BLASTX nr result

ID: Panax21_contig00008420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008420
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25599.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3...   149   3e-34
ref|XP_004145519.1| PREDICTED: homeobox protein knotted-1-like 3...   144   1e-32
gb|AAD09582.1| homeobox 1 protein, partial [Solanum lycopersicum]     144   1e-32
ref|NP_001233945.1| homeobox protein knotted-1-like LET12 [Solan...   144   1e-32

>emb|CBI25599.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  149 bits (376), Expect = 3e-34
 Identities = 75/104 (72%), Positives = 81/104 (77%)
 Frame = +1

Query: 262 MVLNMQFEDGISELILTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSP 441
           ++ N   +D   +  +THYVLLL SFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSP
Sbjct: 192 VLANQPLDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSP 251

Query: 442 VEGTGATMXXXXXXXXXXXTNLFDGSLDGPDSMGFGPLVPTESE 573
            EGTGATM            NLFDGSLDGPDSMGFGPLVPTE+E
Sbjct: 252 GEGTGATMSDDEDDQADSEINLFDGSLDGPDSMGFGPLVPTETE 295


>ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3 [Vitis vinifera]
          Length = 430

 Score =  149 bits (376), Expect = 3e-34
 Identities = 75/104 (72%), Positives = 81/104 (77%)
 Frame = +1

Query: 262 MVLNMQFEDGISELILTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSP 441
           ++ N   +D   +  +THYVLLL SFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSP
Sbjct: 220 VLANQPLDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSP 279

Query: 442 VEGTGATMXXXXXXXXXXXTNLFDGSLDGPDSMGFGPLVPTESE 573
            EGTGATM            NLFDGSLDGPDSMGFGPLVPTE+E
Sbjct: 280 GEGTGATMSDDEDDQADSEINLFDGSLDGPDSMGFGPLVPTETE 323


>ref|XP_004145519.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
           gi|449485171|ref|XP_004157089.1| PREDICTED: homeobox
           protein knotted-1-like 3-like [Cucumis sativus]
          Length = 455

 Score =  144 bits (363), Expect = 1e-32
 Identities = 71/101 (70%), Positives = 80/101 (79%)
 Frame = +1

Query: 271 NMQFEDGISELILTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPVEG 450
           +M  +D   +  +THYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSP EG
Sbjct: 248 SMVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWDIEQSLQSLTGVSPGEG 307

Query: 451 TGATMXXXXXXXXXXXTNLFDGSLDGPDSMGFGPLVPTESE 573
           TGATM            N+FDGSLDGPD+MGFGPL+PTESE
Sbjct: 308 TGATMSDDDDDQVDSDANVFDGSLDGPDTMGFGPLIPTESE 348


>gb|AAD09582.1| homeobox 1 protein, partial [Solanum lycopersicum]
          Length = 392

 Score =  144 bits (363), Expect = 1e-32
 Identities = 72/97 (74%), Positives = 76/97 (78%)
 Frame = +1

Query: 283 EDGISELILTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPVEGTGAT 462
           +D   +  +THYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGV+P EGTGAT
Sbjct: 183 DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGTGAT 242

Query: 463 MXXXXXXXXXXXTNLFDGSLDGPDSMGFGPLVPTESE 573
           M           TN  DG  DGPDSMGFGPLVPTESE
Sbjct: 243 MSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESE 279


>ref|NP_001233945.1| homeobox protein knotted-1-like LET12 [Solanum lycopersicum]
           gi|6016226|sp|O22300.1|LET12_SOLLC RecName:
           Full=Homeobox protein knotted-1-like LET12
           gi|2529703|gb|AAC49918.1| class II knotted-like
           homeodomain protein [Solanum lycopersicum]
          Length = 426

 Score =  144 bits (363), Expect = 1e-32
 Identities = 72/97 (74%), Positives = 76/97 (78%)
 Frame = +1

Query: 283 EDGISELILTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPVEGTGAT 462
           +D   +  +THYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGV+P EGTGAT
Sbjct: 221 DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGTGAT 280

Query: 463 MXXXXXXXXXXXTNLFDGSLDGPDSMGFGPLVPTESE 573
           M           TN  DG  DGPDSMGFGPLVPTESE
Sbjct: 281 MSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESE 317


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