BLASTX nr result

ID: Panax21_contig00011498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011498
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633372.1| PREDICTED: uncharacterized protein At1g10890...    91   2e-16
ref|XP_002271027.2| PREDICTED: uncharacterized protein At1g10890...    91   2e-16
emb|CBI23816.3| unnamed protein product [Vitis vinifera]               91   2e-16
ref|XP_002534258.1| Arginine/serine-rich coiled coil protein, pu...    87   3e-15
ref|XP_003633371.1| PREDICTED: uncharacterized protein At1g10890...    77   3e-12

>ref|XP_003633372.1| PREDICTED: uncharacterized protein At1g10890 isoform 3 [Vitis
           vinifera]
          Length = 286

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 44/64 (68%), Positives = 57/64 (89%), Gaps = 2/64 (3%)
 Frame = +2

Query: 2   RRKSRSPTPRRHKSRTPTPRRHKRQRSRSTSLSPINK--SPSIGSLERKNASEKLKIDEE 175
           RRKSRSP+PR  KSR+PTPRR+KRQ+S +TSLSP++K  SPS+GS++ KNASEK++ +EE
Sbjct: 54  RRKSRSPSPRHRKSRSPTPRRYKRQKSSATSLSPMHKSSSPSLGSVDHKNASEKVRKEEE 113

Query: 176 EKKR 187
           EKKR
Sbjct: 114 EKKR 117


>ref|XP_002271027.2| PREDICTED: uncharacterized protein At1g10890 isoform 1 [Vitis
           vinifera]
          Length = 275

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 44/64 (68%), Positives = 57/64 (89%), Gaps = 2/64 (3%)
 Frame = +2

Query: 2   RRKSRSPTPRRHKSRTPTPRRHKRQRSRSTSLSPINK--SPSIGSLERKNASEKLKIDEE 175
           RRKSRSP+PR  KSR+PTPRR+KRQ+S +TSLSP++K  SPS+GS++ KNASEK++ +EE
Sbjct: 51  RRKSRSPSPRHRKSRSPTPRRYKRQKSSATSLSPMHKSSSPSLGSVDHKNASEKVRKEEE 110

Query: 176 EKKR 187
           EKKR
Sbjct: 111 EKKR 114


>emb|CBI23816.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 44/64 (68%), Positives = 57/64 (89%), Gaps = 2/64 (3%)
 Frame = +2

Query: 2   RRKSRSPTPRRHKSRTPTPRRHKRQRSRSTSLSPINK--SPSIGSLERKNASEKLKIDEE 175
           RRKSRSP+PR  KSR+PTPRR+KRQ+S +TSLSP++K  SPS+GS++ KNASEK++ +EE
Sbjct: 54  RRKSRSPSPRHRKSRSPTPRRYKRQKSSATSLSPMHKSSSPSLGSVDHKNASEKVRKEEE 113

Query: 176 EKKR 187
           EKKR
Sbjct: 114 EKKR 117


>ref|XP_002534258.1| Arginine/serine-rich coiled coil protein, putative [Ricinus
           communis] gi|223525629|gb|EEF28124.1|
           Arginine/serine-rich coiled coil protein, putative
           [Ricinus communis]
          Length = 281

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/64 (68%), Positives = 55/64 (85%), Gaps = 2/64 (3%)
 Frame = +2

Query: 2   RRKSRSPTPRRHKSRTPTPRRHKRQRSRSTSLSPINK--SPSIGSLERKNASEKLKIDEE 175
           RRKSRSPTPRR KSR+PTPRR+KRQRSRS+SLSP  K  SPS+ S+ERK  ++KL+ +EE
Sbjct: 56  RRKSRSPTPRRRKSRSPTPRRYKRQRSRSSSLSPTRKSSSPSLVSVERKVVNKKLREEEE 115

Query: 176 EKKR 187
           E+K+
Sbjct: 116 EEKK 119


>ref|XP_003633371.1| PREDICTED: uncharacterized protein At1g10890 isoform 2 [Vitis
           vinifera]
          Length = 259

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 7/69 (10%)
 Frame = +2

Query: 2   RRKSRSPTP-----RRHKSRTPTPRRHKRQRSRSTSLSPINKS--PSIGSLERKNASEKL 160
           R +SRSP       R  KSR+PTPRR+KRQ+S +TSLSP++KS  PS+GS++ KNASEK+
Sbjct: 30  RDRSRSPYSSYSHSRHRKSRSPTPRRYKRQKSSATSLSPMHKSSSPSLGSVDHKNASEKV 89

Query: 161 KIDEEEKKR 187
           + +EEEKKR
Sbjct: 90  RKEEEEKKR 98


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