BLASTX nr result

ID: Panax21_contig00008427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008427
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]     80   1e-12
gb|ABK23996.1| unknown [Picea sitchensis] gi|116793880|gb|ABK269...    80   1e-12
ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [...    79   3e-12
ref|XP_003559974.1| PREDICTED: 40S ribosomal protein S3-3-like [...    79   3e-12
ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [...    79   3e-12

>dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 230

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = +1

Query: 976  GVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHPVKEDEEF 1095
            GVLGIKVKIMLDWDPKGKQGP TPLPD+VTIHP K+D+EF
Sbjct: 180  GVLGIKVKIMLDWDPKGKQGPATPLPDLVTIHPPKDDDEF 219


>gb|ABK23996.1| unknown [Picea sitchensis] gi|116793880|gb|ABK26916.1| unknown [Picea
            sitchensis]
          Length = 233

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +1

Query: 976  GVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHPVKEDEEF 1095
            GVLGIKVKIMLDWDPKGKQGPTTPLPD+VTIH  KE+EEF
Sbjct: 180  GVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEF 219


>ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
            gi|449488075|ref|XP_004157933.1| PREDICTED: 40S ribosomal
            protein S3-3-like [Cucumis sativus]
          Length = 243

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = +1

Query: 976  GVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHPVKEDEE 1092
            GVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIH  KE+EE
Sbjct: 180  GVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEE 218


>ref|XP_003559974.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium distachyon]
          Length = 276

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 976  GVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHPVKEDEEF 1095
            GVLGIKVKIMLDWDPKGKQGP TPLPD+VTIHP K+++EF
Sbjct: 226  GVLGIKVKIMLDWDPKGKQGPATPLPDLVTIHPPKDEDEF 265


>ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
            gi|296081703|emb|CBI20708.3| unnamed protein product
            [Vitis vinifera]
          Length = 235

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = +1

Query: 976  GVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHPVKEDEEF 1095
            GVLGIKVKIMLDWDPKGKQGPTTPLPD+VTIH  KE+EE+
Sbjct: 180  GVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEY 219


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