BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008350
         (2203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ...    87   2e-14
ref|XP_002316075.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-10
ref|XP_002519315.1| pentatricopeptide repeat-containing protein,...    73   3e-10
ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata] g...    66   4e-08
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...    65   6e-08

>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510921|gb|AES92063.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 496

 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 38/60 (63%), Positives = 48/60 (80%)
 Frame = -1

Query: 310 RRVHWKEGENPGVSETTIPSRFNKNNKTPIKKKLDQKYKAKSWANTVTEALSDCIDKKQW 131
           ++ HWK+GE PGVSET++PS   +     +KKKLD+K  AK+WANTVTEALS+CIDKKQW
Sbjct: 59  KKKHWKQGEFPGVSETSLPSSTRRKPIKNVKKKLDRKNNAKAWANTVTEALSECIDKKQW 118


>ref|XP_002316075.1| predicted protein [Populus trichocarpa] gi|222865115|gb|EEF02246.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 36/67 (53%), Positives = 46/67 (68%)
 Frame = -1

Query: 331 PILS*FHRRVHWKEGENPGVSETTIPSRFNKNNKTPIKKKLDQKYKAKSWANTVTEALSD 152
           P  S F ++ HWK+GE PG ++ + P R    N   IKKKLD+K KAK+W NTV EAL+D
Sbjct: 4   PPSSTFPKKKHWKQGEFPGFTDASRPRRTAIKN---IKKKLDRKSKAKAWVNTVAEALTD 60

Query: 151 CIDKKQW 131
           C+ KKQW
Sbjct: 61  CVLKKQW 67


>ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541630|gb|EEF43179.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = -1

Query: 310 RRVHWKEGENPGVSETTIPSRFNKNNKTPIKKKLDQKYKAKSWANTVTEALSDCIDKKQW 131
           ++ HWK+GE PG +ET+ P R    N   IKKKLD+K KAK+W NTVTEALSD I KKQW
Sbjct: 54  KKKHWKQGEFPGFTETSPPRRTPIKN---IKKKLDRKNKAKAWVNTVTEALSDRILKKQW 110


>ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
           gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 486

 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 32/56 (57%), Positives = 38/56 (67%)
 Frame = -1

Query: 298 WKEGENPGVSETTIPSRFNKNNKTPIKKKLDQKYKAKSWANTVTEALSDCIDKKQW 131
           WK+GE PG++E   P R    N   +KKKLD++ KA  WANTVTE LSD I KKQW
Sbjct: 52  WKDGEFPGITEPVNPRRTPIKN---VKKKLDRRSKANGWANTVTETLSDLIAKKQW 104


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
           gi|449522692|ref|XP_004168360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
          Length = 496

 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -1

Query: 310 RRVHWKEGENPGVSETTIPSRFNKNNKTPIKKKLDQKYKAKSWANTVTEALSDCIDKKQW 131
           ++ HWK+GE PG +ET+   R        +KKKLD+K  AK+WANTVTEALSD I  K+W
Sbjct: 66  KKRHWKQGEFPGTTETSTRRRAPLKR---VKKKLDRKNNAKAWANTVTEALSDHITNKRW 122