BLASTX nr result

ID: Panax21_contig00010173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010173
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]      86   3e-15
ref|XP_002438240.1| hypothetical protein SORBIDRAFT_10g010346 [S...    76   3e-12
ref|XP_003581310.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    76   3e-12
ref|NP_001061399.2| Os08g0263600 [Oryza sativa Japonica Group] g...    76   3e-12
ref|XP_003615833.1| FAR1-related protein [Medicago truncatula] g...    75   4e-12

>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
 Frame = +3

Query: 36  RKRGSIKEGCSARIVVVKRSD-LYVVTIAEEGHCHPLSTPHKRHLLRSHRNVSAAQKCLT 212
           RKR   +EGC AR+V+ +  D  Y V+   EGH H L +P KR  LRS RNV++  K + 
Sbjct: 165 RKRKLTREGCKARLVLKRTIDGKYEVSNFYEGHSHGLVSPSKRQFLRSARNVTSVHKNIL 224

Query: 213 QQLGMVNIPQCQQYNFLALQAREIENIGCTQRDLYNFERDNRNELKGQDGDMLNEYLKLE 392
                 N+   + Y  +  Q    ENIGCTQRDL N+ R+ +  +K  D DM  +  + +
Sbjct: 225 FSCNRANVGTSKSYQIMKEQVGSYENIGCTQRDLQNYSRNLKELIKDSDADMFIDNFRRK 284

Query: 393 QQ 398
           ++
Sbjct: 285 RE 286


>ref|XP_002438240.1| hypothetical protein SORBIDRAFT_10g010346 [Sorghum bicolor]
           gi|241916463|gb|EER89607.1| hypothetical protein
           SORBIDRAFT_10g010346 [Sorghum bicolor]
          Length = 261

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 47/116 (40%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = +3

Query: 33  KRKRGSIKE---GCSARIVVVKRSDL-YVVTIAEEGHCHPLSTPHKRHLLRSHRNVSAAQ 200
           KRK    KE   GC ARIVV   SD  Y +    E H H   +P K+HLLRS+R+VS   
Sbjct: 119 KRKTSKSKETRCGCQARIVVKLGSDKKYRILSFVEEHNHGFVSPDKKHLLRSNRHVSERV 178

Query: 201 KCLTQQLGMVNIPQCQQYNFLALQAREIENIGCTQRDLYNFERDNRNELKGQDGDM 368
           K         +I   Q +  L +     EN+GCT RDL N+ RD+R+++K  D +M
Sbjct: 179 KSTLFNCHKASIGMSQTFRLLHVSDGGFENVGCTLRDLKNYYRDSRSKIKDADAEM 234


>ref|XP_003581310.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 743

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   KGKLLADVDAKR-KRGSIKEGCSARIVV-VKRSDLYVVTIAEEGHCHPLSTPHKRHLLRS 176
           KG  + D   KR K  + + GC A I V +  +D Y +    E H H L +P K HL+RS
Sbjct: 82  KGNEIIDPSVKRHKNTATRCGCDAHIFVKLCVTDAYKIESWVEHHNHSLMSPDKHHLIRS 141

Query: 177 HRNVSAAQKCLTQQLGMVNIPQCQQYNFLALQAREIENIGCTQRDLYNFERDNRNELKGQ 356
           +R VS   K         +I  CQ Y  L +      N+GCT+RDL N+ RD R +++  
Sbjct: 142 NRQVSERAKNTLYTCNKASIGTCQAYRLLQVSEGGFSNVGCTKRDLQNYYRDLRYKIRNA 201

Query: 357 DGDM 368
           D  M
Sbjct: 202 DAQM 205


>ref|NP_001061399.2| Os08g0263600 [Oryza sativa Japonica Group]
           gi|255678302|dbj|BAF23313.2| Os08g0263600 [Oryza sativa
           Japonica Group]
          Length = 503

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
 Frame = +3

Query: 27  DAKRKRGSIKE---GCSARIVVVKRSD-LYVVTIAEEGHCHPLSTPHKRHLLRSHRNVSA 194
           D  +KR  +KE   GC A I V   SD  Y +    E H H L +P K HL+RS+R VS 
Sbjct: 107 DPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVSE 166

Query: 195 AQKCLTQQLGMVNIPQCQQYNFLALQAREIENIGCTQRDLYNFERDNRNELKGQDGDML- 371
             K         ++   Q Y  L +     EN+GCT+RDL N+ RD R ++K  D +ML 
Sbjct: 167 RAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMKNADAEMLE 226

Query: 372 ---NEYLKLEQQ 398
              N+Y  L ++
Sbjct: 227 NVYNDYGNLLEE 238


>ref|XP_003615833.1| FAR1-related protein [Medicago truncatula]
           gi|355517168|gb|AES98791.1| FAR1-related protein
           [Medicago truncatula]
          Length = 662

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   KGKLLADVDAKRKRGSI-KEGCSARIVVV-KRSDLYVVTIAEEGHCHPLSTPHKRHLLRS 176
           K ++L  V  K +R S+ +EGC+A  V        Y +    E H H L++P KR  LRS
Sbjct: 93  KDEVLDAVAVKSRRRSLTREGCNANAVFKWVEGGKYELARFNESHTHALASPSKRPFLRS 152

Query: 177 HRNVSAAQKCLTQQLGMVNIPQCQQYNFLALQAREIENIGCTQRDLYNFERDNRNELKGQ 356
            R V+   K L    G  NI   + ++ +  Q    EN+GCTQ+DL N++RD +  LK  
Sbjct: 153 ARKVNPMHKSLLHAYGRANIGPSKSFHLMKEQFGGYENVGCTQKDLQNYKRDLQTLLKDS 212

Query: 357 DGDMLNEYLKLEQQ 398
           D ++  +  + +Q+
Sbjct: 213 DANVFIDNFRRKQE 226


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