BLASTX nr result

ID: Panax21_contig00008383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008383
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234753.1| CycD3;2 protein [Solanum lycopersicum] gi|64...   218   5e-55
dbj|BAH15074.1| cyclin D3 [Ipomoea batatas]                           216   1e-54
dbj|BAE93057.1| cyclin [Nicotiana tabacum]                            216   2e-54
dbj|BAE93058.1| cyclin [Nicotiana tabacum]                            215   3e-54
emb|CAA09853.1| cyclin D3.1 protein [Nicotiana tabacum]               215   3e-54

>ref|NP_001234753.1| CycD3;2 protein [Solanum lycopersicum] gi|6434199|emb|CAB60837.1|
           CycD3;2 [Solanum lycopersicum]
          Length = 364

 Score =  218 bits (554), Expect = 5e-55
 Identities = 103/136 (75%), Positives = 121/136 (88%)
 Frame = +1

Query: 1   TQVPLLLDLQVEETQYVFEAKTIQRMEILVLSTLKWKMNPVTPLSFLDHIIRRLGLKSDL 180
           TQVPLLLD QVE+ +YVFEAKTIQRME+LVLS+LKW+MNPVTPLSFLDHIIRRLGLK+++
Sbjct: 160 TQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLDHIIRRLGLKNNV 219

Query: 181 HWEFFKKCEALLLSVVADSRSIRHLPSVLATATMLHVIHQVEPFNAIQYQNQLLGVLKTN 360
           HWEF ++CE+LLLSV+ D R +R++PSVLATA MLHVIHQ+EP NAI YQNQLLGVLK +
Sbjct: 220 HWEFLRRCESLLLSVMIDCRFVRYMPSVLATAIMLHVIHQIEPCNAIDYQNQLLGVLKIS 279

Query: 361 KEETNECYELIGNISS 408
           KE  N CYELI  +SS
Sbjct: 280 KENVNNCYELISEVSS 295


>dbj|BAH15074.1| cyclin D3 [Ipomoea batatas]
          Length = 361

 Score =  216 bits (551), Expect = 1e-54
 Identities = 103/137 (75%), Positives = 121/137 (88%)
 Frame = +1

Query: 1   TQVPLLLDLQVEETQYVFEAKTIQRMEILVLSTLKWKMNPVTPLSFLDHIIRRLGLKSDL 180
           T VPLLLD QVE+ ++VF+AKTIQ+ME+LVLSTLKW+MNPVTPLSFLDHI RRLGLK+ L
Sbjct: 145 THVPLLLDFQVEDAEFVFDAKTIQKMELLVLSTLKWRMNPVTPLSFLDHITRRLGLKNHL 204

Query: 181 HWEFFKKCEALLLSVVADSRSIRHLPSVLATATMLHVIHQVEPFNAIQYQNQLLGVLKTN 360
           HWEFF KCE+L+LS + DSR +R LPSVLATATMLHVIHQ+EP NA+ YQNQLLGVLK +
Sbjct: 205 HWEFFTKCESLILSFMPDSRFVRFLPSVLATATMLHVIHQLEPSNAVDYQNQLLGVLKIS 264

Query: 361 KEETNECYELIGNISST 411
           KE+ N+CYELI  +SST
Sbjct: 265 KEKVNDCYELIKELSST 281


>dbj|BAE93057.1| cyclin [Nicotiana tabacum]
          Length = 369

 Score =  216 bits (549), Expect = 2e-54
 Identities = 100/136 (73%), Positives = 123/136 (90%)
 Frame = +1

Query: 1   TQVPLLLDLQVEETQYVFEAKTIQRMEILVLSTLKWKMNPVTPLSFLDHIIRRLGLKSDL 180
           TQVPLLLD QVE+ +YVFEAKTIQRME+LVLS+LKW+MNPVTPLSFLDHIIRRLGLK+++
Sbjct: 161 TQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLDHIIRRLGLKNNV 220

Query: 181 HWEFFKKCEALLLSVVADSRSIRHLPSVLATATMLHVIHQVEPFNAIQYQNQLLGVLKTN 360
           HWEF ++CE+LLLS++AD R +R++PSVLATA MLHVIHQVEP N+++YQNQLLGVLK +
Sbjct: 221 HWEFLRRCESLLLSIMADCRFVRYMPSVLATAIMLHVIHQVEPCNSVEYQNQLLGVLKIS 280

Query: 361 KEETNECYELIGNISS 408
           KE+ N C+ELI  + S
Sbjct: 281 KEKVNNCFELISEVCS 296


>dbj|BAE93058.1| cyclin [Nicotiana tabacum]
          Length = 373

 Score =  215 bits (547), Expect = 3e-54
 Identities = 100/136 (73%), Positives = 121/136 (88%)
 Frame = +1

Query: 1   TQVPLLLDLQVEETQYVFEAKTIQRMEILVLSTLKWKMNPVTPLSFLDHIIRRLGLKSDL 180
           TQVPLLLD QVE+ +YVFEAKTIQRME+LVLS+LKW+MNPVTPLSFLDHIIRRLGL++++
Sbjct: 165 TQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLDHIIRRLGLRNNI 224

Query: 181 HWEFFKKCEALLLSVVADSRSIRHLPSVLATATMLHVIHQVEPFNAIQYQNQLLGVLKTN 360
           HWEF ++CE LLLS++AD R +R++PSVLATA MLHVIHQVEP N++ YQNQLLGVLK N
Sbjct: 225 HWEFLRRCENLLLSIMADCRFVRYMPSVLATAIMLHVIHQVEPCNSVDYQNQLLGVLKIN 284

Query: 361 KEETNECYELIGNISS 408
           KE+ N C+ELI  + S
Sbjct: 285 KEKVNNCFELISEVCS 300


>emb|CAA09853.1| cyclin D3.1 protein [Nicotiana tabacum]
          Length = 373

 Score =  215 bits (547), Expect = 3e-54
 Identities = 100/136 (73%), Positives = 121/136 (88%)
 Frame = +1

Query: 1   TQVPLLLDLQVEETQYVFEAKTIQRMEILVLSTLKWKMNPVTPLSFLDHIIRRLGLKSDL 180
           TQVPLLLD QVE+ +YVFEAKTIQRME+LVLS+LKW+MNPVTPLSFLDHIIRRLGL++++
Sbjct: 165 TQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLDHIIRRLGLRNNI 224

Query: 181 HWEFFKKCEALLLSVVADSRSIRHLPSVLATATMLHVIHQVEPFNAIQYQNQLLGVLKTN 360
           HWEF ++CE LLLS++AD R +R++PSVLATA MLHVIHQVEP N++ YQNQLLGVLK N
Sbjct: 225 HWEFLRRCENLLLSIMADCRFVRYMPSVLATAIMLHVIHQVEPCNSVDYQNQLLGVLKIN 284

Query: 361 KEETNECYELIGNISS 408
           KE+ N C+ELI  + S
Sbjct: 285 KEKVNNCFELISEVCS 300


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