BLASTX nr result

ID: Panax21_contig00008342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008342
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273657.1| PREDICTED: probable 6-phosphogluconolactonas...   125   1e-43
ref|XP_002317815.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-42
ref|XP_002335027.1| predicted protein [Populus trichocarpa] gi|2...   116   7e-42
ref|XP_002321375.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-40
gb|ABK95228.1| unknown [Populus trichocarpa]                          112   6e-40

>ref|XP_002273657.1| PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic
           [Vitis vinifera]
          Length = 318

 Score =  125 bits (313), Expect(2) = 1e-43
 Identities = 56/102 (54%), Positives = 75/102 (73%)
 Frame = -1

Query: 666 NPKKFECRTKTSTAEMATNKGKGEVKLFDSEKDLAVSLAKYIADLSDKFAKERGAFSIVX 487
           NPKKF  RT++S AE+  + GKG+VK+FDSE+++AV LAKY AD+S+K   E+ +F++V 
Sbjct: 50  NPKKFRARTRSSMAEVTADNGKGKVKVFDSEEEVAVGLAKYTADISNKITNEKSSFTVVL 109

Query: 486 XXXXXXXXXXXLVESPYINLVDWSKWHVFWVDERVVPKDHPD 361
                      LVE+PYI+ ++W KWHVFWVDERVVPKDH D
Sbjct: 110 SGGSLIHSLRKLVEAPYIDSIEWGKWHVFWVDERVVPKDHVD 151



 Score = 77.8 bits (190), Expect(2) = 1e-43
 Identities = 38/48 (79%), Positives = 40/48 (83%)
 Frame = -3

Query: 367 PRYHPDSNYLLAYDNFLSKVPILPSNVYAINDALSAEGAADDYETQLR 224
           P+ H DSNY LAYD FLSKVPI P  VYAINDALSAEGAADDYET L+
Sbjct: 146 PKDHVDSNYKLAYDGFLSKVPIPPGQVYAINDALSAEGAADDYETCLK 193


>ref|XP_002317815.1| predicted protein [Populus trichocarpa] gi|222858488|gb|EEE96035.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  117 bits (292), Expect(2) = 2e-42
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = -1

Query: 609 KGKGEVKLFDSEKDLAVSLAKYIADLSDKFAKERGAFSIVXXXXXXXXXXXXLVESPYIN 430
           K K  V++FD+E++LAVSLAKY ADLSDKFAKERG+F++V            LVE+PY++
Sbjct: 12  KNKKVVEVFDTEEELAVSLAKYTADLSDKFAKERGSFTVVVSGGSLIKSLRKLVEAPYVD 71

Query: 429 LVDWSKWHVFWVDERVVPKDHPD 361
            +DWSKWHVFWVDERVVPKDHPD
Sbjct: 72  SIDWSKWHVFWVDERVVPKDHPD 94



 Score = 82.0 bits (201), Expect(2) = 2e-42
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = -3

Query: 367 PRYHPDSNYLLAYDNFLSKVPILPSNVYAINDALSAEGAADDYETQLR 224
           P+ HPDSNY LA+D FLSKVPI P NVYAINDALSAEGAADDYET L+
Sbjct: 89  PKDHPDSNYKLAFDGFLSKVPIPPGNVYAINDALSAEGAADDYETCLK 136


>ref|XP_002335027.1| predicted protein [Populus trichocarpa] gi|222832757|gb|EEE71234.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  116 bits (290), Expect(2) = 7e-42
 Identities = 54/83 (65%), Positives = 65/83 (78%)
 Frame = -1

Query: 609 KGKGEVKLFDSEKDLAVSLAKYIADLSDKFAKERGAFSIVXXXXXXXXXXXXLVESPYIN 430
           K K  V++FD+E +LAVSLAKY ADLSDKFAKERG+F++V            LVE+PY++
Sbjct: 12  KNKKVVEVFDTEDELAVSLAKYTADLSDKFAKERGSFTVVVSGGSLIKSLRKLVEAPYVD 71

Query: 429 LVDWSKWHVFWVDERVVPKDHPD 361
            +DWSKWHVFWVDERVVPKDHPD
Sbjct: 72  SIDWSKWHVFWVDERVVPKDHPD 94



 Score = 80.9 bits (198), Expect(2) = 7e-42
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -3

Query: 367 PRYHPDSNYLLAYDNFLSKVPILPSNVYAINDALSAEGAADDYETQLR 224
           P+ HPDSNY LA+D FLSKVPI P NVYAINDALS+EGAADDYET L+
Sbjct: 89  PKDHPDSNYKLAFDGFLSKVPIPPGNVYAINDALSSEGAADDYETCLK 136


>ref|XP_002321375.1| predicted protein [Populus trichocarpa] gi|222868371|gb|EEF05502.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  112 bits (279), Expect(2) = 1e-40
 Identities = 53/81 (65%), Positives = 63/81 (77%)
 Frame = -1

Query: 603 KGEVKLFDSEKDLAVSLAKYIADLSDKFAKERGAFSIVXXXXXXXXXXXXLVESPYINLV 424
           K  V++FD+E+DLAVSLAKY A LSDKFAKERGAF++V            LVE+PY++ +
Sbjct: 14  KKVVEVFDTEEDLAVSLAKYTAHLSDKFAKERGAFTVVVSGGSLIKSLRKLVEAPYVDSI 73

Query: 423 DWSKWHVFWVDERVVPKDHPD 361
           DWSKW VFWVDERVVPKDHPD
Sbjct: 74  DWSKWQVFWVDERVVPKDHPD 94



 Score = 80.9 bits (198), Expect(2) = 1e-40
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -3

Query: 367 PRYHPDSNYLLAYDNFLSKVPILPSNVYAINDALSAEGAADDYETQLR 224
           P+ HPDSNY LA+D FLSKVPI P NVYAINDALS+EGAADDYET L+
Sbjct: 89  PKDHPDSNYKLAFDGFLSKVPIPPGNVYAINDALSSEGAADDYETCLK 136


>gb|ABK95228.1| unknown [Populus trichocarpa]
          Length = 261

 Score =  112 bits (279), Expect(2) = 6e-40
 Identities = 53/81 (65%), Positives = 63/81 (77%)
 Frame = -1

Query: 603 KGEVKLFDSEKDLAVSLAKYIADLSDKFAKERGAFSIVXXXXXXXXXXXXLVESPYINLV 424
           K  V++FD+E+DLAVSLAKY A LSDKFAKERGAF++V            LVE+PY++ +
Sbjct: 14  KKVVEVFDTEEDLAVSLAKYTAHLSDKFAKERGAFTVVVSGGSLIKSLRKLVEAPYVDSI 73

Query: 423 DWSKWHVFWVDERVVPKDHPD 361
           DWSKW VFWVDERVVPKDHPD
Sbjct: 74  DWSKWQVFWVDERVVPKDHPD 94



 Score = 78.6 bits (192), Expect(2) = 6e-40
 Identities = 38/48 (79%), Positives = 41/48 (85%)
 Frame = -3

Query: 367 PRYHPDSNYLLAYDNFLSKVPILPSNVYAINDALSAEGAADDYETQLR 224
           P+ HPDSNY LA+D FLSKVPI   NVYAINDALSAEGAADDYET L+
Sbjct: 89  PKDHPDSNYKLAFDGFLSKVPIPHGNVYAINDALSAEGAADDYETCLK 136


Top