BLASTX nr result

ID: Panax21_contig00008373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008373
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   160   1e-37
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   135   3e-30
ref|XP_002320796.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29

>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  160 bits (405), Expect = 1e-37
 Identities = 90/140 (64%), Positives = 96/140 (68%)
 Frame = +2

Query: 35   RNMRCILATMILRLLGSRVVHEDLDQSFNPILSSPLKREVELLTEASSAVSVDLSGESXX 214
            RNMR  LA++ILRLLGSRVVHED D S     S P KRE E L EAS+A S+DLSGES  
Sbjct: 2020 RNMRQSLASVILRLLGSRVVHEDADLSLYSTQSPPSKREAESLMEASTAASLDLSGESLF 2079

Query: 215  XXXXXXXXXXXSSCQPSWLKLKSNSKQTTECIKGFTLFDREVAESLQNDLDPMPLSGTIR 394
                       SSCQPSWLK KS SK TTE IK F+ FDRE AE+LQNDLD M L  TIR
Sbjct: 2080 DRLLLVLHGLLSSCQPSWLKSKSASKSTTESIKEFSGFDREAAENLQNDLDCMQLPDTIR 2139

Query: 395  WRI*IAMPALFPSVRCSISC 454
            WRI  AMP L PS RCSISC
Sbjct: 2140 WRIQAAMPILVPSGRCSISC 2159


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  160 bits (405), Expect = 1e-37
 Identities = 90/140 (64%), Positives = 96/140 (68%)
 Frame = +2

Query: 35   RNMRCILATMILRLLGSRVVHEDLDQSFNPILSSPLKREVELLTEASSAVSVDLSGESXX 214
            RNMR  LA++ILRLLGSRVVHED D S     S P KRE E L EAS+A S+DLSGES  
Sbjct: 1785 RNMRQSLASVILRLLGSRVVHEDADLSLYSTQSPPSKREAESLMEASTAASLDLSGESLF 1844

Query: 215  XXXXXXXXXXXSSCQPSWLKLKSNSKQTTECIKGFTLFDREVAESLQNDLDPMPLSGTIR 394
                       SSCQPSWLK KS SK TTE IK F+ FDRE AE+LQNDLD M L  TIR
Sbjct: 1845 DRLLLVLHGLLSSCQPSWLKSKSASKSTTESIKEFSGFDREAAENLQNDLDCMQLPDTIR 1904

Query: 395  WRI*IAMPALFPSVRCSISC 454
            WRI  AMP L PS RCSISC
Sbjct: 1905 WRIQAAMPILVPSGRCSISC 1924


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
            putative [Ricinus communis]
          Length = 2264

 Score =  135 bits (340), Expect = 3e-30
 Identities = 80/144 (55%), Positives = 90/144 (62%)
 Frame = +2

Query: 23   EPSGRNMRCILATMILRLLGSRVVHEDLDQSFNPILSSPLKREVELLTEASSAVSVDLSG 202
            EPSGRNMR +LA +ILRLLG+RVVHED D SF P+ SS  K EVE   E +S    D  G
Sbjct: 2009 EPSGRNMRHMLACVILRLLGNRVVHEDADLSFYPMKSSQSKVEVESTLEVAST---DSPG 2065

Query: 203  ESXXXXXXXXXXXXXSSCQPSWLKLKSNSKQTTECIKGFTLFDREVAESLQNDLDPMPLS 382
            ES             SS QPSWLK +S SK   E  K  +  DRE+ E+LQNDLD M L 
Sbjct: 2066 ESLFDRLLLVLHGLLSSSQPSWLKSRSASKLMNEFSKDSSGIDRELVETLQNDLDRMQLP 2125

Query: 383  GTIRWRI*IAMPALFPSVRCSISC 454
            G+IRWRI  AMP L PS R SISC
Sbjct: 2126 GSIRWRIQAAMPVLLPSARWSISC 2149


>ref|XP_002320796.1| predicted protein [Populus trichocarpa] gi|222861569|gb|EEE99111.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  135 bits (340), Expect = 3e-30
 Identities = 82/145 (56%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
 Frame = +2

Query: 23  EPSGRNMRCILATMILRLLGSRVVHEDLDQSFNPILSSPLKREVELLTEASSAVSVDLSG 202
           EPSGRNMR +LA++ILRLLGSRVVHED + SF P+ S   KRE+EL  EA+SA   DLSG
Sbjct: 110 EPSGRNMRQMLASVILRLLGSRVVHEDAELSFYPLQSFQSKRELELQLEAASA---DLSG 166

Query: 203 ESXXXXXXXXXXXXXSSCQPSWLKLKS-NSKQTTECIKGFTLFDREVAESLQNDLDPMPL 379
            S             SS  PSWLK +S +S +     K F  FDRE+ ESLQNDLD M L
Sbjct: 167 GSLFDRLLLILHGLLSSSWPSWLKSRSASSSKAVNEFKDFAGFDRELVESLQNDLDRMQL 226

Query: 380 SGTIRWRI*IAMPALFPSVRCSISC 454
            G I+ RI  AMP L PSVRC ISC
Sbjct: 227 PGKIQLRIQSAMPILLPSVRCLISC 251


>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
            predicted protein [Populus trichocarpa]
          Length = 2219

 Score =  134 bits (336), Expect = 1e-29
 Identities = 80/146 (54%), Positives = 94/146 (64%), Gaps = 2/146 (1%)
 Frame = +2

Query: 23   EPSGRNMRCILATMILRLLGSRVVHEDLDQSFNPILSSPLKREVELLTEASSAVSVDLSG 202
            EPSGRNMR +LA++ILRLLGSRVVHED + SF P+ S   K E+E   EA+SA   DLSG
Sbjct: 1957 EPSGRNMRHVLASVILRLLGSRVVHEDAELSFYPLQSFQSKGELESPLEAASA---DLSG 2013

Query: 203  ESXXXXXXXXXXXXXSSCQPSWLKLK--SNSKQTTECIKGFTLFDREVAESLQNDLDPMP 376
            ES             SS +PSWLK +  S+SK   E  K    FDR++ ESLQNDLD M 
Sbjct: 2014 ESLFDRLLLVLHGLLSSSRPSWLKPRPASSSKSVNESSKDCAGFDRDLVESLQNDLDRMK 2073

Query: 377  LSGTIRWRI*IAMPALFPSVRCSISC 454
            L G+ R RI  AMP L PSVRC +SC
Sbjct: 2074 LPGSTRLRIQAAMPILLPSVRCFVSC 2099


Top