BLASTX nr result

ID: Panax21_contig00008293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008293
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glyci...   321   6e-86
ref|XP_003532202.1| PREDICTED: THO complex subunit 3-like [Glyci...   320   1e-85
ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucum...   316   2e-84
ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucum...   316   2e-84
ref|XP_002274754.1| PREDICTED: THO complex subunit 3 [Vitis vini...   314   8e-84

>ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  321 bits (822), Expect = 6e-86
 Identities = 149/162 (91%), Positives = 158/162 (97%)
 Frame = +1

Query: 1   ARIWHIESYGHGKGKEIELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQ 180
           ARIWHIE +GHGK K+IELKGHTDSVDQLCWDPKH+DLIATASGDKTVRLWDARSGKCSQ
Sbjct: 43  ARIWHIEPHGHGKVKDIELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ 102

Query: 181 LAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGDM 360
            AELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTG+M
Sbjct: 103 QAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEM 162

Query: 361 FFLTTGNGTVEVLAYPSLKAVDTLMAHTAGCYCIAIDPLGRF 486
           FFLTTGNGTVEVL+YPSL+ +DTLMAHTAGCYCIAIDP+GR+
Sbjct: 163 FFLTTGNGTVEVLSYPSLRPLDTLMAHTAGCYCIAIDPVGRY 204


>ref|XP_003532202.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  320 bits (819), Expect = 1e-85
 Identities = 148/162 (91%), Positives = 158/162 (97%)
 Frame = +1

Query: 1   ARIWHIESYGHGKGKEIELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQ 180
           ARIWHIE +GHGK K+IELKGHTDSVDQLCWDPKH+DLIATASGDKTVRLWDARSGKCSQ
Sbjct: 43  ARIWHIEPHGHGKVKDIELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ 102

Query: 181 LAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGDM 360
            AELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEI+WNMTG+M
Sbjct: 103 QAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEISWNMTGEM 162

Query: 361 FFLTTGNGTVEVLAYPSLKAVDTLMAHTAGCYCIAIDPLGRF 486
           FFLTTGNGTVEVL+YPSL+ +DTLMAHTAGCYCIAIDP+GR+
Sbjct: 163 FFLTTGNGTVEVLSYPSLRPLDTLMAHTAGCYCIAIDPVGRY 204


>ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  316 bits (809), Expect = 2e-84
 Identities = 143/162 (88%), Positives = 157/162 (96%)
 Frame = +1

Query: 1   ARIWHIESYGHGKGKEIELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQ 180
           AR+WHIE +GHGK K++ELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GKCSQ
Sbjct: 44  ARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQ 103

Query: 181 LAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGDM 360
            AELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNMTG+M
Sbjct: 104 QAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEM 163

Query: 361 FFLTTGNGTVEVLAYPSLKAVDTLMAHTAGCYCIAIDPLGRF 486
           FFLTTGNGTVEVLAYPSL+ ++TLMAHTAGCYCIAIDP+G +
Sbjct: 164 FFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGY 205


>ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  316 bits (809), Expect = 2e-84
 Identities = 143/162 (88%), Positives = 157/162 (96%)
 Frame = +1

Query: 1   ARIWHIESYGHGKGKEIELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQ 180
           AR+WHIE +GHGK K++ELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GKCSQ
Sbjct: 44  ARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQ 103

Query: 181 LAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGDM 360
            AELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNMTG+M
Sbjct: 104 QAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEM 163

Query: 361 FFLTTGNGTVEVLAYPSLKAVDTLMAHTAGCYCIAIDPLGRF 486
           FFLTTGNGTVEVLAYPSL+ ++TLMAHTAGCYCIAIDP+G +
Sbjct: 164 FFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGY 205


>ref|XP_002274754.1| PREDICTED: THO complex subunit 3 [Vitis vinifera]
           gi|147789347|emb|CAN62349.1| hypothetical protein
           VITISV_004943 [Vitis vinifera]
           gi|296089987|emb|CBI39806.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  314 bits (804), Expect = 8e-84
 Identities = 145/162 (89%), Positives = 157/162 (96%)
 Frame = +1

Query: 1   ARIWHIESYGHGKGKEIELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQ 180
           ARIW IE +GHGK K+IELKGHTDSVDQLCWDPKH+DLIATASGDKTVRLWDARSGKC+Q
Sbjct: 43  ARIWLIEQHGHGKVKDIELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQ 102

Query: 181 LAELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGDM 360
            AELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKPIHRRKF+YEVNEIAWNMTG+M
Sbjct: 103 QAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFSYEVNEIAWNMTGEM 162

Query: 361 FFLTTGNGTVEVLAYPSLKAVDTLMAHTAGCYCIAIDPLGRF 486
           FFLTTGNGTVEVLAYP+L+ +DTLMAHTAGCYCIAIDP+GR+
Sbjct: 163 FFLTTGNGTVEVLAYPALRPLDTLMAHTAGCYCIAIDPIGRY 204


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