BLASTX nr result

ID: Panax21_contig00008481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008481
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32233.3| unnamed protein product [Vitis vinifera]               71   3e-10
emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]    71   3e-10
emb|CAN77802.1| hypothetical protein VITISV_004741 [Vitis vinifera]    70   6e-10
ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...    69   2e-09
ref|XP_003628341.1| PIF-like protein [Medicago truncatula] gi|35...    67   4e-09

>emb|CBI32233.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 10/147 (6%)
 Frame = -2

Query: 824 RLGGSLKPYSWSTVGEILKNTHNFIVDHKQMKNRYDYIKGKYTAWCQLKRKTGNHYDPTT 645
           R GG LK  +W  + E L+         KQ+KN +DY+K +Y  W ++   TG+ Y+  T
Sbjct: 34  RSGGGLKFSAWPRIAEKLEKLLRKRYTSKQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVT 93

Query: 644 NTFNFTDEEWELESKANKHVDSLRTSPLSFPELCTQLYDGAAATGIDGWG---------- 495
            TF++  E+WE   +        R  PL+  E    L++G  ATG   W           
Sbjct: 94  KTFDWPAEKWEEYLQKYPETKQFRFKPLANVEELEALFEGVLATGSKNWSSGGVIASGAE 153

Query: 494 PTSKRDRTVEPNKDLEIVSIEDIPFST 414
            +S    ++     + +   ED+P +T
Sbjct: 154 ESSTHSTSMPSETSISLEEDEDLPRNT 180


>emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]
          Length = 596

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
 Frame = -2

Query: 824 RLGGSLKPYSWSTVGEILKNTHNFIVDHKQMKNRYDYIKGKYTAWCQLKRKTGNHYDPTT 645
           R GG LK  +W  + E L+         KQ+KN +DY+K +Y  W ++   TG+ Y+  T
Sbjct: 34  RSGGGLKSSAWPRIAEELEKLLGKRYTSKQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVT 93

Query: 644 NTFNFTDEEWELESKANKHVDSLRTSPLSFPELCTQLYDGAAATGIDGWG---------- 495
            TF++  E+WE   +        R  PL+  E    L+ G  ATG   W           
Sbjct: 94  KTFDWPAEKWEEYLQKYPEAKQFRFKPLANVEELEALFGGVLATGSKNWSSGGVIASGAE 153

Query: 494 PTSKRDRTVEPNKDLEIVSIEDIPFST 414
            +S    ++     + +   ED+P +T
Sbjct: 154 ESSTHSTSMPSETSISLEEDEDLPRNT 180


>emb|CAN77802.1| hypothetical protein VITISV_004741 [Vitis vinifera]
          Length = 473

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
 Frame = -2

Query: 824 RLGGSLKPYSWSTVGEILKNTHNFIVDHKQMKNRYDYIKGKYTAWCQLKRKTGNHYDPTT 645
           R GG LK  +W  + E L+         KQ+KN +DY+K +Y  W ++    G+ Y+  T
Sbjct: 70  RSGGGLKXSAWPRIAEXLEKLLXKRYTSKQLKNGWDYMKRQYLIWSKMMTMXGHGYNSVT 129

Query: 644 NTFNFTDEEWELESKANKHVDSLRTSPLSFPELCTQLYDGAAATGIDGWG---------- 495
            TF++  E+WE   +        R  PL+  E    L++G  ATG   W           
Sbjct: 130 KTFDWXAEKWEEYLQKYPETKQFRFKPLANVEELEALFEGVLATGSKNWSSGGVIASGAE 189

Query: 494 PTSKRDRTVEPNKDLEIVSIEDIPFST 414
            +S    ++     + +   ED+P +T
Sbjct: 190 ESSTHSTSMPSETSISLEEDEDLPRNT 216


>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 35/109 (32%), Positives = 52/109 (47%)
 Frame = -2

Query: 824 RLGGSLKPYSWSTVGEILKNTHNFIVDHKQMKNRYDYIKGKYTAWCQLKRKTGNHYDPTT 645
           R  G LK  +W  + E L+         KQ+KN +DY+K +Y  W ++   TG+ Y+  T
Sbjct: 62  RSSGGLKSSAWPRIAEELEKLLGKRFTSKQLKNEWDYMKRQYLIWSKMMTMTGHGYNSVT 121

Query: 644 NTFNFTDEEWELESKANKHVDSLRTSPLSFPELCTQLYDGAAATGIDGW 498
            TF++  E+WE   +        R  PL+  E    L+ G  ATG   W
Sbjct: 122 KTFDWPAEKWEEYLQKYPEAKQFRFKPLANMEELEALFGGVLATGSKNW 170


>ref|XP_003628341.1| PIF-like protein [Medicago truncatula] gi|355522363|gb|AET02817.1|
           PIF-like protein [Medicago truncatula]
          Length = 289

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
 Frame = -2

Query: 824 RLGGSLKPYSWSTVGEILKNTHNFIVDHKQMKNRYDYIKGKYTAWCQL-KRKTGNHYDPT 648
           R+G S     W+ +     N      +  Q+KNRYD ++  + AW  L  R+TG  +DP 
Sbjct: 46  RVGTSFTKKGWNNIKAQFHNLTGLKYEKAQLKNRYDSLRKDWRAWYNLFGRETGLGWDPV 105

Query: 647 TNTFNFTDEEWELESKANKHVDSLRTSPLSFPELCTQLYDGAAATGIDGWGPTSKRDRTV 468
            NT    DE WE +   N   +  R   L F    T L+    A G   W P+      V
Sbjct: 106 NNTVVAPDEWWETKQLENPPYEKFRNKGLPFSNELTTLFKDVVANGEYTWAPSCGVLACV 165

Query: 467 EPNKDLEIVSIE 432
             N D ++V++E
Sbjct: 166 FENDDNDVVAVE 177


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