BLASTX nr result

ID: Panax21_contig00008416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008416
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528242.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ri...   165   9e-39
ref|XP_003628547.1| 3-hydroxybutyryl-CoA dehydrogenase-like prot...   163   3e-38
ref|NP_001234958.1| peroxisomal 3-hydroxyacyl-CoA dehydrogenase-...   161   1e-37
ref|XP_002285093.1| PREDICTED: 3-hydroxybutyryl-CoA dehydrogenas...   160   2e-37
emb|CAN67802.1| hypothetical protein VITISV_020497 [Vitis vinifera]   160   4e-37

>ref|XP_002528242.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
           gi|223532328|gb|EEF34127.1| 3-hydroxyacyl-CoA
           dehyrogenase, putative [Ricinus communis]
          Length = 296

 Score =  165 bits (418), Expect = 9e-39
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   TGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKYTPCPLLVQY 181
           TGVA+KEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKY PCPLLVQY
Sbjct: 207 TGVASKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKYLPCPLLVQY 266

Query: 182 VDAGRLGRKRGIGVYNYNKVSKENKPS 262
           VDAGRLGRK+GIGVYNY K +++ KPS
Sbjct: 267 VDAGRLGRKQGIGVYNYRKTTEQAKPS 293


>ref|XP_003628547.1| 3-hydroxybutyryl-CoA dehydrogenase-like protein [Medicago
           truncatula] gi|355522569|gb|AET03023.1|
           3-hydroxybutyryl-CoA dehydrogenase-like protein
           [Medicago truncatula]
          Length = 296

 Score =  163 bits (413), Expect = 3e-38
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +2

Query: 2   TGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKYTPCPLLVQY 181
           T VATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGD+KY+PCPLLVQY
Sbjct: 207 TNVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDNKYSPCPLLVQY 266

Query: 182 VDAGRLGRKRGIGVYNYNKVSKENKPSS 265
           VDAGRLGRKRGIGVY+Y+K  K +K SS
Sbjct: 267 VDAGRLGRKRGIGVYDYSKEQKSSKSSS 294


>ref|NP_001234958.1| peroxisomal 3-hydroxyacyl-CoA dehydrogenase-like protein [Glycine
           max] gi|167963343|dbj|BAG09365.1| peroxisomal
           3-hydroxyacyl-CoA dehydrogenase-like protein [Glycine
           max]
          Length = 319

 Score =  161 bits (408), Expect = 1e-37
 Identities = 77/88 (87%), Positives = 81/88 (92%)
 Frame = +2

Query: 2   TGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKYTPCPLLVQY 181
           TGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIM+VLHAGLGD+KY PCPLLVQY
Sbjct: 230 TGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMRVLHAGLGDNKYAPCPLLVQY 289

Query: 182 VDAGRLGRKRGIGVYNYNKVSKENKPSS 265
           VDAGRLGRKRGIGVY Y+K  +  K SS
Sbjct: 290 VDAGRLGRKRGIGVYEYSKDPRSTKSSS 317


>ref|XP_002285093.1| PREDICTED: 3-hydroxybutyryl-CoA dehydrogenase [Vitis vinifera]
           gi|302142978|emb|CBI20273.3| unnamed protein product
           [Vitis vinifera]
          Length = 296

 Score =  160 bits (406), Expect = 2e-37
 Identities = 78/88 (88%), Positives = 80/88 (90%)
 Frame = +2

Query: 2   TGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKYTPCPLLVQY 181
           TGVATK+DIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKY PCPLL QY
Sbjct: 207 TGVATKKDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKYVPCPLLQQY 266

Query: 182 VDAGRLGRKRGIGVYNYNKVSKENKPSS 265
           VDAGRLGRKRGIGVYNY KV+     SS
Sbjct: 267 VDAGRLGRKRGIGVYNYRKVTGATNLSS 294


>emb|CAN67802.1| hypothetical protein VITISV_020497 [Vitis vinifera]
          Length = 301

 Score =  160 bits (404), Expect = 4e-37
 Identities = 76/81 (93%), Positives = 78/81 (96%)
 Frame = +2

Query: 2   TGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKYTPCPLLVQY 181
           TGVATK+DIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKY PCPLL QY
Sbjct: 207 TGVATKKDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHAGLGDSKYVPCPLLQQY 266

Query: 182 VDAGRLGRKRGIGVYNYNKVS 244
           VDAGRLGRKRGIGVYNY K+S
Sbjct: 267 VDAGRLGRKRGIGVYNYRKLS 287


Top