BLASTX nr result

ID: Panax21_contig00008413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008413
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19761.3| unnamed protein product [Vitis vinifera]              142   9e-32
ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methy...   142   9e-32
ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methy...   131   1e-28
ref|XP_002891309.1| tetrapyrrole methylase family protein [Arabi...   129   8e-28
ref|NP_175126.2| tetrapyrrole (corrin/porphyrin)methylase [Arabi...   129   8e-28

>emb|CBI19761.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  142 bits (357), Expect = 9e-32
 Identities = 69/99 (69%), Positives = 79/99 (79%)
 Frame = +2

Query: 425 AKLCVDKNIPVTPIXXXXXXXXXXXXXXXXTDEFTFVGFLPKHAGTRKERLSVSANEATT 604
           AKLCVD+NIPV PI                T+EFTFVGFLPKHAG+R+ERL+VSANEA T
Sbjct: 183 AKLCVDENIPVIPIPGPSALVAALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEAAT 242

Query: 605 QIFFVPPHKLCQFLEETYSVFGDSRRCVLAREITKIHEE 721
           Q+FFVPPHKL QFLEET S+FGD+RRCV+ARE+TKIHEE
Sbjct: 243 QVFFVPPHKLHQFLEETSSLFGDTRRCVIAREMTKIHEE 281


>ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 351

 Score =  142 bits (357), Expect = 9e-32
 Identities = 69/99 (69%), Positives = 79/99 (79%)
 Frame = +2

Query: 425 AKLCVDKNIPVTPIXXXXXXXXXXXXXXXXTDEFTFVGFLPKHAGTRKERLSVSANEATT 604
           AKLCVD+NIPV PI                T+EFTFVGFLPKHAG+R+ERL+VSANEA T
Sbjct: 160 AKLCVDENIPVIPIPGPSALVAALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEAAT 219

Query: 605 QIFFVPPHKLCQFLEETYSVFGDSRRCVLAREITKIHEE 721
           Q+FFVPPHKL QFLEET S+FGD+RRCV+ARE+TKIHEE
Sbjct: 220 QVFFVPPHKLHQFLEETSSLFGDTRRCVIAREMTKIHEE 258


>ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
           [Cucumis sativus] gi|449515758|ref|XP_004164915.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 365

 Score =  131 bits (330), Expect = 1e-28
 Identities = 63/98 (64%), Positives = 74/98 (75%)
 Frame = +2

Query: 428 KLCVDKNIPVTPIXXXXXXXXXXXXXXXXTDEFTFVGFLPKHAGTRKERLSVSANEATTQ 607
           +LCV++NIPV P+                TDEFTFVGFLPKHA +R+ERL VSANE  TQ
Sbjct: 174 RLCVNENIPVVPVPGPSAVVAAISASGLSTDEFTFVGFLPKHAASRRERLMVSANEEATQ 233

Query: 608 IFFVPPHKLCQFLEETYSVFGDSRRCVLAREITKIHEE 721
           IF+VPPHKL QFLEET  +FG+SRRCV+ARE+TKIHEE
Sbjct: 234 IFYVPPHKLKQFLEETSQLFGESRRCVIAREMTKIHEE 271


>ref|XP_002891309.1| tetrapyrrole methylase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337151|gb|EFH67568.1| tetrapyrrole
           methylase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 342

 Score =  129 bits (323), Expect = 8e-28
 Identities = 63/99 (63%), Positives = 72/99 (72%)
 Frame = +2

Query: 425 AKLCVDKNIPVTPIXXXXXXXXXXXXXXXXTDEFTFVGFLPKHAGTRKERLSVSANEATT 604
           AK+C  +NI V PI                TDEFTFVGFLPKH+GTRKERL VS+NE  T
Sbjct: 150 AKMCAKENIDVIPIPGACAVVAALSASGLDTDEFTFVGFLPKHSGTRKERLVVSSNETRT 209

Query: 605 QIFFVPPHKLCQFLEETYSVFGDSRRCVLAREITKIHEE 721
           QIF+VPPHKL QFLEET   FG+SR+CV+AREITK+HEE
Sbjct: 210 QIFYVPPHKLSQFLEETSPYFGESRQCVIAREITKLHEE 248


>ref|NP_175126.2| tetrapyrrole (corrin/porphyrin)methylase [Arabidopsis thaliana]
           gi|34365739|gb|AAQ65181.1| At1g45110 [Arabidopsis
           thaliana] gi|110738768|dbj|BAF01308.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332193960|gb|AEE32081.1| tetrapyrrole
           (corrin/porphyrin)methylase [Arabidopsis thaliana]
          Length = 343

 Score =  129 bits (323), Expect = 8e-28
 Identities = 63/99 (63%), Positives = 72/99 (72%)
 Frame = +2

Query: 425 AKLCVDKNIPVTPIXXXXXXXXXXXXXXXXTDEFTFVGFLPKHAGTRKERLSVSANEATT 604
           AK+C  +NI V PI                TDEFTFVGFLPKH+GTRKERL VS+NE  T
Sbjct: 149 AKMCAKENIDVIPIPGACAVVAALSASGLETDEFTFVGFLPKHSGTRKERLIVSSNETRT 208

Query: 605 QIFFVPPHKLCQFLEETYSVFGDSRRCVLAREITKIHEE 721
           QIF+VPPHKL QFLEET   FG+SR+CV+AREITK+HEE
Sbjct: 209 QIFYVPPHKLSQFLEETTPYFGESRQCVIAREITKLHEE 247


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