BLASTX nr result

ID: Panax21_contig00009449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009449
         (2528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234667.1| cryptochrome 1 [Solanum lycopersicum] gi|552...   721   0.0  
gb|AEK26572.1| cryptochrome 1.2 [Populus tremula]                     717   0.0  
gb|ABB36796.1| cryptochrome 1 [Nicotiana sylvestris]                  713   0.0  
ref|XP_002301054.1| predicted protein [Populus trichocarpa] gi|2...   712   0.0  
gb|AEK26571.1| cryptochrome 1.1 [Populus tremula]                     708   0.0  

>ref|NP_001234667.1| cryptochrome 1 [Solanum lycopersicum]
            gi|5524201|gb|AAD44161.1|AF130423_1 cryptochrome 1
            [Solanum lycopersicum]
            gi|8101442|gb|AAF72555.1|AF130424_1 cryptochrome 1
            [Solanum lycopersicum]
          Length = 679

 Score =  721 bits (1860), Expect = 0.0
 Identities = 340/396 (85%), Positives = 363/396 (91%)
 Frame = -1

Query: 1190 MSAGGCNIVWFRRDLRVEDNPXXXXXXXXXXXXXVYIWAPEEDGHYYPGRVSRWWLKXXX 1011
            MS GGC+IVWFRRDLRVEDNP             V+I+APEE+GHYYPGRVSRWWLK   
Sbjct: 1    MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFIYAPEEEGHYYPGRVSRWWLKQSL 60

Query: 1010 XXXXXXXXXLGTTLITKRSTDSVSSLLEVIKSTGATQVFFNHLYDPLSLVRDHRTKEVLT 831
                     LGT+LITKRSTDS+SSLLEV+KSTGATQ+FFNHLYDP+SLVRDHRTKE+LT
Sbjct: 61   AHLDSSLKSLGTSLITKRSTDSISSLLEVVKSTGATQLFFNHLYDPISLVRDHRTKEILT 120

Query: 830  AQGIAVRSFNADLLYEPWEVLDDVGRPFTTFTAFWNKCLSMPYDPESPLLPPKRIISGDV 651
            AQGI+VRSFNADLLYEPWEV DD GRPFTTF+AFW KCLSMPYDPE+PLLPPKRIISGD 
Sbjct: 121  AQGISVRSFNADLLYEPWEVNDDEGRPFTTFSAFWEKCLSMPYDPEAPLLPPKRIISGDA 180

Query: 650  SRCPSDTLVFEDESEKGSNALLARAWSPGWNNADKALTTFINGPLIEYSKNRRKADSATT 471
            SRCPSD LVFEDESEKGSNALLARAWSPGW+NADKALTTF+NGPL+EYS+NRRKADSATT
Sbjct: 181  SRCPSDNLVFEDESEKGSNALLARAWSPGWSNADKALTTFVNGPLLEYSQNRRKADSATT 240

Query: 470  SFLSPHLHFGEVSVRKVFHLVRLKQVLWANEGNQAGEESVNLFLKSIGLREYSRYISFNH 291
            SFLSPHLHFGEVSVRKVFH VR+KQVLWANEGN+AGEESVNLFLKSIGLREYSRY+SFNH
Sbjct: 241  SFLSPHLHFGEVSVRKVFHFVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 290  PYSHEKPLLVHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 111
            PYSHE+PLL HL++FPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301  PYSHERPLLGHLRYFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 110  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 3
            FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI
Sbjct: 361  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 396


>gb|AEK26572.1| cryptochrome 1.2 [Populus tremula]
          Length = 681

 Score =  717 bits (1852), Expect = 0.0
 Identities = 340/396 (85%), Positives = 361/396 (91%)
 Frame = -1

Query: 1190 MSAGGCNIVWFRRDLRVEDNPXXXXXXXXXXXXXVYIWAPEEDGHYYPGRVSRWWLKXXX 1011
            MS GGC+IVWFRRDLRVEDNP             V++WAPEE+GHYYPGRVSRWWLK   
Sbjct: 1    MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 1010 XXXXXXXXXLGTTLITKRSTDSVSSLLEVIKSTGATQVFFNHLYDPLSLVRDHRTKEVLT 831
                     LGT+L+TKRSTDSVS+LLEVIKSTGATQ+FFNHLYDPLSLVRDHR KEVLT
Sbjct: 61   AHLDSSLRSLGTSLVTKRSTDSVSTLLEVIKSTGATQLFFNHLYDPLSLVRDHRAKEVLT 120

Query: 830  AQGIAVRSFNADLLYEPWEVLDDVGRPFTTFTAFWNKCLSMPYDPESPLLPPKRIISGDV 651
            AQGIAVRSFNADLLYEPW+V D  GRPFTTF  FW++CLSMP+DPE+PLLPPKRIISGD 
Sbjct: 121  AQGIAVRSFNADLLYEPWDVNDAQGRPFTTFATFWDRCLSMPFDPEAPLLPPKRIISGDA 180

Query: 650  SRCPSDTLVFEDESEKGSNALLARAWSPGWNNADKALTTFINGPLIEYSKNRRKADSATT 471
            SRCPS+ LVFEDESEKGSNALLARAWSPGW+NAD+ALTTFINGPLIEYSKNRRKADSATT
Sbjct: 181  SRCPSEMLVFEDESEKGSNALLARAWSPGWSNADRALTTFINGPLIEYSKNRRKADSATT 240

Query: 470  SFLSPHLHFGEVSVRKVFHLVRLKQVLWANEGNQAGEESVNLFLKSIGLREYSRYISFNH 291
            SFLSPHLHFGEVSVRKVFHLVR+KQVLWANEGN+AGEESVNLFLKSIGLREYSRY+SFNH
Sbjct: 241  SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH 300

Query: 290  PYSHEKPLLVHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 111
            PYSHE+PLL HLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV+S
Sbjct: 301  PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVAS 360

Query: 110  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 3
            FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI
Sbjct: 361  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 396


>gb|ABB36796.1| cryptochrome 1 [Nicotiana sylvestris]
          Length = 681

 Score =  713 bits (1841), Expect = 0.0
 Identities = 335/396 (84%), Positives = 360/396 (90%)
 Frame = -1

Query: 1190 MSAGGCNIVWFRRDLRVEDNPXXXXXXXXXXXXXVYIWAPEEDGHYYPGRVSRWWLKXXX 1011
            MS  GC+IVWFRRDLRVEDNP             V+IWAPEE+GHYYPGRVSRWWLK   
Sbjct: 1    MSGSGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 1010 XXXXXXXXXLGTTLITKRSTDSVSSLLEVIKSTGATQVFFNHLYDPLSLVRDHRTKEVLT 831
                     LGT+L+TKRSTDS+SSLLE++KSTGATQ+FFNHLYDP+SLVRDHR KEVLT
Sbjct: 61   AHLDSSLKSLGTSLVTKRSTDSISSLLEIVKSTGATQLFFNHLYDPISLVRDHRAKEVLT 120

Query: 830  AQGIAVRSFNADLLYEPWEVLDDVGRPFTTFTAFWNKCLSMPYDPESPLLPPKRIISGDV 651
            AQGI+VRSFNADLLYEPWEV D+ GRPFTTF+AFW KCLSMPYDPE+PLLPPKRII GD 
Sbjct: 121  AQGISVRSFNADLLYEPWEVNDEEGRPFTTFSAFWEKCLSMPYDPEAPLLPPKRIIPGDA 180

Query: 650  SRCPSDTLVFEDESEKGSNALLARAWSPGWNNADKALTTFINGPLIEYSKNRRKADSATT 471
            SRC SD+LVFEDESEKGSNALLARAWSPGW+NADKALTTF+NGPL+EYS+NRRKADSATT
Sbjct: 181  SRCSSDSLVFEDESEKGSNALLARAWSPGWSNADKALTTFVNGPLLEYSQNRRKADSATT 240

Query: 470  SFLSPHLHFGEVSVRKVFHLVRLKQVLWANEGNQAGEESVNLFLKSIGLREYSRYISFNH 291
            SFLSPHLHFGEVSVRKVFH VR+KQVLWANEGN+AGEESVNLFLKSIGLREYSRY+SFNH
Sbjct: 241  SFLSPHLHFGEVSVRKVFHFVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 290  PYSHEKPLLVHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 111
            PYSHE+PLL HL++FPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301  PYSHERPLLGHLRYFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 110  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 3
            FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI
Sbjct: 361  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 396


>ref|XP_002301054.1| predicted protein [Populus trichocarpa] gi|222842780|gb|EEE80327.1|
            predicted protein [Populus trichocarpa]
          Length = 681

 Score =  712 bits (1839), Expect = 0.0
 Identities = 338/396 (85%), Positives = 359/396 (90%)
 Frame = -1

Query: 1190 MSAGGCNIVWFRRDLRVEDNPXXXXXXXXXXXXXVYIWAPEEDGHYYPGRVSRWWLKXXX 1011
            MS GGC+IVWFRRDLRVEDNP             V++WAPEE+GHYYPGRVSRWWLK   
Sbjct: 1    MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 1010 XXXXXXXXXLGTTLITKRSTDSVSSLLEVIKSTGATQVFFNHLYDPLSLVRDHRTKEVLT 831
                     LGT+L+TKRSTDSVS+LLEVIKSTGATQ+FFNHLYDPLSLVRDHR KEVLT
Sbjct: 61   AHLDSSLRSLGTSLVTKRSTDSVSTLLEVIKSTGATQLFFNHLYDPLSLVRDHRAKEVLT 120

Query: 830  AQGIAVRSFNADLLYEPWEVLDDVGRPFTTFTAFWNKCLSMPYDPESPLLPPKRIISGDV 651
            AQGIAVRSFNADLLYEPW+V D  GRPFTTF  FW++CLSMP+DPE+PLLPPKRIISGD 
Sbjct: 121  AQGIAVRSFNADLLYEPWDVNDAQGRPFTTFATFWDRCLSMPFDPEAPLLPPKRIISGDA 180

Query: 650  SRCPSDTLVFEDESEKGSNALLARAWSPGWNNADKALTTFINGPLIEYSKNRRKADSATT 471
            SRCPS+ LVFEDE EKGSNALLARAWSPGW+NAD+ALTTFINGPLIEYSKNRRKADSATT
Sbjct: 181  SRCPSEMLVFEDELEKGSNALLARAWSPGWSNADRALTTFINGPLIEYSKNRRKADSATT 240

Query: 470  SFLSPHLHFGEVSVRKVFHLVRLKQVLWANEGNQAGEESVNLFLKSIGLREYSRYISFNH 291
            SFLSPHLHFGEVSVRKVFHLVR+KQVLWANEGN+AGEESVNLFLKSIGLREYSRY+SFNH
Sbjct: 241  SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH 300

Query: 290  PYSHEKPLLVHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 111
            PYSHE+PLL HLKFFPWVVD GYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV+S
Sbjct: 301  PYSHERPLLGHLKFFPWVVDGGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVAS 360

Query: 110  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 3
            FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI
Sbjct: 361  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 396


>gb|AEK26571.1| cryptochrome 1.1 [Populus tremula]
          Length = 681

 Score =  708 bits (1827), Expect = 0.0
 Identities = 334/396 (84%), Positives = 357/396 (90%)
 Frame = -1

Query: 1190 MSAGGCNIVWFRRDLRVEDNPXXXXXXXXXXXXXVYIWAPEEDGHYYPGRVSRWWLKXXX 1011
            MS GGC+IVWFRRDLRVEDNP             V++WAPEE+GHYYPGRVSRWWLK   
Sbjct: 1    MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 1010 XXXXXXXXXLGTTLITKRSTDSVSSLLEVIKSTGATQVFFNHLYDPLSLVRDHRTKEVLT 831
                     LGT+L+TKRSTDSVS+LLEV+KSTGATQ+ FNHLYDPLSLVRDHR KE+LT
Sbjct: 61   AYLDSSLRSLGTSLVTKRSTDSVSTLLEVVKSTGATQLLFNHLYDPLSLVRDHRAKEILT 120

Query: 830  AQGIAVRSFNADLLYEPWEVLDDVGRPFTTFTAFWNKCLSMPYDPESPLLPPKRIISGDV 651
            AQGI VRSFNADLLYEPW+V D  GRPFTTF  FW +CLSMP+DPE+PLLPPKRIISGDV
Sbjct: 121  AQGITVRSFNADLLYEPWDVNDAQGRPFTTFDTFWERCLSMPFDPEAPLLPPKRIISGDV 180

Query: 650  SRCPSDTLVFEDESEKGSNALLARAWSPGWNNADKALTTFINGPLIEYSKNRRKADSATT 471
            SRCPS TLVFEDESEKGSNALLARAWSPGW+NAD+ALTTFINGPLIEYS NRRKADSATT
Sbjct: 181  SRCPSVTLVFEDESEKGSNALLARAWSPGWSNADRALTTFINGPLIEYSMNRRKADSATT 240

Query: 470  SFLSPHLHFGEVSVRKVFHLVRLKQVLWANEGNQAGEESVNLFLKSIGLREYSRYISFNH 291
            SFLSPHLHFGEVSVRKVFHLVR+KQVLWANEGN+AGEESVNLF+KSIGLREYSRY+SFNH
Sbjct: 241  SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFIKSIGLREYSRYLSFNH 300

Query: 290  PYSHEKPLLVHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 111
            PY+HE+PLL HLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWA GWLHDRIRVVV+S
Sbjct: 301  PYTHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWAAGWLHDRIRVVVAS 360

Query: 110  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 3
            FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI
Sbjct: 361  FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 396


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