BLASTX nr result

ID: Panax21_contig00008425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008425
         (1386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding prote...   202   1e-49
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   190   7e-46
emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]   189   2e-45
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   187   4e-45
ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486...   185   2e-44

>ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
            vinifera]
          Length = 413

 Score =  202 bits (515), Expect = 1e-49
 Identities = 127/267 (47%), Positives = 159/267 (59%), Gaps = 9/267 (3%)
 Frame = -1

Query: 1386 KNKKQAEKNAAMAAWSALKLLAQQS-ESCSQKLNNDEQEHVTVARALQKYRIRAK--ISN 1216
            KNKKQAEKNAAMAAWS+LK LA+++  S S+  NNDE E +T+ARAL  YR++ K  I+N
Sbjct: 136  KNKKQAEKNAAMAAWSSLKQLAKEAANSSSETENNDELEQITIARALLNYRLKEKMAIAN 195

Query: 1215 TP-----FPIRFPMPKPRPASTQPSPATASKILPLICTKTASRSRHVGTTVNNTSICPKP 1051
            +P     FP +FP+   R  S Q  P   SKILPLIC KT  R+R    T N+ S+ P  
Sbjct: 196  SPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNRPPSPTANDGSM-PSS 254

Query: 1050 IPQSRPTNATRIDILGCSKTSLQGQPIITCVNDVLPSAESPRFLPQKFPAAGAAPYIPVQ 871
             P+SRPT+ T  +           QP+   V  V P         Q+FPAAGA PY+P++
Sbjct: 255  QPRSRPTSTTSSE-----NPVPPSQPLALDVRAVRP---------QRFPAAGAVPYVPIR 300

Query: 870  HFR-PHHGIAPPVTIRKAIPAYSTXXXXXPSQSIQVRRPPSMGIAPPVCIRQAVPAFAAP 694
             FR P+HGIAPPVTIR A+P +S      P Q I   R P M IAPPVC+RQAVP FAAP
Sbjct: 301  QFRTPYHGIAPPVTIRNAVPVFSAPPSGLPPQVI---RAPHMRIAPPVCVRQAVPVFAAP 357

Query: 693  VRVEDSPAFKAPITPSSARVEDLPPAS 613
               ++ P       PS+A +  LP  S
Sbjct: 358  PVRKEDPLVVRKEDPSAASLPSLPTKS 384


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  190 bits (483), Expect = 7e-46
 Identities = 128/301 (42%), Positives = 164/301 (54%), Gaps = 12/301 (3%)
 Frame = -1

Query: 1386 KNKKQAEKNAAMAAWSALKLLAQQS-ESCSQKLNNDEQEHVTVARALQKYRIRAKISNT- 1213
            KNKKQAEKNAAMAAWS+LK LA+++  S ++  NNDE E +T+ARAL  YR++ KIS + 
Sbjct: 136  KNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIARALLNYRLKEKISMSN 195

Query: 1212 -----PFPIRFPMPKPRPASTQPSPATASKILPLICTKTASRSRHVGTTVNNTSICPKPI 1048
                 PFP +F +  PRP S QP PAT SKILPLIC K A RSRH+        +   P 
Sbjct: 196  SNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRHL--------VAASPA 247

Query: 1047 PQSRPTNATRIDILGCSKTSLQGQPIITCVNDVLPSAESPRFLPQ-KFPAAGAAPYIPVQ 871
            P S             S  S+  Q         LP+    R + + KFPAAGAAPY+P++
Sbjct: 248  PAS-------------SDNSVMPQ---------LPATPDSRGIRRPKFPAAGAAPYVPIR 285

Query: 870  HFRPHHGIAPPVTIRKAIPAYSTXXXXXPSQ-SIQVRRPPSMGIAPPVCIRQAVPAFAA- 697
              RP  G+APPVTIR AIP +S       +  S QV R P + +APPV IRQAVP FAA 
Sbjct: 286  QMRPCQGMAPPVTIRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAP 345

Query: 696  --PVRVEDSPAFKAPITPSSARVEDLPPASKVPITPPIRVEALPQPAFKSSITPAPIRVE 523
              PVR +D P       P +   +D P  S   +   +  +         +I P P  V+
Sbjct: 346  PPPVR-KDEPVPIPKDEPVAVPKDDSPTISAPSLEDKLPTKTPETETKTENIPPEPETVQ 404

Query: 522  N 520
            +
Sbjct: 405  S 405


>emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]
          Length = 403

 Score =  189 bits (479), Expect = 2e-45
 Identities = 122/267 (45%), Positives = 151/267 (56%), Gaps = 9/267 (3%)
 Frame = -1

Query: 1386 KNKKQAEKNAAMAAWSALKLLAQQSESCSQKL-NNDEQEHVTVARALQKYRIRAK--ISN 1216
            KNKKQAEKNAAMAAWS+LK LA+++ S S +  NNDE E +T+ARAL  YR++ K  I+N
Sbjct: 136  KNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIARALLNYRLKEKMAIAN 195

Query: 1215 TP-----FPIRFPMPKPRPASTQPSPATASKILPLICTKTASRSRHVGTTVNNTSICPKP 1051
            +P     FP +FP+   R  S Q  P   SKILPLIC KT  R+R    T N+      P
Sbjct: 196  SPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNRPPSPTANDD-----P 250

Query: 1050 IPQSRPTNATRIDILGCSKTSLQGQPIITCVNDVLPSAESPRFLPQKFPAAGAAPYIPVQ 871
              Q +  N                QP+   V  V P         Q+FPAAGA PY+P++
Sbjct: 251  RQQHQVKNPVP-----------PSQPLALDVRAVRP---------QRFPAAGAVPYVPIR 290

Query: 870  HFR-PHHGIAPPVTIRKAIPAYSTXXXXXPSQSIQVRRPPSMGIAPPVCIRQAVPAFAAP 694
             FR P+HGIAPPVTIR A+P +S      P Q I   R P M IAPPVC+RQAVP FAAP
Sbjct: 291  QFRTPYHGIAPPVTIRNAVPVFSAPPSGLPPQVI---RAPHMRIAPPVCVRQAVPVFAAP 347

Query: 693  VRVEDSPAFKAPITPSSARVEDLPPAS 613
               ++ P       PS+A +  LP  S
Sbjct: 348  PVRKEDPLVVRKEDPSAASLPSLPTKS 374


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
            gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  187 bits (476), Expect = 4e-45
 Identities = 131/327 (40%), Positives = 158/327 (48%), Gaps = 9/327 (2%)
 Frame = -1

Query: 1386 KNKKQAEKNAAMAAWSALKLLAQQS-ESCSQKLNNDEQEHVTVARALQKYRIRAKISNT- 1213
            KNKKQAEKNAAMAAWS+LK LA+++  S ++  NNDE E +T+ARAL  YR++ KIS + 
Sbjct: 136  KNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIARALLNYRLKEKISMSN 195

Query: 1212 -----PFPIRFPMPKPRPASTQPSPATASKILPLICTKTASRSRH-VGTTVNNTSICPKP 1051
                 PFP +F +  PRP S QP PA  SKILPLIC K A RSRH VG +    S     
Sbjct: 196  SNAPVPFPKKFQIQNPRPTSPQPPPAATSKILPLICQKAAPRSRHLVGASPARASCDNSA 255

Query: 1050 IPQSRPTNATRIDILGCSKTSLQGQPIITCVNDVLPSAESPRFLPQKFPAAGAAPYIPVQ 871
            +PQ   T                               ES      KFPAAGAAPY+P++
Sbjct: 256  MPQLSAT------------------------------PESRGIRRPKFPAAGAAPYVPIR 285

Query: 870  HFRPHHGIAPPVTIRKAIPAYSTXXXXXPSQSIQVRRPPSMGIAPPVCIRQAVPAFAAPV 691
              RP  G+APPVTIR AIP +S       + S QV R P + +APPV IRQAVP FA P 
Sbjct: 286  QMRPCQGMAPPVTIRTAIPVFS-PPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFATP- 343

Query: 690  RVEDSPAFKAPITPSSARVEDLPPASKVPITPPIRVEALPQPAFKSSITPAPIRVENPPT 511
                                           PPIR +            P PI  + PPT
Sbjct: 344  ------------------------------PPPIRKD-----------EPVPIPKDEPPT 362

Query: 510  SKGPISPGPPTPVDNPPI-SRASTIPP 433
               P SP    P   P   ++   IPP
Sbjct: 363  ISAP-SPEDKLPAKTPEAETKTENIPP 388


>ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486298|gb|AES67501.1|
            Ribonuclease [Medicago truncatula]
          Length = 408

 Score =  185 bits (470), Expect = 2e-44
 Identities = 124/288 (43%), Positives = 160/288 (55%), Gaps = 8/288 (2%)
 Frame = -1

Query: 1386 KNKKQAEKNAAMAAWSALKLLAQQSESCS-QKLNNDEQEHVTVARALQKYRIRAKISNT- 1213
            KNKKQAEKNAAMAAWS+LK LA+++ S S +  NNDE E +T+ARAL  YR++ K+S + 
Sbjct: 136  KNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMSMSN 195

Query: 1212 -----PFPIRFPMPKPRPASTQPSPATASKILPLICTKTASRSRHVGTTVNNTSICPKPI 1048
                 PF  +F +   RP S+Q SPAT SKILPLIC KT  R+R    T N         
Sbjct: 196  PNARIPFQKKFQIQNIRPTSSQ-SPATTSKILPLICQKTGPRNRPSSATPNEN------- 247

Query: 1047 PQSRPTNATRIDILGCSKTSLQGQPIITCVNDVLPSAESPRFLPQKFPAAGAAPYIPVQH 868
            P+SR   A        S  S+  QP  + +       ES    P +FPAAGA PY+P++ 
Sbjct: 248  PRSRHPQAA-----ATSDKSILQQPQSSAI-------ESRVTRPLRFPAAGAPPYVPIRQ 295

Query: 867  FRPHHGIAPPVTIRKAIPAYSTXXXXXPSQSIQVRRPPSMGIAPPVCIRQAVPAFAAPVR 688
             RP HGIAP V++R  IP +S      P+   Q+ R P + IAPPV IRQAVP FAAP  
Sbjct: 296  MRPCHGIAPAVSVRTVIPVFSAPPLPPPTSVHQIIRAPPVRIAPPVSIRQAVPVFAAPPL 355

Query: 687  VEDSPA-FKAPITPSSARVEDLPPASKVPITPPIRVEALPQPAFKSSI 547
             +D PA  +  +  SS  VE     +K+         + PQP    S+
Sbjct: 356  RKDEPAPIQKDLPASSTPVEQDKLPAKILEMDKTENNSPPQPETLQSL 403


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