BLASTX nr result

ID: Panax21_contig00010994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010994
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    87   2e-15
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002516806.1| conserved hypothetical protein [Ricinus comm...    80   1e-13

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
 Frame = +1

Query: 1   KSNSWRRIRDMGTLHCCI--QKQAVHLRGSLHWLMQMFSSSDQGHVVYKDNVILSFNLAD 174
           KSN WR I+D   L C +  +       G+LHWL++  +         K  V++SF+L++
Sbjct: 187 KSNIWRTIQD---LRCSVLLEGPGTLANGALHWLVRQENGGS------KKCVMVSFDLSE 237

Query: 175 EKLQEICP------PDEGWSIRQSRLGVLGDSLCVCSYDGSCVRLWIMREYNMKASWTKV 336
           EK  E+ P       D  W +    L VLGD LC+ S+ G     WIM+EY+ +ASWT+ 
Sbjct: 238 EKFLEMVPLRGLTEDDSSWDLE---LKVLGDWLCLYSHYGLICEAWIMKEYSSEASWTRF 294

Query: 337 ITM---TMPTFSHYAMPICISRKGEVAMLVDGKDLVMYNLKEHSYRRVVIGDSINSFNAA 507
           +     ++P   ++   + +++ G V   +DG+++V YN  E + R  +I    + F + 
Sbjct: 295 LRFNGESIPGGKYWFRLLWVTKNGNVVYDLDGREVVFYNPDEDTARPFIIYHEGDWFEST 354

Query: 508 FYVESLI 528
            Y+ESL+
Sbjct: 355 AYIESLV 361


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
 Frame = +1

Query: 1   KSNSWRRIRDMGTLHCCIQKQAVHLRGSLHWLMQMFSSSDQGHVVYKDNVILSFNLADEK 180
           K   WRR+ D G L         H+ G L W +    S            I++F+LA E 
Sbjct: 266 KGECWRRLEDFG-LGLPYDVSGKHVDGKLCWPVMPEGSIGSAWS------IVAFDLAQEM 318

Query: 181 LQEICPPDEGWSIRQSRLGVLGDSLCV-CSYDGSCVRLWIMREYNMKASWTKVITMTM-- 351
            +E+  PD G    +  LGVL   LCV C+Y G    +W+++E+ ++ SWTK+ ++    
Sbjct: 319 FEEVVQPDYGAVGYERVLGVLQGWLCVMCNYQGVRADVWVLKEFGVRDSWTKLFSIPYLD 378

Query: 352 -PTFSHYAMPICISRKGEVAMLVDGKDLVMYNLKEHSYRRVVIGDSINSFNAAFYVESLI 528
            P + HY++P+CI   GEV +L     LV+YN K  ++R  V+  + +   A  Y++SL+
Sbjct: 379 DPLWFHYSVPLCIDVGGEV-LLEYKSVLVIYNPKHGTFRYPVMNGASSCIEADVYIQSLV 437


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
 Frame = +1

Query: 1   KSNSWRRIRDMGTLHCCIQKQ--AVHLRGSLHWLMQMFSSSDQGHVVYKDNVILSFNLAD 174
           K N WR I++   LHC ++ Q  A+ L G LHWL+   +            +I+S +LA+
Sbjct: 182 KGNRWRAIQN---LHCNVRFQGSAIALNGILHWLVDQLNEG---------LMIVSLDLAE 229

Query: 175 EK-LQEICPPD---EGWSIRQSRLGVLGDSLCVCSYDGSC-VRLWIMREYNMKASWTKVI 339
           EK L+ +  PD   E W    + L VLGDSL VCS   +     W ++ Y  KASW K+ 
Sbjct: 230 EKFLEMVVLPDYVTENWG---TELKVLGDSLSVCSSSHTTNFEAWTVKGYGSKASWLKLF 286

Query: 340 TMT---MPTFSHYAMPICISRKGEVAMLVDGKDLVMYNLKEHSYRRVVIGDSINSFNAAF 510
           +     +P   ++   + +++ G V +  +G ++++YN KE + ++  + ++ + F A  
Sbjct: 287 SFNSDPLPGCKYWLNVLWVAKNGNVLLNYEGLEIIVYNPKEQTLKQFNVPNNWHWFEAIT 346

Query: 511 YVESLI 528
           Y+ESL+
Sbjct: 347 YIESLV 352


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 19/197 (9%)
 Frame = +1

Query: 1   KSNSWRRIRDMGTLHCCIQKQ---AVHLRG-------SLHWLMQMFSSSDQGHVVYKDNV 150
           K++ W++I D+      + KQ    +H RG       +LHW++       Q   +   + 
Sbjct: 191 KNDKWKKIEDLPICLKLLSKQFFHVLHRRGYGVFAGHALHWIIP------QRRQLGIRDC 244

Query: 151 ILSFNLADEKLQEICPPD---EGWSIRQSRLGVLGDSLCV-CSYDGSCVRLWIMREYNMK 318
           +L F++ ++K  E+  P+   +G S  Q  +GVL  +LCV C+Y+  CV +W+MREY MK
Sbjct: 245 VLGFDIRNDKFFELPQPNYESKGMSF-QVDVGVLEGNLCVMCNYEYVCVDVWVMREYGMK 303

Query: 319 ASWTKVITMT----MPTFSHYAMPICISRK-GEVAMLVDGKDLVMYNLKEHSYRRVVIGD 483
            SW K+ ++     +  F  +  P+  S+  G+V + V+ + LV Y+ K    + V I  
Sbjct: 304 ESWCKMFSVQGIKWIGAFM-FLRPLIYSKDGGKVLLEVNDEKLVWYDWKNKHAKVVKIRG 362

Query: 484 SINSFNAAFYVESLIRL 534
             NS+ +  YVESL+R+
Sbjct: 363 GPNSYGSEMYVESLVRI 379


>ref|XP_002516806.1| conserved hypothetical protein [Ricinus communis]
           gi|223543894|gb|EEF45420.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 403

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 4/180 (2%)
 Frame = +1

Query: 1   KSNSWRRIRDMGTLHCCIQKQAVHLRGSLHWLMQMFSSSDQGHVVYKDNVILSFNLADEK 180
           +++SWR+I D      C     V LRG++HW+       D  + V     I +F++  E 
Sbjct: 225 RTDSWRKI-DNFCHDFCFHHSGVFLRGAIHWMAINREEVDDEYYV-----ISAFDMEKEL 278

Query: 181 LQEICPPDEGWSIRQSRLGVLGDSLCVC-SYDGSCVRLWIMREYNMKASWTKVITMTMPT 357
             ++  PD      +  LG L + LCV  S++      W+M EY +  SWT++      +
Sbjct: 279 FWDMPAPDMEDDDSEFMLGTLNEDLCVLKSFNEMHNDFWVMHEYGVGESWTRLTI----S 334

Query: 358 FSHYAM-PICISRKGEVAMLVDGKDLVMYNLKEHSYRRVVI-GDSIN-SFNAAFYVESLI 528
            S+  M P+C+++ GE  + +DG+ LV YNL+ ++Y+ +V+ G  +   F A  Y+E+LI
Sbjct: 335 LSYICMKPLCLAKNGEALLDIDGR-LVQYNLENNTYKELVVHGIPVGVGFEADTYIETLI 393


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