BLASTX nr result

ID: Panax21_contig00008340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008340
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19031.3| unnamed protein product [Vitis vinifera]              264   6e-69
ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchor...   264   6e-69
gb|ACD56618.1| peptidoglycan-binding LysM domain-containing rela...   243   9e-63
ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchor...   241   6e-62
ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|2...   238   3e-61

>emb|CBI19031.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score =  264 bits (674), Expect = 6e-69
 Identities = 131/166 (78%), Positives = 140/166 (84%), Gaps = 2/166 (1%)
 Frame = -1

Query: 497 LMVPNGSYAITASHCVQCSCVPGSQNLYCTPASLAVSCSSMQCRNSNLMLGNVTVQQSSA 318
           L VPNGSYAITASHCVQCSC PGS NLYC PASLAVSCSSMQCRN+NLMLGNVT+Q+SSA
Sbjct: 226 LAVPNGSYAITASHCVQCSCGPGSLNLYCMPASLAVSCSSMQCRNTNLMLGNVTMQKSSA 285

Query: 317 GCNVTSCSYGGFVNGTIITTLSTSLQPRCPGPQQFPALIAPPTVVGTDSLFAPAPSPFQS 138
           GCNVTSCSYGGFVNGTII TL+TSLQPRCPG QQFP LIAPP+ V  DS +AP+PSP QS
Sbjct: 286 GCNVTSCSYGGFVNGTIIATLTTSLQPRCPGIQQFPPLIAPPSSVIRDSFYAPSPSPSQS 345

Query: 137 GGPGATIPKS--VPSPGSVFGFPPANGPSGSISGASFLVNPLTSFP 6
            G G TIP    VPS GS+ GF PANGP+GS S AS LVNPL SFP
Sbjct: 346 DGAGTTIPSPSVVPSTGSIPGFAPANGPTGSASDASSLVNPLASFP 391


>ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchored protein 1 [Vitis
           vinifera]
          Length = 418

 Score =  264 bits (674), Expect = 6e-69
 Identities = 131/166 (78%), Positives = 140/166 (84%), Gaps = 2/166 (1%)
 Frame = -1

Query: 497 LMVPNGSYAITASHCVQCSCVPGSQNLYCTPASLAVSCSSMQCRNSNLMLGNVTVQQSSA 318
           L VPNGSYAITASHCVQCSC PGS NLYC PASLAVSCSSMQCRN+NLMLGNVT+Q+SSA
Sbjct: 236 LAVPNGSYAITASHCVQCSCGPGSLNLYCMPASLAVSCSSMQCRNTNLMLGNVTMQKSSA 295

Query: 317 GCNVTSCSYGGFVNGTIITTLSTSLQPRCPGPQQFPALIAPPTVVGTDSLFAPAPSPFQS 138
           GCNVTSCSYGGFVNGTII TL+TSLQPRCPG QQFP LIAPP+ V  DS +AP+PSP QS
Sbjct: 296 GCNVTSCSYGGFVNGTIIATLTTSLQPRCPGIQQFPPLIAPPSSVIRDSFYAPSPSPSQS 355

Query: 137 GGPGATIPKS--VPSPGSVFGFPPANGPSGSISGASFLVNPLTSFP 6
            G G TIP    VPS GS+ GF PANGP+GS S AS LVNPL SFP
Sbjct: 356 DGAGTTIPSPSVVPSTGSIPGFAPANGPTGSASDASSLVNPLASFP 401


>gb|ACD56618.1| peptidoglycan-binding LysM domain-containing related protein
           [Gossypioides kirkii]
          Length = 453

 Score =  243 bits (621), Expect = 9e-63
 Identities = 118/164 (71%), Positives = 133/164 (81%)
 Frame = -1

Query: 497 LMVPNGSYAITASHCVQCSCVPGSQNLYCTPASLAVSCSSMQCRNSNLMLGNVTVQQSSA 318
           L+VPNGSYAITASHCVQCSC  GS+NLYC P+SLAVSCSSMQC++SNL LGNVTVQQS+A
Sbjct: 238 LIVPNGSYAITASHCVQCSCGLGSRNLYCMPSSLAVSCSSMQCKSSNLKLGNVTVQQSTA 297

Query: 317 GCNVTSCSYGGFVNGTIITTLSTSLQPRCPGPQQFPALIAPPTVVGTDSLFAPAPSPFQS 138
           GCNVTSC+YGG+ NGTIIT LS+SLQPRCPGPQQFP L+APPT V  DS FAPAP+P   
Sbjct: 298 GCNVTSCAYGGYANGTIITWLSSSLQPRCPGPQQFPPLVAPPTHVTRDSAFAPAPAPQSD 357

Query: 137 GGPGATIPKSVPSPGSVFGFPPANGPSGSISGASFLVNPLTSFP 6
           GG   T+PK+VPS GS  G  PA  P GS S AS LVN + + P
Sbjct: 358 GGTTTTVPKTVPSTGSHPGLGPAGAPIGSASDASTLVNSVAAVP 401


>ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
           [Cucumis sativus] gi|449528597|ref|XP_004171290.1|
           PREDICTED: lysM domain-containing GPI-anchored protein
           1-like [Cucumis sativus]
          Length = 432

 Score =  241 bits (614), Expect = 6e-62
 Identities = 124/174 (71%), Positives = 136/174 (78%), Gaps = 10/174 (5%)
 Frame = -1

Query: 497 LMVPNGSYAITASHCVQCSCVPGSQNLYCTPASLAVSCSSMQCRNSNLMLGNVTVQQSSA 318
           L+VPNGSYAITASHCVQCSC PG+ N+YC PA  AVSCSSMQC+NSNLMLGNVT QQSSA
Sbjct: 243 LIVPNGSYAITASHCVQCSCGPGNLNMYCMPAPFAVSCSSMQCKNSNLMLGNVTAQQSSA 302

Query: 317 GCNVTSCSYGGFVNGTIITTLSTSLQPRCPGPQQFPALIAPPTVVGTDSLFAPAPSPFQS 138
           GCNVTSCSYGGFVNGTI+T LS++LQPRCPGPQQFP L APPT V  D  FAPAP+P Q 
Sbjct: 303 GCNVTSCSYGGFVNGTILTMLSSNLQPRCPGPQQFPPLKAPPTTVSRDKNFAPAPAP-QF 361

Query: 137 GGPGATIPKS--VPS-PGSVFGFPPANGPSGSISG-------ASFLVNPLTSFP 6
            G G+  P S  +PS  GS+ G PPA+GP GS SG       AS LVNPL SFP
Sbjct: 362 DGSGSPAPSSGLIPSTTGSLPGLPPASGPIGSTSGMNSAPSTASSLVNPLASFP 415


>ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|222842720|gb|EEE80267.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  238 bits (608), Expect = 3e-61
 Identities = 121/162 (74%), Positives = 133/162 (82%), Gaps = 3/162 (1%)
 Frame = -1

Query: 497 LMVPNGSYAITASHCVQCSCVPGSQNLYCTPASLAVSCSSMQCRNSNLMLGNVTVQQSSA 318
           L+VPNGSYAI+ASHCVQCSC PG+ NLYC PASLAVSCSSMQCRNSNLMLGNVTVQQSSA
Sbjct: 232 LIVPNGSYAISASHCVQCSCGPGNLNLYCMPASLAVSCSSMQCRNSNLMLGNVTVQQSSA 291

Query: 317 GCNVTSCSYGGFVNGTIITTLSTSLQPRCPGPQQFPALIAPPTVVGTDSLFAPAPSPFQS 138
           GCNVTSC+YGG+VNGTI+TTLST LQPRCPG QQFP L+ PPT V  DS FAPAP+P   
Sbjct: 292 GCNVTSCNYGGYVNGTIMTTLSTYLQPRCPGSQQFPPLVVPPTTVIRDSTFAPAPAPQSD 351

Query: 137 GGPGAT-IPKS--VPSPGSVFGFPPANGPSGSISGASFLVNP 21
           G    T  PK+  VP+ GS+ G PPA+GP GSIS  SF VNP
Sbjct: 352 GSSTPTPTPKTEVVPATGSLPGLPPASGPVGSIS-LSFSVNP 392


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