BLASTX nr result

ID: Panax21_contig00010772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010772
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   219   4e-55
ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|2...   219   5e-55
gb|ABK94153.1| unknown [Populus trichocarpa]                          219   5e-55
ref|XP_002518112.1| conserved hypothetical protein [Ricinus comm...   216   3e-54
ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycin...   215   5e-54

>ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial isoform 1 [Vitis vinifera]
          Length = 125

 Score =  219 bits (558), Expect = 4e-55
 Identities = 104/125 (83%), Positives = 110/125 (88%)
 Frame = +1

Query: 79  MAGRLSHVASRIMGGNGVVXXXXXXXXXXXXGMGLPVGKHIVPNKPLSVNDELIWDNGTA 258
           MAGRLS+VASRIMGG+GVV            GMGLPVGKHIVPNKPL VNDELIWDNGT 
Sbjct: 1   MAGRLSNVASRIMGGSGVVSRSVASSLPLRSGMGLPVGKHIVPNKPLPVNDELIWDNGTP 60

Query: 259 FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKIPFAPKVYPYDNLRVE 438
           FPEPCIDRIA+TVGKYEALAW+CGGLSFFASLGL+AVWNDKASKIPF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIAETVGKYEALAWMCGGLSFFASLGLLAVWNDKASKIPFTPRVYPYDNLRVE 120

Query: 439 LGGEP 453
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|222871151|gb|EEF08282.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  219 bits (557), Expect = 5e-55
 Identities = 104/125 (83%), Positives = 109/125 (87%)
 Frame = +1

Query: 79  MAGRLSHVASRIMGGNGVVXXXXXXXXXXXXGMGLPVGKHIVPNKPLSVNDELIWDNGTA 258
           MAGRLS+VASRIMGGNGVV            GMGLPVGKHIVP+KP+SVNDEL WDNGTA
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLRSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 259 FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKIPFAPKVYPYDNLRVE 438
           FPEPCIDRIADTVGKYEALAWLCGGL FFASLGL+ VWNDKAS IPFAPKVYPYDNL+VE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVE 120

Query: 439 LGGEP 453
           LGGEP
Sbjct: 121 LGGEP 125


>gb|ABK94153.1| unknown [Populus trichocarpa]
          Length = 125

 Score =  219 bits (557), Expect = 5e-55
 Identities = 104/125 (83%), Positives = 109/125 (87%)
 Frame = +1

Query: 79  MAGRLSHVASRIMGGNGVVXXXXXXXXXXXXGMGLPVGKHIVPNKPLSVNDELIWDNGTA 258
           MAGRLS+VASRIMGGNGVV            GMGLPVGKHIVP+KP+SVNDEL WDNGTA
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLSSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 259 FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKIPFAPKVYPYDNLRVE 438
           FPEPCIDRIADTVGKYEALAWLCGGL FFASLGL+ VWNDKAS IPFAPKVYPYDNL+VE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVE 120

Query: 439 LGGEP 453
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_002518112.1| conserved hypothetical protein [Ricinus communis]
           gi|223542708|gb|EEF44245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score =  216 bits (550), Expect = 3e-54
 Identities = 102/124 (82%), Positives = 108/124 (87%)
 Frame = +1

Query: 82  AGRLSHVASRIMGGNGVVXXXXXXXXXXXXGMGLPVGKHIVPNKPLSVNDELIWDNGTAF 261
           AGRLS+VASRIMGGNGVV            GMGLPVGKHIVP+KPL VN+EL+WDNGT F
Sbjct: 3   AGRLSNVASRIMGGNGVVSRSIGSSLRLRSGMGLPVGKHIVPDKPLPVNEELVWDNGTPF 62

Query: 262 PEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKIPFAPKVYPYDNLRVEL 441
           PEPCIDRIADTVGKYEALAWLCGGLSFFASLGL+AVWNDKASKIP+ PKVYPYDNLR EL
Sbjct: 63  PEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPYVPKVYPYDNLRAEL 122

Query: 442 GGEP 453
           GGEP
Sbjct: 123 GGEP 126


>ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycine max]
           gi|255626255|gb|ACU13472.1| unknown [Glycine max]
          Length = 125

 Score =  215 bits (548), Expect = 5e-54
 Identities = 101/125 (80%), Positives = 109/125 (87%)
 Frame = +1

Query: 79  MAGRLSHVASRIMGGNGVVXXXXXXXXXXXXGMGLPVGKHIVPNKPLSVNDELIWDNGTA 258
           MAGRL++ ASRI+GGNGVV            GMGLPVGKH VP+KPL +N+EL+WDNGTA
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 259 FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKIPFAPKVYPYDNLRVE 438
           FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGL+AVWNDKASKIPF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVE 120

Query: 439 LGGEP 453
           LGGEP
Sbjct: 121 LGGEP 125


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