BLASTX nr result

ID: Panax21_contig00008372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008372
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524578.1| nucleic acid binding protein, putative [Rici...   234   1e-59
ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|2...   225   7e-57
gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]    224   2e-56
ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788...   223   3e-56
ref|XP_003543576.1| PREDICTED: uncharacterized protein LOC100775...   219   4e-55

>ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536131|gb|EEF37786.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 313

 Score =  234 bits (597), Expect = 1e-59
 Identities = 107/130 (82%), Positives = 120/130 (92%)
 Frame = +2

Query: 80  PYGDQDPNNPFGAPSSPPGFWVSFLRVMQGVVTFFGRIAFLIDQNTQAFHMFMSALLQLF 259
           PYGDQDPNNP+GAPSSPPGFW+SFLRVMQGVV FFGRI+ LIDQNTQAFHMFM+A+LQLF
Sbjct: 185 PYGDQDPNNPYGAPSSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAMLQLF 244

Query: 260 DRSGVLYGELARFVLRLLGIRTKPQKVQPPGPNGFPGAPYNPHGVQNYIEGPKAAPSGAW 439
           DR+G+LYGELARFVLRLLGI+TKP+KVQ PGP+G P AP+NPHG QNYIEGPK APSG W
Sbjct: 245 DRTGLLYGELARFVLRLLGIKTKPRKVQGPGPDGLP-APHNPHGNQNYIEGPKGAPSGGW 303

Query: 440 DGVWGNDASS 469
           D VWG++ SS
Sbjct: 304 DNVWGDNGSS 313


>ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|222861324|gb|EEE98866.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  225 bits (573), Expect = 7e-57
 Identities = 106/130 (81%), Positives = 116/130 (89%)
 Frame = +2

Query: 80  PYGDQDPNNPFGAPSSPPGFWVSFLRVMQGVVTFFGRIAFLIDQNTQAFHMFMSALLQLF 259
           P GDQDPNNPFGAP SPP FWVSFL+VMQGVV  FGRI+FLIDQNTQAFHMFMSALLQLF
Sbjct: 10  PCGDQDPNNPFGAPPSPPSFWVSFLQVMQGVVNVFGRISFLIDQNTQAFHMFMSALLQLF 69

Query: 260 DRSGVLYGELARFVLRLLGIRTKPQKVQPPGPNGFPGAPYNPHGVQNYIEGPKAAPSGAW 439
           DRSG+LYGELARF LRLLGI++KP+KVQ PGP+GFP  P+NP G QNYIEGPKAAPSGAW
Sbjct: 70  DRSGLLYGELARFALRLLGIKSKPRKVQGPGPDGFP-VPHNPRGNQNYIEGPKAAPSGAW 128

Query: 440 DGVWGNDASS 469
           D VWG+  S+
Sbjct: 129 DNVWGDGTSN 138


>gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]
          Length = 299

 Score =  224 bits (570), Expect = 2e-56
 Identities = 102/127 (80%), Positives = 114/127 (89%)
 Frame = +2

Query: 83  YGDQDPNNPFGAPSSPPGFWVSFLRVMQGVVTFFGRIAFLIDQNTQAFHMFMSALLQLFD 262
           +GDQDPNNPFGAPSSPPGFWVSF+ VMQGVVTFFGR+A LIDQNTQAFHM MSA+LQLFD
Sbjct: 173 FGDQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAMLQLFD 232

Query: 263 RSGVLYGELARFVLRLLGIRTKPQKVQPPGPNGFPGAPYNPHGVQNYIEGPKAAPSGAWD 442
           RSG+LYGELARFVLRLLG++TKP KV PPGP   PG P++PHG QN+IEGPKAAPS  WD
Sbjct: 233 RSGMLYGELARFVLRLLGVKTKPNKVHPPGPGALPG-PHHPHGNQNFIEGPKAAPSAGWD 291

Query: 443 GVWGNDA 463
            VWG++A
Sbjct: 292 NVWGDNA 298


>ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788885 [Glycine max]
          Length = 297

 Score =  223 bits (567), Expect = 3e-56
 Identities = 105/132 (79%), Positives = 115/132 (87%), Gaps = 3/132 (2%)
 Frame = +2

Query: 80  PYGDQDPNNPFGAPSSPPGFWVSFLRVMQGVVTFFGRIAFLIDQNTQAFHMFMSALLQLF 259
           PYGDQDPN+PFGAP SPPGFW+S LRVMQGVV FFGRI+ LIDQNTQAFH+FM+ALLQLF
Sbjct: 165 PYGDQDPNDPFGAPPSPPGFWISVLRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLF 224

Query: 260 DRSGVLYGELARFVLRLLGIRTKPQKVQPPGPNGFP---GAPYNPHGVQNYIEGPKAAPS 430
           DRSG+LYGELARFVLRLLGIRTK +KV PPGPNG P     P+NP G  NYIE PKAAPS
Sbjct: 225 DRSGMLYGELARFVLRLLGIRTKSKKVYPPGPNGQPLLGPGPHNPSGNVNYIEAPKAAPS 284

Query: 431 GAWDGVWGNDAS 466
           G+WD VWGNDA+
Sbjct: 285 GSWDNVWGNDAN 296


>ref|XP_003543576.1| PREDICTED: uncharacterized protein LOC100775500 [Glycine max]
          Length = 301

 Score =  219 bits (558), Expect = 4e-55
 Identities = 103/136 (75%), Positives = 115/136 (84%), Gaps = 7/136 (5%)
 Frame = +2

Query: 80  PYGDQDPNNPFGAPSSPPGFWVSFLRVMQGVVTFFGRIAFLIDQNTQAFHMFMSALLQLF 259
           PYG+QDPNNP+GAP SPPGFW+S LRVMQGVV FFGRI+ LIDQNTQAFH+FM+ALLQLF
Sbjct: 165 PYGEQDPNNPYGAPPSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLF 224

Query: 260 DRSGVLYGELARFVLRLLGIRTKPQKVQPPGPNGFP-------GAPYNPHGVQNYIEGPK 418
           DRSG+LYGELARFVLRLLGI+TK +KV PPGPNG P         P+NP G  NYIE PK
Sbjct: 225 DRSGMLYGELARFVLRLLGIKTKSKKVHPPGPNGQPLPGPGPGPGPHNPSGNVNYIEAPK 284

Query: 419 AAPSGAWDGVWGNDAS 466
           AAPSG+WD VWGNDA+
Sbjct: 285 AAPSGSWDNVWGNDAN 300


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