BLASTX nr result

ID: Panax21_contig00008390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008390
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279552.1| PREDICTED: nuclear pore complex protein Nup5...   291   8e-77
emb|CBI27624.3| unnamed protein product [Vitis vinifera]              291   8e-77
ref|XP_002514932.1| conserved hypothetical protein [Ricinus comm...   289   5e-76
ref|XP_002314540.1| predicted protein [Populus trichocarpa] gi|2...   266   3e-69
ref|XP_002311716.1| predicted protein [Populus trichocarpa] gi|2...   265   6e-69

>ref|XP_002279552.1| PREDICTED: nuclear pore complex protein Nup54-like [Vitis vinifera]
          Length = 371

 Score =  291 bits (746), Expect = 8e-77
 Identities = 152/172 (88%), Positives = 166/172 (96%), Gaps = 2/172 (1%)
 Frame = -1

Query: 772 KLQDEVILSDAERLRITQSNVKVLQRHFQADTIPRIERMRQKEQGLQRRLLRVMRIVEAL 593
           KLQDEVILSDAERLR+TQSNVK+LQRHFQADT+P I+RMRQKEQGLQRRLLRVMRIVEAL
Sbjct: 198 KLQDEVILSDAERLRMTQSNVKLLQRHFQADTLPWIQRMRQKEQGLQRRLLRVMRIVEAL 257

Query: 592 EGKGFRLPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLTLSRVQANSL--GGSVFL 419
           EGKG+RLPLMKGEVEL EKLAAITRQLKGSGAELSRRVQNLLT+SRVQAN++  GGSV+L
Sbjct: 258 EGKGYRLPLMKGEVELVEKLAAITRQLKGSGAELSRRVQNLLTISRVQANAIGGGGSVYL 317

Query: 418 PGSTKIHEQSLTDMQEVLQQQTEAISRLGNVLKRDIRDMEIIMAEETQMTED 263
           PGSTKIHEQSL DMQEVLQQQTEAI+RLGNVLKRD RDMEIIM+E+T+MT+D
Sbjct: 318 PGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDSRDMEIIMSEDTEMTQD 369


>emb|CBI27624.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  291 bits (746), Expect = 8e-77
 Identities = 152/172 (88%), Positives = 166/172 (96%), Gaps = 2/172 (1%)
 Frame = -1

Query: 772 KLQDEVILSDAERLRITQSNVKVLQRHFQADTIPRIERMRQKEQGLQRRLLRVMRIVEAL 593
           KLQDEVILSDAERLR+TQSNVK+LQRHFQADT+P I+RMRQKEQGLQRRLLRVMRIVEAL
Sbjct: 92  KLQDEVILSDAERLRMTQSNVKLLQRHFQADTLPWIQRMRQKEQGLQRRLLRVMRIVEAL 151

Query: 592 EGKGFRLPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLTLSRVQANSL--GGSVFL 419
           EGKG+RLPLMKGEVEL EKLAAITRQLKGSGAELSRRVQNLLT+SRVQAN++  GGSV+L
Sbjct: 152 EGKGYRLPLMKGEVELVEKLAAITRQLKGSGAELSRRVQNLLTISRVQANAIGGGGSVYL 211

Query: 418 PGSTKIHEQSLTDMQEVLQQQTEAISRLGNVLKRDIRDMEIIMAEETQMTED 263
           PGSTKIHEQSL DMQEVLQQQTEAI+RLGNVLKRD RDMEIIM+E+T+MT+D
Sbjct: 212 PGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDSRDMEIIMSEDTEMTQD 263


>ref|XP_002514932.1| conserved hypothetical protein [Ricinus communis]
           gi|223545983|gb|EEF47486.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  289 bits (739), Expect = 5e-76
 Identities = 147/172 (85%), Positives = 167/172 (97%), Gaps = 2/172 (1%)
 Frame = -1

Query: 772 KLQDEVILSDAERLRITQSNVKVLQRHFQADTIPRIERMRQKEQGLQRRLLRVMRIVEAL 593
           KLQDEVI+SDAERLR+TQSNVK+LQRHFQA+T+PRIERMRQKEQ LQRRLLR+MRI+EAL
Sbjct: 222 KLQDEVIVSDAERLRMTQSNVKMLQRHFQAETLPRIERMRQKEQSLQRRLLRIMRIMEAL 281

Query: 592 EGKGFRLPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLTLSRVQANSL--GGSVFL 419
           EGKG+R+PLMKGE ELAEKLAAITRQLKGSGAELSRRVQNLLT+SR+QAN+L  GGS++L
Sbjct: 282 EGKGYRMPLMKGETELAEKLAAITRQLKGSGAELSRRVQNLLTVSRIQANALGAGGSIYL 341

Query: 418 PGSTKIHEQSLTDMQEVLQQQTEAISRLGNVLKRDIRDMEIIMAEETQMTED 263
           PGSTKIHEQSL DMQEVLQQQTEAI+RLGNVLKRD+RDMEIIMAE+T+M++D
Sbjct: 342 PGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDMRDMEIIMAEDTEMSQD 393


>ref|XP_002314540.1| predicted protein [Populus trichocarpa] gi|222863580|gb|EEF00711.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  266 bits (681), Expect = 3e-69
 Identities = 140/167 (83%), Positives = 154/167 (92%), Gaps = 2/167 (1%)
 Frame = -1

Query: 772 KLQDEVILSDAERLRITQSNVKVLQRHFQADTIPRIERMRQKEQGLQRRLLRVMRIVEAL 593
           KLQDEVI+SDAERLR+TQSNVK+LQRHFQA+T+P IERMRQKEQ LQRRLLRVMRI+EAL
Sbjct: 104 KLQDEVIVSDAERLRMTQSNVKMLQRHFQAETLPWIERMRQKEQSLQRRLLRVMRIMEAL 163

Query: 592 EGKGFRLPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLTLSRVQANSL--GGSVFL 419
           EGKG RLPL KGE ELAEKL AI RQLKGSGAE SRRV NLLT+SRVQAN +  GGS++L
Sbjct: 164 EGKGCRLPLTKGEAELAEKLVAIIRQLKGSGAEFSRRVHNLLTVSRVQANGIGAGGSLYL 223

Query: 418 PGSTKIHEQSLTDMQEVLQQQTEAISRLGNVLKRDIRDMEIIMAEET 278
           PGSTKIHE+SL DMQEVLQQQTEAI+RLGNVLKRDIRDMEI+MAE+T
Sbjct: 224 PGSTKIHEESLADMQEVLQQQTEAIARLGNVLKRDIRDMEIMMAEDT 270


>ref|XP_002311716.1| predicted protein [Populus trichocarpa] gi|222851536|gb|EEE89083.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  265 bits (678), Expect = 6e-69
 Identities = 143/172 (83%), Positives = 155/172 (90%), Gaps = 3/172 (1%)
 Frame = -1

Query: 772 KLQDEVILSDAERLRITQSNVK-VLQRHFQADTIPRIERMRQKEQGLQRRLLRVMRIVEA 596
           KLQDEVI+SDAERLR+TQSN+   LQRHFQA  +PRIERMRQKEQ LQR LLRVMRI+EA
Sbjct: 199 KLQDEVIVSDAERLRMTQSNINGTLQRHFQAVALPRIERMRQKEQCLQRHLLRVMRIMEA 258

Query: 595 LEGKGFRLPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLTLSRVQANSL--GGSVF 422
           LEGKGFRLPL K E ELAEKLAAI RQLKGSGAELSRRVQNLLT+SRVQ N +  GGS++
Sbjct: 259 LEGKGFRLPLTKAEAELAEKLAAIIRQLKGSGAELSRRVQNLLTVSRVQENGIGAGGSLY 318

Query: 421 LPGSTKIHEQSLTDMQEVLQQQTEAISRLGNVLKRDIRDMEIIMAEETQMTE 266
           LPGSTKIHEQSL DMQEVLQQQTEAI+RLGNVLKRDIRDMEI+MAE T+MTE
Sbjct: 319 LPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDMEIMMAEGTEMTE 370


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