BLASTX nr result

ID: Panax21_contig00008444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008444
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279069.2| PREDICTED: uncharacterized protein LOC100258...   147   2e-33
ref|XP_002299808.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247...   137   2e-30
ref|XP_002308218.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus ...   129   4e-28

>ref|XP_002279069.2| PREDICTED: uncharacterized protein LOC100258653 [Vitis vinifera]
           gi|297745897|emb|CBI15953.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  147 bits (371), Expect = 2e-33
 Identities = 68/94 (72%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
 Frame = -2

Query: 661 SLGSSYDSISHDEEELDKWLAVVYSDGKLL-EGETNSNPQRLCVICFDAPRDCFFLPCGH 485
           S GSSYDSISHDEE+L++WLAV   +G +  EGE N NP+RLCVIC DAPRDCFFLPCGH
Sbjct: 392 SWGSSYDSISHDEEDLEEWLAVSSLEGNISKEGENNGNPRRLCVICCDAPRDCFFLPCGH 451

Query: 484 SATCFTCGTRIIDEAGTCPICCRTMKKVRKIIAV 383
            A CFTCGTRI +EAG+CPIC + MKKVRKI  V
Sbjct: 452 CAACFTCGTRISEEAGSCPICRKKMKKVRKIFTV 485


>ref|XP_002299808.1| predicted protein [Populus trichocarpa] gi|222847066|gb|EEE84613.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  137 bits (344), Expect = 2e-30
 Identities = 66/94 (70%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
 Frame = -2

Query: 661 SLGSSYDSISHDEEELDKWLAVVYSDGK-LLEGETNSNPQRLCVICFDAPRDCFFLPCGH 485
           S GSSYDS SH+EE+L+KWLAV   +GK + EGE   N +RLCVICFDAPRDCFFLPCGH
Sbjct: 305 SWGSSYDSNSHEEEDLEKWLAVNCIEGKSVAEGE---NLRRLCVICFDAPRDCFFLPCGH 361

Query: 484 SATCFTCGTRIIDEAGTCPICCRTMKKVRKIIAV 383
            A CFTCGTRI +E G CPIC R++KKVRKI  V
Sbjct: 362 CAACFTCGTRIAEEVGVCPICRRSLKKVRKIFTV 395


>ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247198 [Vitis vinifera]
           gi|296083155|emb|CBI22791.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score =  137 bits (344), Expect = 2e-30
 Identities = 65/94 (69%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = -2

Query: 661 SLGSSYDSISHDEEELDKWLAVVYSDGK-LLEGETNSNPQRLCVICFDAPRDCFFLPCGH 485
           S  SSYDS SHDEE+    L V   DGK   +GE NSNP+RLC ICFDAPRDCFFLPCGH
Sbjct: 386 SWDSSYDSASHDEEDAQDKLGVGGLDGKPKKDGENNSNPKRLCTICFDAPRDCFFLPCGH 445

Query: 484 SATCFTCGTRIIDEAGTCPICCRTMKKVRKIIAV 383
              CFTCGTRI++E GTCPIC R MKKVRKI  V
Sbjct: 446 CVACFTCGTRILEEDGTCPICSRNMKKVRKIFTV 479


>ref|XP_002308218.1| predicted protein [Populus trichocarpa] gi|222854194|gb|EEE91741.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  130 bits (328), Expect = 2e-28
 Identities = 58/93 (62%), Positives = 70/93 (75%)
 Frame = -2

Query: 661 SLGSSYDSISHDEEELDKWLAVVYSDGKLLEGETNSNPQRLCVICFDAPRDCFFLPCGHS 482
           S GSSYDS+S+DEE+L+ +LA    +GK  +GE  +N +RLC ICFDAPR+CFFLPCGH 
Sbjct: 43  SWGSSYDSVSNDEEDLEDFLAAGSLEGKSRDGENGNNTRRLCAICFDAPRECFFLPCGHR 102

Query: 481 ATCFTCGTRIIDEAGTCPICCRTMKKVRKIIAV 383
             CF CGTRI +  GTCPIC R +KKVRKI  V
Sbjct: 103 VACFACGTRIAEADGTCPICRRNLKKVRKIFTV 135


>ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532481|gb|EEF34271.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 460

 Score =  129 bits (325), Expect = 4e-28
 Identities = 60/94 (63%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
 Frame = -2

Query: 661 SLGSSYDSISHDEEELDKWLAVVYSDGKLL-EGETNSNPQRLCVICFDAPRDCFFLPCGH 485
           S GSSYDS+S+DEE+L+  LA    +GKL  +GE  +N QRLC ICFDAPRDCFFLPCGH
Sbjct: 367 SWGSSYDSVSNDEEDLEHLLASGSLEGKLSGDGENVNNTQRLCAICFDAPRDCFFLPCGH 426

Query: 484 SATCFTCGTRIIDEAGTCPICCRTMKKVRKIIAV 383
              CF CGTRI++  GTCP+C + MKKVRKI  V
Sbjct: 427 CIACFECGTRIVEAGGTCPVCHKNMKKVRKIFTV 460


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