BLASTX nr result
ID: Panax21_contig00008445
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00008445 (428 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321911.1| predicted protein [Populus trichocarpa] gi|1... 285 2e-75 gb|ABK21275.1| unknown [Picea sitchensis] 283 1e-74 ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec... 282 2e-74 ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec... 282 2e-74 ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p... 281 3e-74 >ref|XP_002321911.1| predicted protein [Populus trichocarpa] gi|118487488|gb|ABK95571.1| unknown [Populus trichocarpa] gi|222868907|gb|EEF06038.1| predicted protein [Populus trichocarpa] Length = 202 Score = 285 bits (730), Expect = 2e-75 Identities = 133/140 (95%), Positives = 138/140 (98%) Frame = +1 Query: 7 SYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKL 186 +YMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL Sbjct: 42 NYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL 101 Query: 187 AANSPSLQPNWQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLYLVYLSEREYFAVP 366 ANSP+L P+WQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLYLV+LSEREYFAVP Sbjct: 102 GANSPALVPDWQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVP 161 Query: 367 KNLKLLAVPLFELYDNVQRY 426 KNLKLLAVPLFELYDNVQRY Sbjct: 162 KNLKLLAVPLFELYDNVQRY 181 >gb|ABK21275.1| unknown [Picea sitchensis] Length = 177 Score = 283 bits (724), Expect = 1e-74 Identities = 131/140 (93%), Positives = 138/140 (98%) Frame = +1 Query: 7 SYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKL 186 +YMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENE+EGLKRKLSSKL Sbjct: 17 NYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLSSKL 76 Query: 187 AANSPSLQPNWQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLYLVYLSEREYFAVP 366 AANS +LQP+WQIGECVA WWRPNFET+MYPYCPPHITKPKECKKL+LV+LSEREYFAVP Sbjct: 77 AANSTTLQPDWQIGECVAVWWRPNFETLMYPYCPPHITKPKECKKLFLVHLSEREYFAVP 136 Query: 367 KNLKLLAVPLFELYDNVQRY 426 KNLKLLAVPLFELYDNVQRY Sbjct: 137 KNLKLLAVPLFELYDNVQRY 156 >ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 5 isoform 1 [Vitis vinifera] gi|297745235|emb|CBI40315.3| unnamed protein product [Vitis vinifera] Length = 200 Score = 282 bits (722), Expect = 2e-74 Identities = 132/140 (94%), Positives = 138/140 (98%) Frame = +1 Query: 7 SYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKL 186 +YMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKL Sbjct: 40 NYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKL 99 Query: 187 AANSPSLQPNWQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLYLVYLSEREYFAVP 366 AANS +LQP+WQIGECVA WWRPNFETIMYPYCPPHITKPKECKKL++V+LSEREYFAVP Sbjct: 100 AANSLALQPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVP 159 Query: 367 KNLKLLAVPLFELYDNVQRY 426 KNLKLLAVPLFELYDNVQRY Sbjct: 160 KNLKLLAVPLFELYDNVQRY 179 >ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 5-like [Cucumis sativus] gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 5-like [Cucumis sativus] Length = 200 Score = 282 bits (721), Expect = 2e-74 Identities = 130/140 (92%), Positives = 137/140 (97%) Frame = +1 Query: 7 SYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKL 186 +YMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL Sbjct: 40 NYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL 99 Query: 187 AANSPSLQPNWQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLYLVYLSEREYFAVP 366 ANSPSLQP+WQIGECVA WWRPNFET+MYPYCPPHITKPKECKKL++V+LSEREYFAVP Sbjct: 100 GANSPSLQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVP 159 Query: 367 KNLKLLAVPLFELYDNVQRY 426 KNLKLLAVPLFELYDNVQRY Sbjct: 160 KNLKLLAVPLFELYDNVQRY 179 >ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus communis] Length = 200 Score = 281 bits (720), Expect = 3e-74 Identities = 131/140 (93%), Positives = 137/140 (97%) Frame = +1 Query: 7 SYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKL 186 +YMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL Sbjct: 40 NYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL 99 Query: 187 AANSPSLQPNWQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLYLVYLSEREYFAVP 366 ANSP+L P+WQIGECVA WWRPNFETIMYPYCPPHITKPKECKKL+LV+LSEREYFAVP Sbjct: 100 GANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVP 159 Query: 367 KNLKLLAVPLFELYDNVQRY 426 KNLKLLAVPLFELYDNVQRY Sbjct: 160 KNLKLLAVPLFELYDNVQRY 179