BLASTX nr result

ID: Panax21_contig00010569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010569
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha...    67   6e-17
ref|XP_002305399.1| predicted protein [Populus trichocarpa] gi|2...    69   9e-16
gb|ABK93654.1| unknown [Populus trichocarpa]                           69   9e-16
ref|NP_001241523.1| uncharacterized protein LOC100777962 [Glycin...    64   2e-15
ref|XP_003543944.1| PREDICTED: biotin carboxyl carrier protein o...    62   2e-15

>gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha curcas]
          Length = 270

 Score = 67.4 bits (163), Expect(2) = 6e-17
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 388 LPAPAKSSDSSHPPLKYPMAGTFYRSPAPGEPPF 489
           LP PAK+S SSHPPLK PMAGTFYR+PAPGEPPF
Sbjct: 182 LPPPAKTSSSSHPPLKCPMAGTFYRNPAPGEPPF 215



 Score = 44.7 bits (104), Expect(2) = 6e-17
 Identities = 22/34 (64%), Positives = 27/34 (79%), Gaps = 2/34 (5%)
 Frame = +2

Query: 200 SELQLKQFGCKLTIRKKEALK--PEASAVVTMPP 295
           +ELQLKQ GC+L IRKKEAL+  P A+ V+ MPP
Sbjct: 120 TELQLKQLGCQLIIRKKEALQQPPPAAPVIAMPP 153


>ref|XP_002305399.1| predicted protein [Populus trichocarpa] gi|222848363|gb|EEE85910.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score = 68.6 bits (166), Expect(2) = 9e-16
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 388 LPAPAKSSDSSHPPLKYPMAGTFYRSPAPGEPPF 489
           LP PAK+S SSHPPLK PMAGTFYRSPAPGEPPF
Sbjct: 193 LPPPAKASSSSHPPLKCPMAGTFYRSPAPGEPPF 226



 Score = 39.7 bits (91), Expect(2) = 9e-16
 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
 Frame = +2

Query: 134 DICVCIGFRPRVISFVVSKMVNS----ELQLKQFGCKLTIRKKEALKPEASAVVTMP--- 292
           D+     F  +V   V  K+V+S    ELQLKQ GC+L IRKKEAL+    A   +P   
Sbjct: 108 DVSSISAFMTQVSELV--KLVDSRDITELQLKQSGCELIIRKKEALQQSEPAAPVLPMQS 165

Query: 293 --PHMYF 307
             PH  F
Sbjct: 166 PYPHAMF 172


>gb|ABK93654.1| unknown [Populus trichocarpa]
          Length = 251

 Score = 68.6 bits (166), Expect(2) = 9e-16
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 388 LPAPAKSSDSSHPPLKYPMAGTFYRSPAPGEPPF 489
           LP PAK+S SSHPPLK PMAGTFYRSPAPGEPPF
Sbjct: 163 LPPPAKASSSSHPPLKCPMAGTFYRSPAPGEPPF 196



 Score = 39.7 bits (91), Expect(2) = 9e-16
 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
 Frame = +2

Query: 134 DICVCIGFRPRVISFVVSKMVNS----ELQLKQFGCKLTIRKKEALKPEASAVVTMP--- 292
           D+     F  +V   V  K+V+S    ELQLKQ GC+L IRKKEAL+    A   +P   
Sbjct: 78  DVSSISAFMTQVSELV--KLVDSRDITELQLKQSGCELIIRKKEALQQSEPAAPVLPMQS 135

Query: 293 --PHMYF 307
             PH  F
Sbjct: 136 PYPHAMF 142


>ref|NP_001241523.1| uncharacterized protein LOC100777962 [Glycine max]
           gi|255645677|gb|ACU23332.1| unknown [Glycine max]
          Length = 280

 Score = 64.3 bits (155), Expect(2) = 2e-15
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +1

Query: 388 LPAPAKSSDSSHPPLKYPMAGTFYRSPAPGEPPF 489
           LP+P K+S SSHPPLK PMAGTFYRSPAPGEP F
Sbjct: 192 LPSPGKASTSSHPPLKCPMAGTFYRSPAPGEPAF 225



 Score = 42.4 bits (98), Expect(2) = 2e-15
 Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = +2

Query: 80  SSK*QIVHTNVFTLYMFADICVCIGFRPRVISFVVSKMVNS----ELQLKQFGCKLTIRK 247
           SSK   VH    +     D    I F  +V   V  K+V+S    ELQLKQ  C+L IRK
Sbjct: 88  SSKENQVHNGKLSDTTIPDEASIIAFMSQVSDLV--KLVDSRDIVELQLKQSDCELMIRK 145

Query: 248 KEALKPEASAVVTMPPHMY 304
           KEAL+P        PP  Y
Sbjct: 146 KEALQPPPIIAPAPPPMHY 164


>ref|XP_003543944.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 2, chloroplastic-like [Glycine max]
          Length = 276

 Score = 62.0 bits (149), Expect(2) = 2e-15
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = +1

Query: 379 VTELPAPAKSSDSSHPPLKYPMAGTFYRSPAPGEPPF 489
           V  LP+PAK+  SSHP LK PMAGTFYRSPAPGEP F
Sbjct: 185 VPALPSPAKAGTSSHPTLKCPMAGTFYRSPAPGEPAF 221



 Score = 44.7 bits (104), Expect(2) = 2e-15
 Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
 Frame = +2

Query: 80  SSK*QIVHTNVFTLYMFADICVCIGFRPRVISFVVSKMVNS----ELQLKQFGCKLTIRK 247
           SSK + VH    +     D    I F  +V   V  K+V+S    ELQLKQ  C+L IRK
Sbjct: 86  SSKEKEVHNGKLSGGTIPDDASIIAFMSQVSDLV--KLVDSRDIVELQLKQSDCELMIRK 143

Query: 248 KEALKPEASAVVTMPPHMY 304
           KEAL+P      T PP  Y
Sbjct: 144 KEALQPPPVIAPTSPPMHY 162


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