BLASTX nr result

ID: Panax21_contig00010376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010376
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36655.1| C3HL domain class transcription factor [Malus x d...    69   5e-10
ref|XP_003535166.1| PREDICTED: zinc finger CCCH domain-containin...    67   2e-09
ref|XP_002526718.1| nucleic acid binding protein, putative [Rici...    66   3e-09
ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [...    65   4e-09

>gb|ADL36655.1| C3HL domain class transcription factor [Malus x domestica]
          Length = 736

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = -1

Query: 142 SQLSVEMEDSFSSLLELAANNDFEAFKSLVEQNSSAVDEIGLWYVRK 2
           + L+VE ED+F+SLLELAANND E+FK  +EQ+ SA+DEIGLWY R+
Sbjct: 32  NHLTVETEDAFASLLELAANNDIESFKRSIEQDPSAIDEIGLWYCRQ 78


>ref|XP_003535166.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Glycine max]
          Length = 819

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/47 (61%), Positives = 39/47 (82%)
 Frame = -1

Query: 142 SQLSVEMEDSFSSLLELAANNDFEAFKSLVEQNSSAVDEIGLWYVRK 2
           + L++E EDSF+SLLELAANND E FK ++E++ S VDE+GLWY R+
Sbjct: 112 NNLTIETEDSFASLLELAANNDVEGFKRMIERDPSCVDEVGLWYSRQ 158


>ref|XP_002526718.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533907|gb|EEF35632.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 728

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = -1

Query: 166 NKSNKQHTSQLSVEMEDSFSSLLELAANNDFEAFKSLVEQNSSAVDEIGLWYVRK 2
           ++S     + L+VE ED+F+SLLELAANND E FK  +E++ S VDEIGLWY R+
Sbjct: 24  SRSTNIDMNHLTVETEDTFASLLELAANNDIEGFKRTIERDPSCVDEIGLWYGRR 78


>ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|222854014|gb|EEE91561.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = -1

Query: 142 SQLSVEMEDSFSSLLELAANNDFEAFKSLVEQNSSAVDEIGLWYVRK 2
           + L+VE ED+F+SLLELAANND E FK  +E++ S VDEIGLWY RK
Sbjct: 32  NHLTVETEDTFASLLELAANNDVEGFKQSIERDLSCVDEIGLWYGRK 78


>ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type
           [Medicago truncatula] gi|355500172|gb|AES81375.1| Zinc
           finger CCCH domain-containing protein [Medicago
           truncatula]
          Length = 734

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -1

Query: 166 NKSNKQHT-SQLSVEMEDSFSSLLELAANNDFEAFKSLVEQNSSAVDEIGLWYVRK 2
           N   + HT + L++  EDSF+SLLELAANND E FK L+E +  +VDE+GLWY R+
Sbjct: 25  NSQLRNHTMNHLTISTEDSFASLLELAANNDVEGFKRLIEYDPMSVDEVGLWYGRR 80


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