BLASTX nr result

ID: Panax21_contig00010233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010233
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516399.1| protein transport protein sec23, putative [R...    65   4e-18
ref|XP_002268633.2| PREDICTED: protein transport protein SEC23-l...    64   3e-17
emb|CBI39378.3| unnamed protein product [Vitis vinifera]               64   3e-17
ref|XP_002885585.1| hypothetical protein ARALYDRAFT_479878 [Arab...    61   6e-17
ref|NP_189008.1| protein transport protein SEC23 [Arabidopsis th...    61   6e-17

>ref|XP_002516399.1| protein transport protein sec23, putative [Ricinus communis]
           gi|223544497|gb|EEF46016.1| protein transport protein
           sec23, putative [Ricinus communis]
          Length = 782

 Score = 65.1 bits (157), Expect(2) = 4e-18
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +1

Query: 430 YRKDDPSSFTLNPCFSLFLQLIFNLRRSQFVQI 528
           YRKDDPSSFTLNPCFSLF Q +FNLRRSQFVQ+
Sbjct: 580 YRKDDPSSFTLNPCFSLFPQFMFNLRRSQFVQV 612



 Score = 52.4 bits (124), Expect(2) = 4e-18
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 359 QEGFDATRWLDRNLIRLCSKFGD 427
           +EGFDATRWLDRNLIRLCSKFGD
Sbjct: 557 EEGFDATRWLDRNLIRLCSKFGD 579


>ref|XP_002268633.2| PREDICTED: protein transport protein SEC23-like [Vitis vinifera]
          Length = 785

 Score = 63.9 bits (154), Expect(2) = 3e-17
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +1

Query: 430 YRKDDPSSFTLNPCFSLFLQLIFNLRRSQFVQI 528
           YRKDDP+SFTLNPCFSLF Q +FNLRRSQFVQ+
Sbjct: 583 YRKDDPASFTLNPCFSLFPQFMFNLRRSQFVQV 615



 Score = 50.4 bits (119), Expect(2) = 3e-17
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = +2

Query: 359 QEGFDATRWLDRNLIRLCSKFGD 427
           +EGFDATRWLDR+LIRLCSKFGD
Sbjct: 560 EEGFDATRWLDRSLIRLCSKFGD 582


>emb|CBI39378.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 63.9 bits (154), Expect(2) = 3e-17
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +1

Query: 430 YRKDDPSSFTLNPCFSLFLQLIFNLRRSQFVQI 528
           YRKDDP+SFTLNPCFSLF Q +FNLRRSQFVQ+
Sbjct: 505 YRKDDPASFTLNPCFSLFPQFMFNLRRSQFVQV 537



 Score = 50.4 bits (119), Expect(2) = 3e-17
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = +2

Query: 359 QEGFDATRWLDRNLIRLCSKFGD 427
           +EGFDATRWLDR+LIRLCSKFGD
Sbjct: 482 EEGFDATRWLDRSLIRLCSKFGD 504


>ref|XP_002885585.1| hypothetical protein ARALYDRAFT_479878 [Arabidopsis lyrata subsp.
           lyrata] gi|297331425|gb|EFH61844.1| hypothetical protein
           ARALYDRAFT_479878 [Arabidopsis lyrata subsp. lyrata]
          Length = 769

 Score = 60.8 bits (146), Expect(2) = 6e-17
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 430 YRKDDPSSFTLNPCFSLFLQLIFNLRRSQFVQI 528
           YRKDDP+SFTLNP FSLF Q IFNLRRSQFVQ+
Sbjct: 567 YRKDDPASFTLNPYFSLFPQFIFNLRRSQFVQV 599



 Score = 52.4 bits (124), Expect(2) = 6e-17
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 359 QEGFDATRWLDRNLIRLCSKFGD 427
           +EGFDATRWLDRNLIRLCSKFGD
Sbjct: 544 EEGFDATRWLDRNLIRLCSKFGD 566


>ref|NP_189008.1| protein transport protein SEC23 [Arabidopsis thaliana]
           gi|9294523|dbj|BAB02785.1| protein transport protein
           Sec23 [Arabidopsis thaliana] gi|27754566|gb|AAO22730.1|
           putative transport protein [Arabidopsis thaliana]
           gi|28827624|gb|AAO50656.1| putative transport protein
           [Arabidopsis thaliana] gi|332643275|gb|AEE76796.1|
           protein transport protein SEC23 [Arabidopsis thaliana]
          Length = 765

 Score = 60.8 bits (146), Expect(2) = 6e-17
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 430 YRKDDPSSFTLNPCFSLFLQLIFNLRRSQFVQI 528
           YRKDDP+SFTLNP FSLF Q IFNLRRSQFVQ+
Sbjct: 563 YRKDDPASFTLNPYFSLFPQFIFNLRRSQFVQV 595



 Score = 52.4 bits (124), Expect(2) = 6e-17
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 359 QEGFDATRWLDRNLIRLCSKFGD 427
           +EGFDATRWLDRNLIRLCSKFGD
Sbjct: 540 EEGFDATRWLDRNLIRLCSKFGD 562


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