BLASTX nr result

ID: Panax21_contig00008360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008360
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554360.1| PREDICTED: nuclear transcription factor Y su...   241   3e-62
ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y su...   241   3e-62
ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y su...   241   6e-62
ref|XP_002322853.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-61
ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y su...   236   1e-60

>ref|XP_003554360.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           1 [Glycine max]
          Length = 159

 Score =  241 bits (616), Expect = 3e-62
 Identities = 122/142 (85%), Positives = 131/142 (92%), Gaps = 1/142 (0%)
 Frame = +1

Query: 16  MADAPPTSPGGGSHESGDQSPRS-VREQDRFLPIANISRIMKKGLPANGKIAKDAKETVQ 192
           MAD P  SPGGGSHESG+ SPRS VREQDR+LPIANISRIMKK LPANGKIAKDAKETVQ
Sbjct: 1   MADGP-ASPGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQ 59

Query: 193 ECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLARFREMEGD 372
           ECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK+YL R+REMEGD
Sbjct: 60  ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGD 119

Query: 373 SKGSAKGVEGSGRKDGLQPSPN 438
           +KGSAKG + S +KD +QPSPN
Sbjct: 120 TKGSAKGGDSSSKKD-VQPSPN 140


>ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           2 [Glycine max]
          Length = 171

 Score =  241 bits (616), Expect = 3e-62
 Identities = 122/142 (85%), Positives = 131/142 (92%), Gaps = 1/142 (0%)
 Frame = +1

Query: 16  MADAPPTSPGGGSHESGDQSPRS-VREQDRFLPIANISRIMKKGLPANGKIAKDAKETVQ 192
           MAD P  SPGGGSHESG+ SPRS VREQDR+LPIANISRIMKK LPANGKIAKDAKETVQ
Sbjct: 1   MADGP-ASPGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQ 59

Query: 193 ECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLARFREMEGD 372
           ECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK+YL R+REMEGD
Sbjct: 60  ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGD 119

Query: 373 SKGSAKGVEGSGRKDGLQPSPN 438
           +KGSAKG + S +KD +QPSPN
Sbjct: 120 TKGSAKGGDSSSKKD-VQPSPN 140


>ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Glycine
           max]
          Length = 171

 Score =  241 bits (614), Expect = 6e-62
 Identities = 121/142 (85%), Positives = 131/142 (92%), Gaps = 1/142 (0%)
 Frame = +1

Query: 16  MADAPPTSPGGGSHESGDQSPRS-VREQDRFLPIANISRIMKKGLPANGKIAKDAKETVQ 192
           MAD P  SPGGGSHESGD SPRS VREQDR+LPIANISRIMKK LPANGKIAKDAKETVQ
Sbjct: 1   MADGP-ASPGGGSHESGDHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQ 59

Query: 193 ECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLARFREMEGD 372
           ECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDY+DPLK+YL R+REMEGD
Sbjct: 60  ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYMDPLKIYLTRYREMEGD 119

Query: 373 SKGSAKGVEGSGRKDGLQPSPN 438
           +KGSAKG + S ++D +QPSPN
Sbjct: 120 TKGSAKGGDSSAKRD-VQPSPN 140


>ref|XP_002322853.1| predicted protein [Populus trichocarpa] gi|222867483|gb|EEF04614.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  239 bits (611), Expect = 1e-61
 Identities = 121/144 (84%), Positives = 129/144 (89%), Gaps = 3/144 (2%)
 Frame = +1

Query: 16  MADAPPTSPGGGSHESGDQSPRS---VREQDRFLPIANISRIMKKGLPANGKIAKDAKET 186
           MA   P SPGGGSHESGDQSPRS   VREQDRFLPIANISRIMKK LPANGKIAKDAKET
Sbjct: 1   MAAEAPASPGGGSHESGDQSPRSNSNVREQDRFLPIANISRIMKKALPANGKIAKDAKET 60

Query: 187 VQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLARFREME 366
           VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK+YL+R+REME
Sbjct: 61  VQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREME 120

Query: 367 GDSKGSAKGVEGSGRKDGLQPSPN 438
           GD+KGSAK  + S +KD + P PN
Sbjct: 121 GDTKGSAKTGDTSAKKD-IHPGPN 143


>ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Cucumis
           sativus]
          Length = 173

 Score =  236 bits (603), Expect = 1e-60
 Identities = 120/141 (85%), Positives = 129/141 (91%), Gaps = 1/141 (0%)
 Frame = +1

Query: 16  MADAPPTSPGGGSHESGDQSPRS-VREQDRFLPIANISRIMKKGLPANGKIAKDAKETVQ 192
           MADAP  SPGGGSHESG+QSPRS VREQDRFLPIANISRIMKK LPANGKIAKDAKETVQ
Sbjct: 1   MADAP-ASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQ 59

Query: 193 ECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLARFREMEGD 372
           ECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK YL ++RE EGD
Sbjct: 60  ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGD 119

Query: 373 SKGSAKGVEGSGRKDGLQPSP 435
           +KGSAKG +GS +K+   P+P
Sbjct: 120 TKGSAKGGDGSAKKEA-HPTP 139


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