAHRAYKHIVGLSTVKHLTL-------- 320

Query: 992  FSADNVLDRFPLFQNLTCLELSMKIKNRTVVPLALMELLRCSPNLQSLHLAEGLDLCICF 1171
                                                     +P++  + L+E  +L    
Sbjct: 321  -----------------------------------------TPDVLKIELSE--ELPTNC 337

Query: 1172 RENDLTSMPVPKCLLSCMKIVSFQNFHGHETEICFLKYFLENALVLERMNIFLSKNTSGH 1351
             ++D    PVP C  SC+K +  ++F G   E+  +   L+NA+ L+ M I  S   S  
Sbjct: 338  AKDDWILEPVPPCFQSCLKCIEIRDFGGLIDELDAVALLLKNAIALDDMVITCSTTGS-- 395

Query: 1352 LRNQREVKTQL 1384
               QR+++ QL
Sbjct: 396  -EGQRKIREQL 405


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
            F-box family-3 [Medicago truncatula]
          Length = 642

 Score =  195 bits (496), Expect = 3e-47
 Identities = 154/467 (32%), Positives = 244/467 (52%), Gaps = 8/467 (1%)
 Frame = +2

Query: 50   SDYKQQKLYQLQTVCDKISVLPDCILQHILSFLPTKDAVATCILSKRWKFLWTSVPNIDF 229
            +D  + + + +  + D IS LP+ +L HILS LPTKD V T IL+K+WK LWT +    F
Sbjct: 167  TDVHKIQRHNMDDMIDMISDLPEAVLLHILSLLPTKDVVRTSILAKKWKHLWTYLSAFHF 226

Query: 230  DDALLYTSEMNGWFPLEVSCFMNFVERVLLLRDASAMKKFRLSC-RVCFSASRVHAWISA 406
            +               + +C ++ V R  L+  ++ +++  +   R      +V + IS+
Sbjct: 227  ETFRRLNESSLQNQKNKANCLLDLVGR--LMHKSTRIERLGVQIFRSSIDTDKVSSIISS 284

Query: 407  AVMHNIQELDLCLFVEKP-FMLPLCVFDSKSLTVLKIEMNCVLELPTCISFPSLRILHLC 583
            A  H +Q LDL L      F+LP      +SL  L++ +   L +P+ I FP L+ L + 
Sbjct: 285  AANHKLQYLDLSLGDRNDNFVLPHSFPAFESLNELRLGLQFTLHIPSGICFPILKTLVVT 344

Query: 584  LVTFLNDYSTHKLFSSCPVLQELAILDCEWMNLKSVAISIPTLKSLTIDDLPYFGSDDMN 763
             VTF N+ S  +LFS CPVLQEL + +C W ++  +++SI TL+ LTI  L      D +
Sbjct: 345  NVTFANENSAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYD-H 403

Query: 764  GCQIKINMANLTLLNYIGYLCNELFLCNVPSLVKAYIHVPVLSERLKEVGYRI-VKLLKG 940
              ++KI+  NL  L  I     E+   N+ SLV A+I +  +    +    +  ++LLKG
Sbjct: 404  IMKLKIDAVNLLSLYCICNPIIEVIPVNLTSLVDAFIFLGYVYPHDEPYAAQCSIELLKG 463

Query: 941  LENVNSVKISTRTI-EFLFSADNV---LDRFPLFQNLTCLEL-SMKIKNRTVVPLALMEL 1105
            L +V S+K++   +  F  + DN+   L   P F NLT L + S+   N   +   +M++
Sbjct: 464  LGSVKSLKLNDIILMSFYHTLDNLHLHLLPLPTFYNLTHLYVCSVSPGNACAL---VMDI 520

Query: 1106 LRCSPNLQSLHLAEGLDLCICFRENDLTSMPVPKCLLSCMKIVSFQNFHGHETEICFLKY 1285
            LR +P L+ L +  G+ L      +DL    +P C  S +K + F NFHG+  EI F+ +
Sbjct: 521  LRKTPKLEDLTI-PGVVLNY-LDSDDLILNSLPCCFKSSLKRLCFLNFHGNVHEIKFVTF 578

Query: 1286 FLENALVLERMNIFLSKNTSGHLRNQREVKTQLQMLDRGSKDCVITF 1426
             LENA  LE + I  S++ S  +    +V+ QLQ  D   + CVI F
Sbjct: 579  ILENAPYLEEIKIHCSRHLSADMEKLDDVRNQLQ--DVCLESCVIKF 623


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