BLASTX nr result
ID: Panax21_contig00008490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008490
(947 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containi... 291 2e-95
emb|CAN75138.1| hypothetical protein VITISV_040755 [Vitis vinifera] 292 5e-95
ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containi... 290 1e-91
ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containi... 281 2e-90
gb|ADN33740.1| pentatricopeptide repeat-containing protein [Cucu... 288 3e-90
>ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Vitis vinifera]
Length = 672
Score = 291 bits (746), Expect(2) = 2e-95
Identities = 150/200 (75%), Positives = 165/200 (82%), Gaps = 3/200 (1%)
Frame = -2
Query: 748 KLPKHASVLTGNRLNLHNRILKLI*ENDLEKAALLTHHSIYSNCKPTIFTCNVVMAAQLH 569
KLP+ S L+GNRLNLHNRIL LI NDL++AALLT HSIYSNC+PTIFT N V+AA L
Sbjct: 83 KLPEPVSALSGNRLNLHNRILGLIRVNDLDEAALLTRHSIYSNCRPTIFTVNSVLAALLR 142
Query: 568 QSRYGDHLQLHRFITQANVAANVITHNLVINAYLDCRKLDTALEHYKLL---APFNPSPT 398
QSRY D L LHRFITQA VAANV+THNL+INAYLDCRK DTALEHYK L APFNPSPT
Sbjct: 143 QSRYSDLLSLHRFITQAGVAANVVTHNLLINAYLDCRKTDTALEHYKQLINDAPFNPSPT 202
Query: 397 TYRILIKGLIDNDKLERAMEIKNEMLSKSFTPDPVVYSYLMSGQAKKLNADGVFELYEEL 218
TYRILIKG++DN K+ERA+E+K EML K F DPVVYSYLM G + LNADGVFELYEEL
Sbjct: 203 TYRILIKGIVDNGKVERALELKEEMLGKGFAADPVVYSYLMLGHVRNLNADGVFELYEEL 262
Query: 217 KEKQGGLVSDGVVYGSLVKG 158
KEK G V DGVV GSL+KG
Sbjct: 263 KEKLGD-VDDGVVVGSLMKG 281
Score = 85.1 bits (209), Expect(2) = 2e-95
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = -1
Query: 179 VWKLGKGYFLRGMENEAMECYKDAVGESENSKIKMSAVAYNNILDALSKNGKFDEALRL 3
V L KGYFLRGME EAM+CY +AVGE SKI+MSAVA+N++LDALSKNGKFDEA+ L
Sbjct: 275 VGSLMKGYFLRGMEKEAMQCYAEAVGEG--SKIRMSAVAFNSVLDALSKNGKFDEAMLL 331
>emb|CAN75138.1| hypothetical protein VITISV_040755 [Vitis vinifera]
Length = 637
Score = 292 bits (747), Expect(2) = 5e-95
Identities = 150/200 (75%), Positives = 165/200 (82%), Gaps = 3/200 (1%)
Frame = -2
Query: 748 KLPKHASVLTGNRLNLHNRILKLI*ENDLEKAALLTHHSIYSNCKPTIFTCNVVMAAQLH 569
KLP+ S L+GNRLNLHNRIL LI NDL++AALLT HSIYSNC+PTIFT N V+AA L
Sbjct: 83 KLPEPVSALSGNRLNLHNRILGLIRVNDLDEAALLTRHSIYSNCRPTIFTVNSVLAALLR 142
Query: 568 QSRYGDHLQLHRFITQANVAANVITHNLVINAYLDCRKLDTALEHYKLL---APFNPSPT 398
QSRY D L LHRFITQA VAANV+THNL+INAYLDCRK DTALEHYK L APFNPSPT
Sbjct: 143 QSRYSDLLSLHRFITQAGVAANVVTHNLLINAYLDCRKTDTALEHYKQLINDAPFNPSPT 202
Query: 397 TYRILIKGLIDNDKLERAMEIKNEMLSKSFTPDPVVYSYLMSGQAKKLNADGVFELYEEL 218
TYRILIKG++DN K+ERA+E+K EML K F DPVVYSYLM G + LNADGVFELYEEL
Sbjct: 203 TYRILIKGJVDNGKVERALELKEEMLGKGFAADPVVYSYLMLGHVRNLNADGVFELYEEL 262
Query: 217 KEKQGGLVSDGVVYGSLVKG 158
KEK G V DGVV GSL+KG
Sbjct: 263 KEKLGD-VDDGVVVGSLMKG 281
Score = 83.2 bits (204), Expect(2) = 5e-95
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = -1
Query: 179 VWKLGKGYFLRGMENEAMECYKDAVGESENSKIKMSAVAYNNILDALSKNGKFDEALRL 3
V L KGYFLRGME EAM+CY +AVGE SKI+MSAVA+N++LD LSKNGKFDEA+ L
Sbjct: 275 VGSLMKGYFLRGMEKEAMQCYAEAVGEG--SKIRMSAVAFNSVLDXLSKNGKFDEAMLL 331
>ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Cucumis sativus]
gi|449511036|ref|XP_004163845.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g49240-like [Cucumis sativus]
Length = 624
Score = 290 bits (741), Expect(2) = 1e-91
Identities = 140/200 (70%), Positives = 163/200 (81%), Gaps = 3/200 (1%)
Frame = -2
Query: 748 KLPKHASVLTGNRLNLHNRILKLI*ENDLEKAALLTHHSIYSNCKPTIFTCNVVMAAQLH 569
K+P+H S L+GNRLNLHNRIL LI ENDLE+AAL T HSIYSNC+PTIFT N V+ AQL
Sbjct: 88 KIPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLR 147
Query: 568 QSRYGDHLQLHRFITQANVAANVITHNLVINAYLDCRKLDTALEHYKLL---APFNPSPT 398
QS+Y D L LHRFITQA V N+ITHNL+ YLDCRK DTA+EHYK L APFNPSPT
Sbjct: 148 QSKYADLLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPT 207
Query: 397 TYRILIKGLIDNDKLERAMEIKNEMLSKSFTPDPVVYSYLMSGQAKKLNADGVFELYEEL 218
TYRILIKGL+DN+KLERAME+K+EM+ K F PDP++Y YLM G + L+ DGVF+L+EEL
Sbjct: 208 TYRILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEEL 267
Query: 217 KEKQGGLVSDGVVYGSLVKG 158
KEK G V DGVVYG+L+KG
Sbjct: 268 KEKLGATVEDGVVYGNLMKG 287
Score = 73.9 bits (180), Expect(2) = 1e-91
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = -1
Query: 170 LGKGYFLRGMENEAMECYKDAVGESENSKIKMSAVAYNNILDALSKNGKFDEALRL 3
L KGYF++ ME EAM+CY++ VG+ NS +KMSA+AYN++LDAL +NGKF EAL L
Sbjct: 284 LMKGYFMKEMEEEAMKCYEETVGD--NSVVKMSAIAYNSVLDALCRNGKFGEALTL 337
>ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Glycine max]
Length = 631
Score = 281 bits (718), Expect(2) = 2e-90
Identities = 139/200 (69%), Positives = 157/200 (78%), Gaps = 3/200 (1%)
Frame = -2
Query: 748 KLPKHASVLTGNRLNLHNRILKLI*ENDLEKAALLTHHSIYSNCKPTIFTCNVVMAAQLH 569
KLP+H S LTGNRLNLHNRIL LI ENDL++AAL T HSIYSNC+PTIFT N V+AA L
Sbjct: 81 KLPEHVSALTGNRLNLHNRILTLIRENDLDEAALYTRHSIYSNCRPTIFTINAVLAALLR 140
Query: 568 QSRYGDHLQLHRFITQANVAANVITHNLVINAYLDCRKLDTALEHYKLL---APFNPSPT 398
QSRY D L LHRFITQA V N+ITHNLV YLDCRK DTALEHYK AP NPSPT
Sbjct: 141 QSRYSDLLSLHRFITQAGVVPNIITHNLVFQTYLDCRKPDTALEHYKQFLNDAPMNPSPT 200
Query: 397 TYRILIKGLIDNDKLERAMEIKNEMLSKSFTPDPVVYSYLMSGQAKKLNADGVFELYEEL 218
TYR+LIKGLIDN KLERAM+IK EM SK F PDP+VY YLM G A+ + D + LYEEL
Sbjct: 201 TYRVLIKGLIDNSKLERAMDIKTEMDSKGFAPDPLVYHYLMLGHARVSDGDAILRLYEEL 260
Query: 217 KEKQGGLVSDGVVYGSLVKG 158
+E+ GG+V DG+V+G L+KG
Sbjct: 261 RERLGGVVQDGIVFGCLMKG 280
Score = 79.0 bits (193), Expect(2) = 2e-90
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -1
Query: 170 LGKGYFLRGMENEAMECYKDAVGESENSKIKMSAVAYNNILDALSKNGKFDEALRL 3
L KGYF++GME EAMECY++A+G K KMSAV YN++LDALSKNG+FDEALRL
Sbjct: 277 LMKGYFVKGMEKEAMECYEEALG-----KKKMSAVGYNSVLDALSKNGRFDEALRL 327
>gb|ADN33740.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 624
Score = 288 bits (736), Expect(2) = 3e-90
Identities = 140/200 (70%), Positives = 162/200 (81%), Gaps = 3/200 (1%)
Frame = -2
Query: 748 KLPKHASVLTGNRLNLHNRILKLI*ENDLEKAALLTHHSIYSNCKPTIFTCNVVMAAQLH 569
K+P+H S L+GNRLNLHNRIL LI ENDLE+AAL T HSIYSNC+PTIFT N V+ AQL
Sbjct: 88 KVPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLR 147
Query: 568 QSRYGDHLQLHRFITQANVAANVITHNLVINAYLDCRKLDTALEHYKLL---APFNPSPT 398
QS+Y D L LHRFITQA V N+ITHNL+ YLDCRK DTA+EHYK L APFNPSPT
Sbjct: 148 QSKYADLLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPT 207
Query: 397 TYRILIKGLIDNDKLERAMEIKNEMLSKSFTPDPVVYSYLMSGQAKKLNADGVFELYEEL 218
TYRILIKGL+DN KLERAME+K EM+ K F PDP++Y YLM+G + + DGVF+L+EEL
Sbjct: 208 TYRILIKGLVDNKKLERAMELKEEMIVKGFAPDPLIYHYLMAGCVRSSDPDGVFKLFEEL 267
Query: 217 KEKQGGLVSDGVVYGSLVKG 158
KEK GG V DGVVYG+L+KG
Sbjct: 268 KEKLGGTVEDGVVYGNLMKG 287
Score = 71.6 bits (174), Expect(2) = 3e-90
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = -1
Query: 170 LGKGYFLRGMENEAMECYKDAVGESENSKIKMSAVAYNNILDALSKNGKFDEALRL 3
L KGYF++ ME EAM+CY++ VG+ N +KMSA+AYN++LDAL K+GKF EAL L
Sbjct: 284 LMKGYFMKEMEEEAMKCYEETVGD--NPVVKMSAIAYNSVLDALCKHGKFSEALTL 337