BLASTX nr result

ID: Panax21_contig00008484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008484
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278056.1| PREDICTED: signal recognition particle recep...   260   2e-67
ref|XP_004144723.1| PREDICTED: signal recognition particle recep...   242   9e-62
ref|XP_002529394.1| signal recognition particle receptor alpha s...   230   3e-58
ref|XP_002309350.1| predicted protein [Populus trichocarpa] gi|2...   215   9e-54
ref|XP_003527179.1| PREDICTED: signal recognition particle recep...   211   2e-52

>ref|XP_002278056.1| PREDICTED: signal recognition particle receptor subunit alpha
           [Vitis vinifera]
          Length = 616

 Score =  260 bits (665), Expect = 2e-67
 Identities = 155/282 (54%), Positives = 172/282 (60%)
 Frame = -3

Query: 846 KWIFHNELGLVFVAVYQRILHLLYVDDLLAMVKKEFSEIYDPKRTVYNDFDDKFRQLXXX 667
           KW FHNELGLVFVAVYQRILHLLYVDDLLAM+K+EFS IYDPKRT Y+DFD+ FRQL   
Sbjct: 60  KWTFHNELGLVFVAVYQRILHLLYVDDLLAMLKREFSVIYDPKRTAYDDFDETFRQLRME 119

Query: 666 XXXXXXXXXKSNQVGKLVSNNNLGKKQGKVQKTGAEGGDKKMXXXXXXXXXXXXXXXXGR 487
                    KS  V K V+N+   KKQG+VQK G EGG+KK                  +
Sbjct: 120 AEARAEELKKSKPVAKPVNNS---KKQGQVQKVGFEGGNKK--KGGSGPGSDGGDGNGRK 174

Query: 486 MSEXXXXXXXXXXXGEVTARGNINGKENESSNTGAFDVNKLQKLRAKGAKKTDTXXXXXX 307
           M               + A    NGKEN SSN GAFDVNKLQKLRAKG KKTDT      
Sbjct: 175 MENGHANGNTDETKVALVA----NGKENASSNIGAFDVNKLQKLRAKGGKKTDTVVNKGS 230

Query: 306 XXXXXXXXXXKNRVWDEAPPESKLDFTDPMTQNGDENIVVVAANEGESMMXXXXXXXXXX 127
                     KNRVWD +P ESKLDFTDP  QNGDEN V+VAA+EGESMM          
Sbjct: 231 KVDPNKKITKKNRVWDVSPTESKLDFTDPADQNGDENAVIVAADEGESMMDKEEIVSSES 290

Query: 126 XXXXXXXXXXDMKVDSKKKKGWFSSMLQSIAGKANLEKADLE 1
                     D K+++ KKKGWFS+M QSIAGKANLEKADLE
Sbjct: 291 ETEEDEEMEKDSKMET-KKKGWFSAMFQSIAGKANLEKADLE 331


>ref|XP_004144723.1| PREDICTED: signal recognition particle receptor subunit alpha
           homolog [Cucumis sativus]
          Length = 617

 Score =  242 bits (617), Expect = 9e-62
 Identities = 145/282 (51%), Positives = 171/282 (60%)
 Frame = -3

Query: 846 KWIFHNELGLVFVAVYQRILHLLYVDDLLAMVKKEFSEIYDPKRTVYNDFDDKFRQLXXX 667
           KW FHNELGLVFVAVYQRILHLLYVDDLLAMVK+ FSEIYDPKR VY+DFD+ FRQL   
Sbjct: 60  KWTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRME 119

Query: 666 XXXXXXXXXKSNQVGKLVSNNNLGKKQGKVQKTGAEGGDKKMXXXXXXXXXXXXXXXXGR 487
                    K+ QVGK ++N    +KQG+ QKTG   G+ K                  +
Sbjct: 120 AEARTNELKKTKQVGKPLNN---ARKQGQDQKTGF--GENKKSNSGLADDGDAERTKGHK 174

Query: 486 MSEXXXXXXXXXXXGEVTARGNINGKENESSNTGAFDVNKLQKLRAKGAKKTDTXXXXXX 307
           + E            ++TA   +NGKEN SSN GAFDVNKLQKLR+KG KKTD       
Sbjct: 175 L-ENGYSNGNHVIESKLTA--VVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDPVANKGS 231

Query: 306 XXXXXXXXXXKNRVWDEAPPESKLDFTDPMTQNGDENIVVVAANEGESMMXXXXXXXXXX 127
                     KNRVWDE P E+KLDFTDP+ +NGD NI V+AA++G+SMM          
Sbjct: 232 KEEPKKKVTKKNRVWDEKPTEAKLDFTDPVGENGDNNIDVLAADQGQSMMDKEEVFSSDS 291

Query: 126 XXXXXXXXXXDMKVDSKKKKGWFSSMLQSIAGKANLEKADLE 1
                       K D+ KKKGWFSSM QSI+GKA+L+KADLE
Sbjct: 292 EDEEDEEGDKGSKPDA-KKKGWFSSMFQSISGKASLDKADLE 332


>ref|XP_002529394.1| signal recognition particle receptor alpha subunit, putative
           [Ricinus communis] gi|223531142|gb|EEF32990.1| signal
           recognition particle receptor alpha subunit, putative
           [Ricinus communis]
          Length = 618

 Score =  230 bits (587), Expect = 3e-58
 Identities = 147/283 (51%), Positives = 163/283 (57%), Gaps = 1/283 (0%)
 Frame = -3

Query: 846 KWIFHNELGLVFVAVYQRILHLLYVDDLLAMVKKEFSEIYDPKRTVYNDFDDKFRQLXXX 667
           KW FHNELGLVFVAVYQRILHLLYVD+LLAMVK+EFSEIYD KR  YNDFD+ FRQL   
Sbjct: 60  KWTFHNELGLVFVAVYQRILHLLYVDELLAMVKREFSEIYDHKRLEYNDFDETFRQLRKE 119

Query: 666 XXXXXXXXXKSNQVGKLVSNNNLGKKQGKVQKTGAEGGDKKMXXXXXXXXXXXXXXXXGR 487
                    KS QVGK V   N GKKQG V+K G +GG+KK                  +
Sbjct: 120 AEARAEELKKSKQVGKPV---NDGKKQGLVRKGGFQGGNKK--KIDGNDGGDDDNGKGYK 174

Query: 486 MSEXXXXXXXXXXXGEVTARGNINGKENESSNTGAFDVNKLQKLRAKGAKKTDT-XXXXX 310
           +             G  +   N NGKEN SSN  AFDV KLQK R KGAKK DT      
Sbjct: 175 LENGHSNGNLVDIEGSRSGVANANGKENASSNIAAFDVTKLQK-RGKGAKKIDTVVVSKG 233

Query: 309 XXXXXXXXXXXKNRVWDEAPPESKLDFTDPMTQNGDENIVVVAANEGESMMXXXXXXXXX 130
                      KNRVWD++P ESKLDFTDP+ +NG+ENI VVA + GESMM         
Sbjct: 234 PNVDPKKKITKKNRVWDDSPSESKLDFTDPV-ENGNENIEVVATDHGESMMDKEDIISSD 292

Query: 129 XXXXXXXXXXXDMKVDSKKKKGWFSSMLQSIAGKANLEKADLE 1
                             KKKGWFSSM QSIAGKANLEK+DLE
Sbjct: 293 SESEDEEVGKE--SKPGAKKKGWFSSMFQSIAGKANLEKSDLE 333


>ref|XP_002309350.1| predicted protein [Populus trichocarpa] gi|222855326|gb|EEE92873.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  215 bits (548), Expect = 9e-54
 Identities = 136/284 (47%), Positives = 159/284 (55%), Gaps = 2/284 (0%)
 Frame = -3

Query: 846 KWIFHNELGLVFVAVYQRILHLLYVDDLLAMVKKEFSEIYDPKRTVYNDFDDKFRQLXXX 667
           KW FHN+LGLVFVAVYQRILHLLYVD+LLAMVK EFS+IYDPKR  Y DFD+ FRQL   
Sbjct: 60  KWTFHNDLGLVFVAVYQRILHLLYVDELLAMVKHEFSQIYDPKRVEYFDFDETFRQLRKE 119

Query: 666 XXXXXXXXXKSNQVGKLVSNNNLGKKQGKVQKTGAEGGDKKMXXXXXXXXXXXXXXXXGR 487
                    K   VGK V++   G+K    + +G  GG+KK                   
Sbjct: 120 AEARAEELRKVKPVGKGVND---GRKLVMKKGSGFGGGNKKNKSEANEGGNGDDGKGRKL 176

Query: 486 MSEXXXXXXXXXXXGEVTARGNINGKENESSNTGAFDVNKLQKLRAKGAKKTD--TXXXX 313
            +                  G  NGKEN SSN  AFDV KLQKL++KG KKT   +    
Sbjct: 177 ENGHSNGNHNAVVVEGNRGMGLANGKENASSNNEAFDVTKLQKLKSKGGKKTSDTSVVSK 236

Query: 312 XXXXXXXXXXXXKNRVWDEAPPESKLDFTDPMTQNGDENIVVVAANEGESMMXXXXXXXX 133
                       KNRVWD++P ++KLDFTD +  NG+ENI VVAA++GESMM        
Sbjct: 237 GSNVDPKKKVTKKNRVWDDSPKDAKLDFTDHVEGNGNENIEVVAADQGESMMDKEEIVSS 296

Query: 132 XXXXXXXXXXXXDMKVDSKKKKGWFSSMLQSIAGKANLEKADLE 1
                       D K D+ KKKGWFSSM QSIAGKANLEKADLE
Sbjct: 297 DSEDEEDEEVSKDSKPDA-KKKGWFSSMFQSIAGKANLEKADLE 339


>ref|XP_003527179.1| PREDICTED: signal recognition particle receptor subunit alpha-like
           [Glycine max]
          Length = 623

 Score =  211 bits (537), Expect = 2e-52
 Identities = 135/287 (47%), Positives = 159/287 (55%), Gaps = 5/287 (1%)
 Frame = -3

Query: 846 KWIFHNELGLVFVAVYQRILHLLYVDDLLAMVKKEFSEIYDPKRTVYNDFDDKFRQLXXX 667
           KW FHN+LGLVFVAVYQRILHLLYV+DLLAMVK+EFS++YDPK T Y DFD+ FRQL   
Sbjct: 60  KWTFHNDLGLVFVAVYQRILHLLYVEDLLAMVKREFSQVYDPKTTAYPDFDETFRQLKME 119

Query: 666 XXXXXXXXXKSNQVGKLVSNNNLGKKQGKVQKTGAEGGDKKMXXXXXXXXXXXXXXXXGR 487
                    +SN     V+ N   + QG   K+G EGG+KK                  R
Sbjct: 120 ALARTEDLKRSN--SNPVAGNAKKQVQGN-DKSGFEGGNKK-----KKSGGGADGDDGKR 171

Query: 486 MSEXXXXXXXXXXXGEVTARGNINGKENESSNTGAFDVNKLQKLRAKGAKKTDTXXXXXX 307
             E            +     ++NG+ N S N GAFDV+KLQKLR KG KKTDT      
Sbjct: 172 KLENGHSNGNFLVAKDTNLSRDVNGRHNGSPNVGAFDVHKLQKLRTKGGKKTDTVVAKAS 231

Query: 306 XXXXXXXXXXKNRVWDE-APPESKLDFTDPMTQNGDENI-VVVAANEGESMMXXXXXXXX 133
                     KNRVWDE A  E+KLDFTD   ++G+ NI  VVAA++GESMM        
Sbjct: 232 KAEPNKKVTKKNRVWDEAATTETKLDFTDHSGEDGERNIDFVVAADQGESMMDKEEIVSS 291

Query: 132 XXXXXXXXXXXXDMKVDSK---KKKGWFSSMLQSIAGKANLEKADLE 1
                       D   + K   K KGWFSSM QSIAGKANLEK+DLE
Sbjct: 292 ESEQEEEDEDEEDAGKNRKPDAKSKGWFSSMFQSIAGKANLEKSDLE 338


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