BLASTX nr result

ID: Panax21_contig00008489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008489
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-70
emb|CAN75138.1| hypothetical protein VITISV_040755 [Vitis vinifera]   176   1e-70
ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containi...   179   4e-70
ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containi...   182   8e-70
ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containi...   180   6e-69

>ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Vitis vinifera]
          Length = 672

 Score =  176 bits (445), Expect(2) = 1e-70
 Identities = 86/106 (81%), Positives = 93/106 (87%)
 Frame = +3

Query: 156 KLPEHASVLTANRLNLHNRILKLIRENDLEEAALLTRHSIYSNCKPTIFTCNAVMAAQLR 335
           KLPE  S L+ NRLNLHNRIL LIR NDL+EAALLTRHSIYSNC+PTIFT N+V+AA LR
Sbjct: 83  KLPEPVSALSGNRLNLHNRILGLIRVNDLDEAALLTRHSIYSNCRPTIFTVNSVLAALLR 142

Query: 336 QSRYGDLLQLHRFITQANVAANVITHNLVINTYLDCRKPDTALEHY 473
           QSRY DLL LHRFITQA VAANV+THNL+IN YLDCRK DTALEHY
Sbjct: 143 QSRYSDLLSLHRFITQAGVAANVVTHNLLINAYLDCRKTDTALEHY 188



 Score =  117 bits (294), Expect(2) = 1e-70
 Identities = 59/89 (66%), Positives = 67/89 (75%)
 Frame = +1

Query: 568 NDKLERAMEIKNEMLSKGFAPDPVVYSYLMSGQAKKLNADGVFDLYXXXXXXXXXXVSDG 747
           N K+ERA+E+K EML KGFA DPVVYSYLM G  + LNADGVF+LY          V DG
Sbjct: 214 NGKVERALELKEEMLGKGFAADPVVYSYLMLGHVRNLNADGVFELY-EELKEKLGDVDDG 272

Query: 748 VVYGSLVKGYFLRGMENEAMECYKDAVGE 834
           VV GSL+KGYFLRGME EAM+CY +AVGE
Sbjct: 273 VVVGSLMKGYFLRGMEKEAMQCYAEAVGE 301


>emb|CAN75138.1| hypothetical protein VITISV_040755 [Vitis vinifera]
          Length = 637

 Score =  176 bits (445), Expect(2) = 1e-70
 Identities = 86/106 (81%), Positives = 93/106 (87%)
 Frame = +3

Query: 156 KLPEHASVLTANRLNLHNRILKLIRENDLEEAALLTRHSIYSNCKPTIFTCNAVMAAQLR 335
           KLPE  S L+ NRLNLHNRIL LIR NDL+EAALLTRHSIYSNC+PTIFT N+V+AA LR
Sbjct: 83  KLPEPVSALSGNRLNLHNRILGLIRVNDLDEAALLTRHSIYSNCRPTIFTVNSVLAALLR 142

Query: 336 QSRYGDLLQLHRFITQANVAANVITHNLVINTYLDCRKPDTALEHY 473
           QSRY DLL LHRFITQA VAANV+THNL+IN YLDCRK DTALEHY
Sbjct: 143 QSRYSDLLSLHRFITQAGVAANVVTHNLLINAYLDCRKTDTALEHY 188



 Score =  117 bits (294), Expect(2) = 1e-70
 Identities = 59/89 (66%), Positives = 67/89 (75%)
 Frame = +1

Query: 568 NDKLERAMEIKNEMLSKGFAPDPVVYSYLMSGQAKKLNADGVFDLYXXXXXXXXXXVSDG 747
           N K+ERA+E+K EML KGFA DPVVYSYLM G  + LNADGVF+LY          V DG
Sbjct: 214 NGKVERALELKEEMLGKGFAADPVVYSYLMLGHVRNLNADGVFELY-EELKEKLGDVDDG 272

Query: 748 VVYGSLVKGYFLRGMENEAMECYKDAVGE 834
           VV GSL+KGYFLRGME EAM+CY +AVGE
Sbjct: 273 VVVGSLMKGYFLRGMEKEAMQCYAEAVGE 301


>ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Cucumis sativus]
           gi|449511036|ref|XP_004163845.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g49240-like [Cucumis sativus]
          Length = 624

 Score =  179 bits (454), Expect(2) = 4e-70
 Identities = 84/106 (79%), Positives = 92/106 (86%)
 Frame = +3

Query: 156 KLPEHASVLTANRLNLHNRILKLIRENDLEEAALLTRHSIYSNCKPTIFTCNAVMAAQLR 335
           K+PEH S L+ NRLNLHNRIL LIRENDLEEAAL TRHSIYSNC+PTIFT NAV+ AQLR
Sbjct: 88  KIPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLR 147

Query: 336 QSRYGDLLQLHRFITQANVAANVITHNLVINTYLDCRKPDTALEHY 473
           QS+Y DLL LHRFITQA V  N+ITHNL+  TYLDCRKPDTA+EHY
Sbjct: 148 QSKYADLLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHY 193



 Score =  112 bits (280), Expect(2) = 4e-70
 Identities = 50/90 (55%), Positives = 68/90 (75%)
 Frame = +1

Query: 568 NDKLERAMEIKNEMLSKGFAPDPVVYSYLMSGQAKKLNADGVFDLYXXXXXXXXXXVSDG 747
           N+KLERAME+K+EM+ KGFAPDP++Y YLM G  + L+ DGVF L+          V DG
Sbjct: 219 NNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDG 278

Query: 748 VVYGSLVKGYFLRGMENEAMECYKDAVGES 837
           VVYG+L+KGYF++ ME EAM+CY++ VG++
Sbjct: 279 VVYGNLMKGYFMKEMEEEAMKCYEETVGDN 308


>ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Glycine max]
          Length = 631

 Score =  182 bits (462), Expect(2) = 8e-70
 Identities = 88/106 (83%), Positives = 92/106 (86%)
 Frame = +3

Query: 156 KLPEHASVLTANRLNLHNRILKLIRENDLEEAALLTRHSIYSNCKPTIFTCNAVMAAQLR 335
           KLPEH S LT NRLNLHNRIL LIRENDL+EAAL TRHSIYSNC+PTIFT NAV+AA LR
Sbjct: 81  KLPEHVSALTGNRLNLHNRILTLIRENDLDEAALYTRHSIYSNCRPTIFTINAVLAALLR 140

Query: 336 QSRYGDLLQLHRFITQANVAANVITHNLVINTYLDCRKPDTALEHY 473
           QSRY DLL LHRFITQA V  N+ITHNLV  TYLDCRKPDTALEHY
Sbjct: 141 QSRYSDLLSLHRFITQAGVVPNIITHNLVFQTYLDCRKPDTALEHY 186



 Score =  108 bits (270), Expect(2) = 8e-70
 Identities = 51/93 (54%), Positives = 66/93 (70%)
 Frame = +1

Query: 568 NDKLERAMEIKNEMLSKGFAPDPVVYSYLMSGQAKKLNADGVFDLYXXXXXXXXXXVSDG 747
           N KLERAM+IK EM SKGFAPDP+VY YLM G A+  + D +  LY          V DG
Sbjct: 212 NSKLERAMDIKTEMDSKGFAPDPLVYHYLMLGHARVSDGDAILRLYEELRERLGGVVQDG 271

Query: 748 VVYGSLVKGYFLRGMENEAMECYKDAVGESENS 846
           +V+G L+KGYF++GME EAMECY++A+G+ + S
Sbjct: 272 IVFGCLMKGYFVKGMEKEAMECYEEALGKKKMS 304


>ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Glycine max]
          Length = 632

 Score =  180 bits (456), Expect(2) = 6e-69
 Identities = 87/106 (82%), Positives = 91/106 (85%)
 Frame = +3

Query: 156 KLPEHASVLTANRLNLHNRILKLIRENDLEEAALLTRHSIYSNCKPTIFTCNAVMAAQLR 335
           KLPEH S LT NRLNLHNRIL LIRENDL+EAAL TRHSIYSNC+PTIFT NAV+AA LR
Sbjct: 81  KLPEHVSSLTGNRLNLHNRILTLIRENDLDEAALYTRHSIYSNCRPTIFTINAVLAALLR 140

Query: 336 QSRYGDLLQLHRFITQANVAANVITHNLVINTYLDCRKPDTALEHY 473
           QSRY D L LHRFITQA V  N+ITHNLV  TYLDCRKPDTALEHY
Sbjct: 141 QSRYSDFLSLHRFITQAGVVPNIITHNLVFQTYLDCRKPDTALEHY 186



 Score =  107 bits (268), Expect(2) = 6e-69
 Identities = 51/93 (54%), Positives = 66/93 (70%)
 Frame = +1

Query: 568 NDKLERAMEIKNEMLSKGFAPDPVVYSYLMSGQAKKLNADGVFDLYXXXXXXXXXXVSDG 747
           N+KLERA+EIK EM S+GF+PDP+VY YLM G  +  + DGV  LY          V DG
Sbjct: 212 NNKLERALEIKTEMDSRGFSPDPLVYHYLMLGHTRVSDGDGVLRLYEELRERLGGVVEDG 271

Query: 748 VVYGSLVKGYFLRGMENEAMECYKDAVGESENS 846
           VV+G L+KGYFL+GME EAMECY++ +G+ + S
Sbjct: 272 VVFGCLMKGYFLKGMEKEAMECYEEVLGKKKMS 304


Top