BLASTX nr result
ID: Panax21_contig00008378
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00008378 (487 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631761.1| PREDICTED: transcription initiation factor T... 86 2e-15 ref|XP_004145505.1| PREDICTED: transcription initiation factor T... 84 9e-15 emb|CAN63613.1| hypothetical protein VITISV_005881 [Vitis vinifera] 83 2e-14 ref|XP_002515435.1| protein with unknown function [Ricinus commu... 81 1e-13 ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 >ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3| unnamed protein product [Vitis vinifera] Length = 676 Score = 86.3 bits (212), Expect = 2e-15 Identities = 44/53 (83%), Positives = 50/53 (94%) Frame = +3 Query: 3 STRVPKTEENKSGTTTNRLRSLKTLPTKSTPVYALRFSRRNLLFAAGALSTNG 161 ST+VP++EENKSG T+ RLRSLKTLPTKSTPVY+LRFSRRNLLFAAGALS +G Sbjct: 625 STKVPRSEENKSGNTS-RLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKSG 676 >ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like [Cucumis sativus] gi|449485181|ref|XP_004157092.1| PREDICTED: transcription initiation factor TFIID subunit 5-like [Cucumis sativus] Length = 674 Score = 84.3 bits (207), Expect = 9e-15 Identities = 43/52 (82%), Positives = 48/52 (92%) Frame = +3 Query: 3 STRVPKTEENKSGTTTNRLRSLKTLPTKSTPVYALRFSRRNLLFAAGALSTN 158 ST+ P+T+ENK+GT NRLRSLKTLPTKSTPVY+LRFSRRNLLFAAGALS N Sbjct: 620 STKPPRTDENKTGTP-NRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKN 670 >emb|CAN63613.1| hypothetical protein VITISV_005881 [Vitis vinifera] Length = 118 Score = 83.2 bits (204), Expect = 2e-14 Identities = 43/53 (81%), Positives = 49/53 (92%) Frame = +3 Query: 3 STRVPKTEENKSGTTTNRLRSLKTLPTKSTPVYALRFSRRNLLFAAGALSTNG 161 ST+VP++EENKSG T+ RLRSLKTL TKSTPVY+LRFSRRNLLFAAGALS +G Sbjct: 67 STKVPRSEENKSGNTS-RLRSLKTLXTKSTPVYSLRFSRRNLLFAAGALSKSG 118 >ref|XP_002515435.1| protein with unknown function [Ricinus communis] gi|223545379|gb|EEF46884.1| protein with unknown function [Ricinus communis] Length = 670 Score = 80.9 bits (198), Expect = 1e-13 Identities = 42/53 (79%), Positives = 47/53 (88%) Frame = +3 Query: 3 STRVPKTEENKSGTTTNRLRSLKTLPTKSTPVYALRFSRRNLLFAAGALSTNG 161 ST+V K EE+KSG+ NRLRSLKTLPTKSTPVY+LRFSRRNLLFAAG LS +G Sbjct: 619 STKVTKAEESKSGSA-NRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGVLSKSG 670 >ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|222866341|gb|EEF03472.1| predicted protein [Populus trichocarpa] Length = 675 Score = 80.1 bits (196), Expect = 2e-13 Identities = 41/50 (82%), Positives = 45/50 (90%) Frame = +3 Query: 3 STRVPKTEENKSGTTTNRLRSLKTLPTKSTPVYALRFSRRNLLFAAGALS 152 ST+ P+TEE+KSG T NRLR LKTLPTKSTPVY LRFSRRNLLFAAGAL+ Sbjct: 624 STKAPRTEESKSGNT-NRLRLLKTLPTKSTPVYTLRFSRRNLLFAAGALA 672