BLASTX nr result

ID: Panax21_contig00008463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008463
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332150.1| argonaute protein group [Populus trichocarpa...   141   5e-32
ref|XP_002520550.1| eukaryotic translation initiation factor 2c,...   137   1e-30
ref|XP_003633060.1| PREDICTED: protein argonaute 2-like [Vitis v...   135   3e-30
emb|CBI29065.3| unnamed protein product [Vitis vinifera]              135   3e-30
emb|CAN62291.1| hypothetical protein VITISV_027314 [Vitis vinifera]   133   2e-29

>ref|XP_002332150.1| argonaute protein group [Populus trichocarpa]
            gi|222875200|gb|EEF12331.1| argonaute protein group
            [Populus trichocarpa]
          Length = 1020

 Score =  141 bits (356), Expect = 5e-32
 Identities = 74/115 (64%), Positives = 88/115 (76%), Gaps = 6/115 (5%)
 Frame = +1

Query: 19   PKLIVFAAENGHHTRLFLKNKGRDVHHNLSPGTVLDTKIVHLFSYDFY---HYENLGTSK 189
            P + +  A+  H TRLFL++ GR    N+SPGTV+DTKIVH F YDFY   HY +LGTSK
Sbjct: 859  PTITLIVAQKRHQTRLFLEDGGRI--GNVSPGTVVDTKIVHPFEYDFYLCSHYGSLGTSK 916

Query: 190  PTHYYV---QHTFTSDQLQKFIY*LCFTFAQCTKPVSLVPPVYYTAQLVAYRGRM 345
            PTHY+V   +H  +SDQLQK IY +CFTFA+CTKPVSLVPPVYY A LVAYRGR+
Sbjct: 917  PTHYHVLWDEHGLSSDQLQKLIYDMCFTFARCTKPVSLVPPVYY-ADLVAYRGRL 970


>ref|XP_002520550.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540264|gb|EEF41836.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 492

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/115 (60%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
 Frame = +1

Query: 19  PKLIVFAAENGHHTRLFLKNKGRDVHHNLSPGTVLDTKIVHLFSYDFY---HYENLGTSK 189
           P + +  A+  H TRLF        + N++PGTV+DTKIVH F +DFY   HY +LGTSK
Sbjct: 329 PTVTLIVAQKRHQTRLFPARSDGSSNGNVTPGTVVDTKIVHPFEFDFYLCSHYGSLGTSK 388

Query: 190 PTHYYV---QHTFTSDQLQKFIY*LCFTFAQCTKPVSLVPPVYYTAQLVAYRGRM 345
           PTHY+V   +H F+SDQLQK IY +C+TFA+CTKPVSLVPPVYY A LVAYRGR+
Sbjct: 389 PTHYHVLWDEHGFSSDQLQKLIYNMCYTFARCTKPVSLVPPVYY-ADLVAYRGRL 442


>ref|XP_003633060.1| PREDICTED: protein argonaute 2-like [Vitis vinifera]
          Length = 979

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/115 (60%), Positives = 82/115 (71%), Gaps = 6/115 (5%)
 Frame = +1

Query: 19   PKLIVFAAENGHHTRLFLKNKGRDVHHNLSPGTVLDTKIVHLFSYDFY---HYENLGTSK 189
            P + +  A   H TRLF K   R  + N+ PGTV+DT +VHL  +DFY   HY  LGTSK
Sbjct: 817  PTITLIVARKRHLTRLFPKVNDRSFNGNVPPGTVVDTTVVHLSEFDFYLCSHYGTLGTSK 876

Query: 190  PTHYYV---QHTFTSDQLQKFIY*LCFTFAQCTKPVSLVPPVYYTAQLVAYRGRM 345
            PTHY+V   +H F+SDQ+QK IY LCFTFA+CTKPVSLVPPVYY A L AYRGR+
Sbjct: 877  PTHYHVLHDEHRFSSDQIQKLIYNLCFTFARCTKPVSLVPPVYY-ADLAAYRGRL 930


>emb|CBI29065.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/115 (60%), Positives = 82/115 (71%), Gaps = 6/115 (5%)
 Frame = +1

Query: 19   PKLIVFAAENGHHTRLFLKNKGRDVHHNLSPGTVLDTKIVHLFSYDFY---HYENLGTSK 189
            P + +  A   H TRLF K   R  + N+ PGTV+DT +VHL  +DFY   HY  LGTSK
Sbjct: 817  PTITLIVARKRHLTRLFPKVNDRSFNGNVPPGTVVDTTVVHLSEFDFYLCSHYGTLGTSK 876

Query: 190  PTHYYV---QHTFTSDQLQKFIY*LCFTFAQCTKPVSLVPPVYYTAQLVAYRGRM 345
            PTHY+V   +H F+SDQ+QK IY LCFTFA+CTKPVSLVPPVYY A L AYRGR+
Sbjct: 877  PTHYHVLHDEHRFSSDQIQKLIYNLCFTFARCTKPVSLVPPVYY-ADLAAYRGRL 930


>emb|CAN62291.1| hypothetical protein VITISV_027314 [Vitis vinifera]
          Length = 1270

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 6/113 (5%)
 Frame = +1

Query: 25   LIVFAAENGHHTRLFLKNKGRDVHHNLSPGTVLDTKIVHLFSYDFY---HYENLGTSKPT 195
            + +  A   H TRLF K   R  + N+ PGTV+DT +VHL  +DFY   HY  LGTSKPT
Sbjct: 786  ITLIVARKRHLTRLFPKVNDRSFNGNVPPGTVVDTTVVHLSEFDFYLCSHYGTLGTSKPT 845

Query: 196  HYYV---QHTFTSDQLQKFIY*LCFTFAQCTKPVSLVPPVYYTAQLVAYRGRM 345
            HY+V   +H F+SDQ+QK IY LCFTFA+CTKPVSLVPPVYY A L AYRGR+
Sbjct: 846  HYHVLHDEHRFSSDQIQKLIYNLCFTFARCTKPVSLVPPVYY-ADLAAYRGRL 897


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