BLASTX nr result

ID: Panax21_contig00008374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008374
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278416.2| PREDICTED: transcription elongation factor S...   257   2e-66
emb|CBI32841.3| unnamed protein product [Vitis vinifera]              255   8e-66
ref|XP_003553378.1| PREDICTED: transcription elongation factor S...   209   9e-52
ref|XP_003521098.1| PREDICTED: transcription elongation factor S...   209   9e-52
ref|XP_004171804.1| PREDICTED: transcription elongation factor S...   208   1e-51

>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
           vinifera]
          Length = 1660

 Score =  257 bits (657), Expect = 2e-66
 Identities = 148/252 (58%), Positives = 159/252 (63%)
 Frame = -3

Query: 756 GQDEYEKDGFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYVLDEDDYELL 577
           GQDEYEKDGFI                                     N+VLDEDDYELL
Sbjct: 43  GQDEYEKDGFIVDDVDEEEQDEEEERADSDEERQKKKKRKKRESEK--NFVLDEDDYELL 100

Query: 576 QDNNITGFHRPKESKKFKRLKKAQRDVEDEHSGFSDDDEFDRSGKGGRTAEEKLKRSLFG 397
           +DNNITGFHRPK SK+FKRLKKAQRD   E SGFSD++EFD SGK GRTAEEKLKRSLFG
Sbjct: 101 EDNNITGFHRPKMSKRFKRLKKAQRDTRGEGSGFSDEEEFDGSGKSGRTAEEKLKRSLFG 160

Query: 396 DDEGPQLXXXXXXXXXXXXXXXXXXXXXXXXDFIVEEEEVDEHGAPXXXXXXXXXXXRQA 217
           DDE P                          DFIVEEEEVDEHGAP           RQA
Sbjct: 161 DDEAP---IDDIAEEEQFEEDGDIGEDDEMADFIVEEEEVDEHGAPVRRRKPNKKKSRQA 217

Query: 216 PGVSSSALQEAHDIFGDVEEFLKLRKQGLAKVRYNDESGEWKERRLEDEFEPSILSEKYM 37
           PGVSSSALQEAH+IFGDV+E L+LRKQGL       +SGEW+ERRLEDEFEP ILSEKYM
Sbjct: 218 PGVSSSALQEAHEIFGDVDELLQLRKQGL-------DSGEWRERRLEDEFEPIILSEKYM 270

Query: 36  TEKDDMVRETDI 1
           TEKDD +RE DI
Sbjct: 271 TEKDDRMREIDI 282


>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
          Length = 1646

 Score =  255 bits (652), Expect = 8e-66
 Identities = 149/253 (58%), Positives = 160/253 (63%), Gaps = 1/253 (0%)
 Frame = -3

Query: 756 GQDEYEKDGFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYVLDEDDYELL 577
           GQDEYEKDGFI                                     N+VLDEDDYELL
Sbjct: 43  GQDEYEKDGFIVDDVDEEEQDEEEERADSDEERQKKKKRKKRESEK--NFVLDEDDYELL 100

Query: 576 QDNNITGFHRPK-ESKKFKRLKKAQRDVEDEHSGFSDDDEFDRSGKGGRTAEEKLKRSLF 400
           +DNNITGFHRPK ESK+FKRLKKAQRD   E SGFSD++EFD SGK GRTAEEKLKRSLF
Sbjct: 101 EDNNITGFHRPKMESKRFKRLKKAQRDTRGEGSGFSDEEEFDGSGKSGRTAEEKLKRSLF 160

Query: 399 GDDEGPQLXXXXXXXXXXXXXXXXXXXXXXXXDFIVEEEEVDEHGAPXXXXXXXXXXXRQ 220
           GDDE P                          DFIVEEEEVDEHGAP           RQ
Sbjct: 161 GDDEAP---IDDIAEEEQFEEDGDIGEDDEMADFIVEEEEVDEHGAPVRRRKPNKKKSRQ 217

Query: 219 APGVSSSALQEAHDIFGDVEEFLKLRKQGLAKVRYNDESGEWKERRLEDEFEPSILSEKY 40
           APGVSSSALQEAH+IFGDV+E L+LRKQGL       +SGEW+ERRLEDEFEP ILSEKY
Sbjct: 218 APGVSSSALQEAHEIFGDVDELLQLRKQGL-------DSGEWRERRLEDEFEPIILSEKY 270

Query: 39  MTEKDDMVRETDI 1
           MTEKDD +RE DI
Sbjct: 271 MTEKDDRMREIDI 283


>ref|XP_003553378.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1617

 Score =  209 bits (531), Expect = 9e-52
 Identities = 129/253 (50%), Positives = 146/253 (57%), Gaps = 1/253 (0%)
 Frame = -3

Query: 756 GQDEYEKDGFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYVLDEDDYELL 577
           GQDEYE DGFI                                      YVLDEDDYELL
Sbjct: 13  GQDEYENDGFIVDDIEDEEEEDEEEERAESDDERQKKKKRKKKE----EYVLDEDDYELL 68

Query: 576 QDNNITGFHRPKESKKFKRLKKAQRDVEDEHSGFSDDDEFDRSGKGGRTAEEKLKRSLFG 397
           +DNNI   HR KESKKFKRLKK +RD E+E SG SD++EF  SGK GRTAEEKLKRSLFG
Sbjct: 69  EDNNIN-IHRRKESKKFKRLKKGRRDTEEEPSGLSDEEEFVGSGKVGRTAEEKLKRSLFG 127

Query: 396 DDEG-PQLXXXXXXXXXXXXXXXXXXXXXXXXDFIVEEEEVDEHGAPXXXXXXXXXXXRQ 220
           DDEG P                          DFIV+EEEVDE+GAP           RQ
Sbjct: 128 DDEGAPLEDIAEEEEQGEEEEDADIGEDDEMADFIVDEEEVDENGAPMRQKKLKRKKTRQ 187

Query: 219 APGVSSSALQEAHDIFGDVEEFLKLRKQGLAKVRYNDESGEWKERRLEDEFEPSILSEKY 40
           APGVSSSALQEA ++FGD +E +  R++ L       E  E++E RLEDEFEP +LSEKY
Sbjct: 188 APGVSSSALQEAQELFGDPDELILNRQKNL-------EMSEFRETRLEDEFEPIVLSEKY 240

Query: 39  MTEKDDMVRETDI 1
           MTEKDD +RE DI
Sbjct: 241 MTEKDDRIRELDI 253


>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1663

 Score =  209 bits (531), Expect = 9e-52
 Identities = 128/253 (50%), Positives = 146/253 (57%), Gaps = 1/253 (0%)
 Frame = -3

Query: 756 GQDEYEKDGFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYVLDEDDYELL 577
           GQDEYE DGFI                                      YVLDEDDYELL
Sbjct: 44  GQDEYENDGFIVDDIEDEEEQDEEEERAESDEERPKKKKRKKKE----EYVLDEDDYELL 99

Query: 576 QDNNITGFHRPKESKKFKRLKKAQRDVEDEHSGFSDDDEFDRSGKGGRTAEEKLKRSLFG 397
           +DNNI   HR KESKKFKRLKK +RD+E+E SG SD++E   SGK GRTAEEKLKRSLFG
Sbjct: 100 EDNNIN-IHRRKESKKFKRLKKGRRDIEEEPSGLSDEEELVGSGKAGRTAEEKLKRSLFG 158

Query: 396 DDEG-PQLXXXXXXXXXXXXXXXXXXXXXXXXDFIVEEEEVDEHGAPXXXXXXXXXXXRQ 220
           DDEG P                          DFIV+EEEVDE+GAP           RQ
Sbjct: 159 DDEGAPLEDIAEEEEQGEEEEDADIGEDDEMADFIVDEEEVDENGAPMRQRKLKKKKTRQ 218

Query: 219 APGVSSSALQEAHDIFGDVEEFLKLRKQGLAKVRYNDESGEWKERRLEDEFEPSILSEKY 40
           APGVSSSALQEA ++FGD +E +  R++ L       E  E++E RLEDEFEP +LSEKY
Sbjct: 219 APGVSSSALQEAQELFGDPDELILNRQKNL-------EMSEFRETRLEDEFEPIVLSEKY 271

Query: 39  MTEKDDMVRETDI 1
           MTEKDD +RE DI
Sbjct: 272 MTEKDDWIRELDI 284


>ref|XP_004171804.1| PREDICTED: transcription elongation factor SPT6-like, partial
           [Cucumis sativus]
          Length = 1322

 Score =  208 bits (530), Expect = 1e-51
 Identities = 130/253 (51%), Positives = 150/253 (59%), Gaps = 1/253 (0%)
 Frame = -3

Query: 756 GQDEYEKDGFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYVLDEDDYELL 577
           G+DEYEKDGFI                                      YVLDEDDYELL
Sbjct: 34  GEDEYEKDGFIVDDVEEEDEEDVEEREDSDDERQKKKKRKKKE-----EYVLDEDDYELL 88

Query: 576 QDNNITGFHRPKE-SKKFKRLKKAQRDVEDEHSGFSDDDEFDRSGKGGRTAEEKLKRSLF 400
           +DNNI+   RPK  SKKFKRLKKA+RD   E SGFSDD++F  S +GGRTAEEKLKRSLF
Sbjct: 89  EDNNIS-IQRPKVGSKKFKRLKKARRD-NLEPSGFSDDEDFVESSRGGRTAEEKLKRSLF 146

Query: 399 GDDEGPQLXXXXXXXXXXXXXXXXXXXXXXXXDFIVEEEEVDEHGAPXXXXXXXXXXXRQ 220
           GDDE P                          DFIV+EEE DE GAP           RQ
Sbjct: 147 GDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEE-DEDGAPIRRKKLKKKKSRQ 205

Query: 219 APGVSSSALQEAHDIFGDVEEFLKLRKQGLAKVRYNDESGEWKERRLEDEFEPSILSEKY 40
           APGVSS+ALQEAH+IFGDV+E L+LRK+ L       ++ EW+E+RLEDEFEP ++SEKY
Sbjct: 206 APGVSSTALQEAHEIFGDVDELLQLRKREL-------DTQEWREKRLEDEFEPIVISEKY 258

Query: 39  MTEKDDMVRETDI 1
           MTEKDD +RE DI
Sbjct: 259 MTEKDDQIREIDI 271


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