BLASTX nr result

ID: Panax21_contig00008392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008392
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...   352   1e-94
ref|XP_002532714.1| conserved hypothetical protein [Ricinus comm...   316   7e-84
emb|CBI33105.3| unnamed protein product [Vitis vinifera]              311   2e-82
ref|XP_003529662.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...   295   1e-77
ref|XP_003549564.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...   286   8e-75

>ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Vitis vinifera]
          Length = 893

 Score =  352 bits (902), Expect = 1e-94
 Identities = 187/327 (57%), Positives = 241/327 (73%), Gaps = 7/327 (2%)
 Frame = +2

Query: 134  MSLVD-SSIDCVHQRI-----KRKLDDYGPTDDEDFSSELVSVRMRKDEPNAVNSSVTPQ 295
            MSLV+ SSIDCVHQR+     KRKLDDY    D+DFS +LVS RMRK + NA  S  +P 
Sbjct: 1    MSLVETSSIDCVHQRLDRLSSKRKLDDYSSPADDDFS-DLVSFRMRKFDQNAFVSCNSPP 59

Query: 296  DTHRSQFQPRVXXXXXXXXXXXXXXXLPKLQFFVRMISEGNTLVLQANSHDTVKSIHERI 475
            D+H  + +                    +LQFFVRMISEGNTLV+ ANS DTV+S+H RI
Sbjct: 60   DSHLERHRVVDARSCPSSCSAESARPDSRLQFFVRMISEGNTLVIHANSDDTVESLHHRI 119

Query: 476  QSITGIPVIEQRLIYRGKQLQWEQSLAACSIQNDAGLQLVGRMRSTEHPQAWQLIDQMVS 655
            QSITGIPV+EQRLIYRGKQLQWEQSLA CSIQNDAGLQLVGRMRSTEHP AW++  +MVS
Sbjct: 120  QSITGIPVMEQRLIYRGKQLQWEQSLAECSIQNDAGLQLVGRMRSTEHPAAWRVASEMVS 179

Query: 656  SICRMCKGEPVSSGKSVKSRLVEFLTTTPQKDTEQAAGHLQIFISSCAPAAMVMLYLSPD 835
            +ICR+C+GE     K++KS+L+EFL  TP+ DTE AAG+LQ+F+SS AP+A+VMLY+SP 
Sbjct: 180  TICRLCRGETFRPLKNIKSQLLEFLMLTPKDDTESAAGYLQVFMSSSAPSALVMLYMSPT 239

Query: 836  EGNKKCAEDLIRQFI-TSISMLPKTIHPQCAPILLEFCKLLRRASQDDAMYKLCRGSLGS 1012
            + NK+ A+D IRQF+ +S ++LPK++  QC PI+LEFCKLL R   +D +Y  CR +LGS
Sbjct: 240  KSNKETADDTIRQFLNSSRNLLPKSVQIQCVPIVLEFCKLLSRTDHEDPLYLTCRSTLGS 299

Query: 1013 MVEYIGIGRGTTTKNGDSNKTVIAFQD 1093
            +VE +G+ R   ++   ++KT+I  ++
Sbjct: 300  LVENVGVVR--ASRYCHNSKTLIVVKE 324


>ref|XP_002532714.1| conserved hypothetical protein [Ricinus communis]
            gi|223527541|gb|EEF29663.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 876

 Score =  316 bits (809), Expect = 7e-84
 Identities = 183/331 (55%), Positives = 227/331 (68%), Gaps = 28/331 (8%)
 Frame = +2

Query: 134  MSLVDS-SIDCV--------HQRI--KRKLDDYGPT--DDEDFS-SELVSVRMRKDEPNA 271
            MSLV S ++DC         H R+  KRK DDY P+  DD+DF+ ++LVSVRMRKDE  A
Sbjct: 1    MSLVQSPTVDCTTTAVNGHDHHRVSTKRKFDDYAPSLDDDDDFNFNDLVSVRMRKDESLA 60

Query: 272  VNSSVTPQDTHRS-----QFQPRVXXXXXXXXXXXXXXXLP-----KLQFFVRMISEGNT 421
            V+SS   ++   S         RV                P     ++QFF+RMIS+GN 
Sbjct: 61   VDSSSAGKNQSSSPSPSAHLDTRVSDAKSAHFSCSTSPPGPTRSASRVQFFIRMISDGNH 120

Query: 422  LVLQANSHDTVKSIHERIQSITGIPVIEQRLIYRGKQLQWEQSLAACSIQNDAGLQLVGR 601
            +V+ ANS DTVKSIHERI+ ITGIPV+EQRLIY+GKQLQWEQSLA CSIQNDAGL LVGR
Sbjct: 121  IVIHANSDDTVKSIHERIKIITGIPVMEQRLIYKGKQLQWEQSLAQCSIQNDAGLHLVGR 180

Query: 602  MRSTEHPQAWQLIDQMVSSICRMCK-GEPV--SSGKSVKSRLVEFLTTTPQKDTEQAAGH 772
            MRST+HPQ  QLID MVS I R+CK G P    + K +KS + EF + TP+ D E A GH
Sbjct: 181  MRSTKHPQTCQLIDDMVSFISRLCKAGLPCYPYASKHIKSLMNEFFSLTPKDDNESAIGH 240

Query: 773  LQIFISSCAPAAMVMLYLSPDEGNKKCAEDLIRQFITSI-SMLPKTIHPQCAPILLEFCK 949
            LQIF+ S APAA+VMLY+S  +GNK+CAE  IR F++S  S LPK++H QCAPI+LEFCK
Sbjct: 241  LQIFMLSSAPAALVMLYVSNIKGNKECAESSIRHFLSSCRSSLPKSLHTQCAPIVLEFCK 300

Query: 950  LLRRASQDDAMYKLCRGSLGSMVEYIGIGRG 1042
            LLR  + +D +Y  CR SLGS++E +G+ RG
Sbjct: 301  LLRNVAYNDPLYLCCRSSLGSLLESMGVSRG 331


>emb|CBI33105.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score =  311 bits (796), Expect = 2e-82
 Identities = 159/283 (56%), Positives = 209/283 (73%), Gaps = 1/283 (0%)
 Frame = +2

Query: 248  MRKDEPNAVNSSVTPQDTHRSQFQPRVXXXXXXXXXXXXXXXLPKLQFFVRMISEGNTLV 427
            MRK + NA  S  +P D+H  + +                    +LQFFVRMISEGNTLV
Sbjct: 1    MRKFDQNAFVSCNSPPDSHLERHRVVDARSCPSSCSAESARPDSRLQFFVRMISEGNTLV 60

Query: 428  LQANSHDTVKSIHERIQSITGIPVIEQRLIYRGKQLQWEQSLAACSIQNDAGLQLVGRMR 607
            + ANS DTV+S+H RIQSITGIPV+EQRLIYRGKQLQWEQSLA CSIQNDAGLQLVGRMR
Sbjct: 61   IHANSDDTVESLHHRIQSITGIPVMEQRLIYRGKQLQWEQSLAECSIQNDAGLQLVGRMR 120

Query: 608  STEHPQAWQLIDQMVSSICRMCKGEPVSSGKSVKSRLVEFLTTTPQKDTEQAAGHLQIFI 787
            STEHP AW++  +MVS+ICR+C+GE     K++KS+L+EFL  TP+ DTE AAG+LQ+F+
Sbjct: 121  STEHPAAWRVASEMVSTICRLCRGETFRPLKNIKSQLLEFLMLTPKDDTESAAGYLQVFM 180

Query: 788  SSCAPAAMVMLYLSPDEGNKKCAEDLIRQFI-TSISMLPKTIHPQCAPILLEFCKLLRRA 964
            SS AP+A+VMLY+SP + NK+ A+D IRQF+ +S ++LPK++  QC PI+LEFCKLL R 
Sbjct: 181  SSSAPSALVMLYMSPTKSNKETADDTIRQFLNSSRNLLPKSVQIQCVPIVLEFCKLLSRT 240

Query: 965  SQDDAMYKLCRGSLGSMVEYIGIGRGTTTKNGDSNKTVIAFQD 1093
              +D +Y  CR +LGS+VE +G+ R   ++   ++KT+I  ++
Sbjct: 241  DHEDPLYLTCRSTLGSLVENVGVVR--ASRYCHNSKTLIVVKE 281


>ref|XP_003529662.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
          Length = 867

 Score =  295 bits (755), Expect = 1e-77
 Identities = 164/326 (50%), Positives = 208/326 (63%), Gaps = 2/326 (0%)
 Frame = +2

Query: 122  DTPSMSLVDSSIDCVHQRIKRKLDDYGPTDDEDFSSELVSVRMRKDEPNAVNSSVTPQDT 301
            DTP++              KRK DD    DDEDFS +LV VRMRKDE  AVNS      +
Sbjct: 5    DTPAVHHRSGGATDHRHPSKRKFDD---EDDEDFS-DLVCVRMRKDEAKAVNSWSASSSS 60

Query: 302  HRSQFQPRVXXXXXXXXXXXXXXXLPKLQFFVRMISEGNTLVLQANSHDTVKSIHERIQS 481
              S                        +QFFVRM+S GNT+V+QA   DTVKSIHERIQS
Sbjct: 61   SSSD---------AGGCSSLQQQQRSHIQFFVRMMSAGNTIVMQAFPEDTVKSIHERIQS 111

Query: 482  ITGIPVIEQRLIYRGKQLQWEQSLAACSIQNDAGLQLVGRMRSTEHPQAWQLIDQMVSSI 661
            + GIP+ EQRLIYRGKQLQWEQ+LA C IQNDA LQLVGRMRSTEHPQAWQ+I+ MVS +
Sbjct: 112  MKGIPLFEQRLIYRGKQLQWEQTLAECFIQNDANLQLVGRMRSTEHPQAWQVINDMVSLV 171

Query: 662  CRMCKGEPVSSG-KSVKSRLVEFLTTTPQKDTEQAAGHLQIFISSCAPAAMVMLYLSPDE 838
             R+C+GE V    K+VK  +  +L  TP+ D + A+G+ QIF+SS APA +VMLY+SP  
Sbjct: 172  YRLCRGETVHDALKTVKGLMTSYLNMTPRIDNDSASGYFQIFMSSSAPAVLVMLYVSPYA 231

Query: 839  GNKKCAEDLIRQFITSI-SMLPKTIHPQCAPILLEFCKLLRRASQDDAMYKLCRGSLGSM 1015
            GNK CA+  +R F++S  ++L K +H QCA ++LEFCKLLRR    D +Y  CR + GS+
Sbjct: 232  GNKDCADSSVRHFLSSCRNILSKALHGQCARVVLEFCKLLRRVGSHDPLYLFCRSTFGSL 291

Query: 1016 VEYIGIGRGTTTKNGDSNKTVIAFQD 1093
            +E  G+  G+     D+ K ++  QD
Sbjct: 292  LETAGVSYGS---GSDNVKGLVLIQD 314


>ref|XP_003549564.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
          Length = 867

 Score =  286 bits (731), Expect = 8e-75
 Identities = 160/308 (51%), Positives = 203/308 (65%), Gaps = 3/308 (0%)
 Frame = +2

Query: 179  KRKLDDYGPTDDEDFSSELVSVRMRKDEPNAVNS-SVTPQDTHRSQFQPRVXXXXXXXXX 355
            KRK DD    DDEDFS +LV VRMRKDE  AVNS S +  D        R          
Sbjct: 24   KRKFDD---EDDEDFS-DLVCVRMRKDEAKAVNSWSASSSDAGGCSALQRQQRSH----- 74

Query: 356  XXXXXXLPKLQFFVRMISEGNTLVLQANSHDTVKSIHERIQSITGIPVIEQRLIYRGKQL 535
                     +QFFVRM+  GNT+V+QA   D+VKSIHERIQS+ GIP+ EQRLIYRGKQL
Sbjct: 75   ---------IQFFVRMMCGGNTIVMQAFPEDSVKSIHERIQSMKGIPLFEQRLIYRGKQL 125

Query: 536  QWEQSLAACSIQNDAGLQLVGRMRSTEHPQAWQLIDQMVSSICRMCKGEPV-SSGKSVKS 712
            QWEQ+LA CSIQNDA LQLVGRMRSTEHPQAWQ+I+ MVS + R+C GE V  S K++K 
Sbjct: 126  QWEQTLAECSIQNDANLQLVGRMRSTEHPQAWQVINDMVSLVYRLCCGETVHDSLKTIKG 185

Query: 713  RLVEFLTTTPQKDTEQAAGHLQIFISSCAPAAMVMLYLSPDEGNKKCAEDLIRQFITSI- 889
             +  +L  TP+ D + A+G+ QIF+SS APA +VMLY+SP  GNK CA+  +R F++S  
Sbjct: 186  LITSYLNMTPRIDNDSASGYFQIFMSSSAPAVLVMLYVSPYAGNKDCADSSVRHFLSSCR 245

Query: 890  SMLPKTIHPQCAPILLEFCKLLRRASQDDAMYKLCRGSLGSMVEYIGIGRGTTTKNGDSN 1069
            + L K +H QCA ++LEFCKLLRR    D +Y  CR + GS++E  G+    +     + 
Sbjct: 246  TTLSKALHGQCARVVLEFCKLLRRVGCQDPLYLYCRSAFGSLLETAGVSYAASASG--NV 303

Query: 1070 KTVIAFQD 1093
            K +++ QD
Sbjct: 304  KGLVSIQD 311


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