BLASTX nr result

ID: Panax21_contig00009250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009250
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   253   1e-65
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...   239   1e-61
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...   239   1e-61
ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...   222   3e-56
ref|XP_002446663.1| hypothetical protein SORBIDRAFT_06g020040 [S...   202   3e-50

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 1116

 Score =  253 bits (646), Expect = 1e-65
 Identities = 109/175 (62%), Positives = 144/175 (82%)
 Frame = -1

Query: 526  FLGVNHHGQYILLGCGLISDEDTRTFAWLFDVWLSSMSRIAPHAIITNKNKEVLNAVETV 347
            F+GVNHHGQ +LLGC L+S+EDT+TF+WLF  WL  M   AP+AIIT++++ +  A+E V
Sbjct: 590  FVGVNHHGQSVLLGCALLSNEDTKTFSWLFKTWLECMHGRAPNAIITDQDRAMKKAIEDV 649

Query: 346  FPNARHRWCLWHIMEKVPEKLKGYGQYESIRFLLHNVVYDSSNIDEFESGWKEMIEKYDL 167
            FP ARHRWCLWH+M+KVPEKL  +  YESI+ LLH+ VYDSS+I +F   WK+MIE Y+L
Sbjct: 650  FPKARHRWCLWHLMKKVPEKLGRHSHYESIKLLLHDAVYDSSSISDFMEKWKKMIECYEL 709

Query: 166  ESNEWMEELYNERYRWVPCFLKDCFWAGMSTTQRGESMNAFFDGFVTAKTSLKEF 2
              NEW++ L++ERYRWVP +++D FWAGMSTTQR ESMN+FFDG+V++KT+LK+F
Sbjct: 710  HDNEWLKGLFDERYRWVPVYVRDTFWAGMSTTQRSESMNSFFDGYVSSKTTLKQF 764


>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 862

 Score =  239 bits (611), Expect = 1e-61
 Identities = 105/175 (60%), Positives = 138/175 (78%)
 Frame = -1

Query: 526 FLGVNHHGQYILLGCGLISDEDTRTFAWLFDVWLSSMSRIAPHAIITNKNKEVLNAVETV 347
           F+GVNHHG+ +LLGC L+S+E+T TF WLF  WLS MS  AP+AIIT++ + + NA+  V
Sbjct: 261 FVGVNHHGESVLLGCALLSNEETETFVWLFRSWLSCMSNKAPNAIITDQCRAMQNAIMEV 320

Query: 346 FPNARHRWCLWHIMEKVPEKLKGYGQYESIRFLLHNVVYDSSNIDEFESGWKEMIEKYDL 167
           FP ARHRWCLWHIM+K+PEKL GY +YE I   L NVVYDS N D+F+ GW +MI+++ L
Sbjct: 321 FPEARHRWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNRDDFDKGWMKMIDEFSL 380

Query: 166 ESNEWMEELYNERYRWVPCFLKDCFWAGMSTTQRGESMNAFFDGFVTAKTSLKEF 2
           + NEW+  LY+ R  WVP ++KD FWAGMS++QR ES+NAFFDG+V A+T+LK+F
Sbjct: 381 QDNEWLAGLYDNRELWVPAYVKDTFWAGMSSSQRSESVNAFFDGYVNARTTLKQF 435


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score =  239 bits (611), Expect = 1e-61
 Identities = 105/175 (60%), Positives = 138/175 (78%)
 Frame = -1

Query: 526 FLGVNHHGQYILLGCGLISDEDTRTFAWLFDVWLSSMSRIAPHAIITNKNKEVLNAVETV 347
           F+GVNHHG+ +LLGC L+S+E+T TF WLF  WLS MS  AP+AIIT++ + + NA+  V
Sbjct: 261 FVGVNHHGESVLLGCALLSNEETETFVWLFRSWLSCMSNKAPNAIITDQCRAMQNAIMEV 320

Query: 346 FPNARHRWCLWHIMEKVPEKLKGYGQYESIRFLLHNVVYDSSNIDEFESGWKEMIEKYDL 167
           FP ARHRWCLWHIM+K+PEKL GY +YE I   L NVVYDS N D+F+ GW +MI+++ L
Sbjct: 321 FPEARHRWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNRDDFDKGWMKMIDEFSL 380

Query: 166 ESNEWMEELYNERYRWVPCFLKDCFWAGMSTTQRGESMNAFFDGFVTAKTSLKEF 2
           + NEW+  LY+ R  WVP ++KD FWAGMS++QR ES+NAFFDG+V A+T+LK+F
Sbjct: 381 QDNEWLAGLYDNRELWVPAYVKDTFWAGMSSSQRSESVNAFFDGYVNARTTLKQF 435


>ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Glycine max]
          Length = 669

 Score =  222 bits (565), Expect = 3e-56
 Identities = 102/177 (57%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
 Frame = -1

Query: 529 LFLGVNHHGQYILLGCGLISDEDTRTFAWLFDVWLSSMSR-IAPHAIITNKNKEVLNAVE 353
           LFLGVNHHGQ +LLG  L+S+ED  TF WLF  WL+ MS   AP AIIT +++ +  A+E
Sbjct: 269 LFLGVNHHGQSVLLGIALLSNEDAETFTWLFQTWLACMSTGHAPIAIITREDRAIKTAIE 328

Query: 352 TVFPNARHRWCLWHIMEKVPEKLKGYGQYESIRFLLHNVVYDSSNIDEFESGWKEMIEKY 173
            VFP AR RWCL HIM++V EKL+GY +YESI+      VYDS + D+F   WK++I  +
Sbjct: 329 IVFPKARQRWCLSHIMKRVSEKLRGYPRYESIKTDFDGAVYDSFSKDDFNESWKKLIYSH 388

Query: 172 DLESNEWMEELYNERYRWVPCFLKDCFWAGMSTTQRGESMNAFFDGFVTAKTSLKEF 2
           +L  NEW+  LYNER+RWVP ++KD FWAGMST  R ES++AFFDG+V +KTSLK+F
Sbjct: 389 NLHDNEWLNSLYNERHRWVPVYVKDTFWAGMSTIDRNESVHAFFDGYVCSKTSLKQF 445


>ref|XP_002446663.1| hypothetical protein SORBIDRAFT_06g020040 [Sorghum bicolor]
           gi|241937846|gb|EES10991.1| hypothetical protein
           SORBIDRAFT_06g020040 [Sorghum bicolor]
          Length = 798

 Score =  202 bits (513), Expect = 3e-50
 Identities = 87/175 (49%), Positives = 121/175 (69%)
 Frame = -1

Query: 526 FLGVNHHGQYILLGCGLISDEDTRTFAWLFDVWLSSMSRIAPHAIITNKNKEVLNAVETV 347
           FLG+NHHGQ++LLGCGL+ DE   TFAWLF  WL  M+  AP AI+T  ++ V+ AV  V
Sbjct: 282 FLGINHHGQFVLLGCGLLGDESPETFAWLFKKWLKCMNDKAPEAIVTTHSRPVVKAVSEV 341

Query: 346 FPNARHRWCLWHIMEKVPEKLKGYGQYESIRFLLHNVVYDSSNIDEFESGWKEMIEKYDL 167
           FPN RHR+ LWHIM+++PE        E++   +  VVYD+    +FE  W EMI +Y+L
Sbjct: 342 FPNTRHRYNLWHIMKELPEMSGRVEDKEAVSLRMKKVVYDTITSADFEREWVEMINQYNL 401

Query: 166 ESNEWMEELYNERYRWVPCFLKDCFWAGMSTTQRGESMNAFFDGFVTAKTSLKEF 2
             N+W+  L+ ER +WVP ++KD FWAG+ST +R E + AFFDG++T +T++K F
Sbjct: 402 HDNQWLTTLFEERAKWVPAYVKDTFWAGISTVRRSERLEAFFDGYITPETTIKTF 456


Top