BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010684
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   164   5e-39
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun...   162   2e-38
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...   160   1e-37
gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase s...   159   3e-37
sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carbo...   159   3e-37

>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/108 (75%), Positives = 95/108 (87%), Gaps = 2/108 (1%)
 Frame = -1

Query: 319 MASSMVSTAAV--VGRTTPAQASMVAPFTGLKSVSAFPATRKNADITTIANNGGRVSCMK 146
           MASS+VS+AAV  V R +PAQASMVAPFTGLKS SAFP TRK+ADIT++A+NGGRV CM+
Sbjct: 1   MASSIVSSAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQ 60

Query: 145 VWPTEGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGF 2
           VWP  G KKFETLSYLPPL+RE+L+KE+EYLLR N +PCLEFEL+ GF
Sbjct: 61  VWPPIGKKKFETLSYLPPLSREELLKEIEYLLRMNWVPCLEFELEKGF 108


>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
           curcas]
          Length = 181

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/108 (74%), Positives = 91/108 (84%), Gaps = 2/108 (1%)
 Frame = -1

Query: 319 MASSMVSTAAV--VGRTTPAQASMVAPFTGLKSVSAFPATRKNADITTIANNGGRVSCMK 146
           MASSM+STA V  + R +PAQA+MVAPFTGLKS + FPA +   DIT+IA NGGRV CMK
Sbjct: 1   MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIAGNGGRVQCMK 60

Query: 145 VWPTEGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGF 2
           VWPT+G+KKFETLSYLPPLTREQL KEVEYLLRS  +PCLEFEL+ GF
Sbjct: 61  VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGF 108


>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
           carboxylase small chain, chloroplast precursor, putative
           [Ricinus communis]
          Length = 185

 Score =  160 bits (404), Expect = 1e-37
 Identities = 83/109 (76%), Positives = 90/109 (82%), Gaps = 3/109 (2%)
 Frame = -1

Query: 319 MASSMVSTAAV--VGRTTPAQASMVAPFTGLKSVSAFPATRK-NADITTIANNGGRVSCM 149
           MASSM+STA V  + R +PAQASMVAPFTGLKS SAFP TRK N DITT+ANNGGRV CM
Sbjct: 1   MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60

Query: 148 KVWPTEGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGF 2
           +VWP  G KKFETLSYLP LTREQL KEVEYLLR   +PCLEFEL+ GF
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGF 109


>gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
           [Mesembryanthemum crystallinum]
          Length = 180

 Score =  159 bits (401), Expect = 3e-37
 Identities = 77/104 (74%), Positives = 89/104 (85%)
 Frame = -1

Query: 313 SSMVSTAAVVGRTTPAQASMVAPFTGLKSVSAFPATRKNADITTIANNGGRVSCMKVWPT 134
           +SM+S AAVVGRTTPAQASMVAPFTGLKSVSAFP T+K+ DIT+IA+NGGRV CM+VWP 
Sbjct: 2   ASMMSNAAVVGRTTPAQASMVAPFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWPP 61

Query: 133 EGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGF 2
            G KKFETLSYLPPL+ E L+KEV+YLL +  +PCLEFE   GF
Sbjct: 62  LGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGF 105


>sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
           chloroplastic; Short=RuBisCO small subunit 2; Flags:
           Precursor gi|304444|gb|AAA03694.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Mesembryanthemum crystallinum]
          Length = 180

 Score =  159 bits (401), Expect = 3e-37
 Identities = 77/104 (74%), Positives = 89/104 (85%)
 Frame = -1

Query: 313 SSMVSTAAVVGRTTPAQASMVAPFTGLKSVSAFPATRKNADITTIANNGGRVSCMKVWPT 134
           +SM+S AAVVGRTTPAQASMVAPFTGLKSVSAFP T+K+ DIT+IA+NGGRV CM+VWP 
Sbjct: 2   ASMMSNAAVVGRTTPAQASMVAPFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWPP 61

Query: 133 EGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGF 2
            G KKFETLSYLPPL+ E L+KEV+YLL +  +PCLEFE   GF
Sbjct: 62  LGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGF 105