BLASTX nr result
ID: Panax21_contig00008285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008285
(1092 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003611078.1| Cyclin-L1-1 [Medicago truncatula] gi|3555124... 282 1e-86
ref|XP_003611077.1| Cyclin-L1-1 [Medicago truncatula] gi|3555124... 282 1e-86
ref|XP_002312033.1| predicted protein [Populus trichocarpa] gi|2... 288 6e-84
ref|XP_003614534.1| Cyclin-L1-1 [Medicago truncatula] gi|3555158... 274 1e-83
ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus... 312 8e-83
>ref|XP_003611078.1| Cyclin-L1-1 [Medicago truncatula] gi|355512413|gb|AES94036.1|
Cyclin-L1-1 [Medicago truncatula]
Length = 438
Score = 282 bits (721), Expect(2) = 1e-86
Identities = 143/215 (66%), Positives = 166/215 (77%), Gaps = 3/215 (1%)
Frame = -1
Query: 1092 HLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRTTLCVRFKSEVVACG 913
H+LKEMGFICHVEHPHKFISNYLATLETPPEL QEAWNLANDSLRTTLCVRFKSEVVACG
Sbjct: 140 HILKEMGFICHVEHPHKFISNYLATLETPPELSQEAWNLANDSLRTTLCVRFKSEVVACG 199
Query: 912 VVYAAARRFQVALPENPPWWKAFDADKSGIDEVCRVLAHLYSLPKSQYIPVCKEGGSFTT 733
VVYAAARRF+V LPENPPWWKAFDA+KSGIDEVCRVLAHLYSLPK+QY+P+CKE SFT
Sbjct: 200 VVYAAARRFEVPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAQYLPICKEWDSFTF 259
Query: 732 SSRSWDPPSQSVPKECLSTCPPTNDDLNTTSTA---INIDSGVSKDSLIKAAIGKLKESK 562
S+ S + SQS K+ + P N + + A NIDS SK +L+K A KL +++
Sbjct: 260 SNISLESKSQSTAKDAPQSSSPMNAETSALKGAHGEANIDSTGSKGALVKQASDKLNDAR 319
Query: 561 RSDDVSKSMPPVEGEAREEPIPRKPKSEHKMEVGG 457
+SDD SK M E + ++EP K K + KM+ G
Sbjct: 320 KSDDDSKGM-AAERDVKDEP-TLKSKPDRKMDASG 352
Score = 65.5 bits (158), Expect(2) = 1e-86
Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 3/50 (6%)
Frame = -3
Query: 376 KVRDRTHRSKDKGKDSGHPEKLKHHSSRERD---HHCSYSSREKDRHRHH 236
+++DR HRS+++ KDSGH +K K HSS +RD + SYSSREKDRHR+H
Sbjct: 389 RLKDRGHRSRERAKDSGHSDKSKRHSSHDRDRDYYSSSYSSREKDRHRYH 438
>ref|XP_003611077.1| Cyclin-L1-1 [Medicago truncatula] gi|355512412|gb|AES94035.1|
Cyclin-L1-1 [Medicago truncatula]
Length = 331
Score = 282 bits (721), Expect(2) = 1e-86
Identities = 143/215 (66%), Positives = 166/215 (77%), Gaps = 3/215 (1%)
Frame = -1
Query: 1092 HLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRTTLCVRFKSEVVACG 913
H+LKEMGFICHVEHPHKFISNYLATLETPPEL QEAWNLANDSLRTTLCVRFKSEVVACG
Sbjct: 33 HILKEMGFICHVEHPHKFISNYLATLETPPELSQEAWNLANDSLRTTLCVRFKSEVVACG 92
Query: 912 VVYAAARRFQVALPENPPWWKAFDADKSGIDEVCRVLAHLYSLPKSQYIPVCKEGGSFTT 733
VVYAAARRF+V LPENPPWWKAFDA+KSGIDEVCRVLAHLYSLPK+QY+P+CKE SFT
Sbjct: 93 VVYAAARRFEVPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAQYLPICKEWDSFTF 152
Query: 732 SSRSWDPPSQSVPKECLSTCPPTNDDLNTTSTA---INIDSGVSKDSLIKAAIGKLKESK 562
S+ S + SQS K+ + P N + + A NIDS SK +L+K A KL +++
Sbjct: 153 SNISLESKSQSTAKDAPQSSSPMNAETSALKGAHGEANIDSTGSKGALVKQASDKLNDAR 212
Query: 561 RSDDVSKSMPPVEGEAREEPIPRKPKSEHKMEVGG 457
+SDD SK M E + ++EP K K + KM+ G
Sbjct: 213 KSDDDSKGM-AAERDVKDEP-TLKSKPDRKMDASG 245
Score = 65.5 bits (158), Expect(2) = 1e-86
Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 3/50 (6%)
Frame = -3
Query: 376 KVRDRTHRSKDKGKDSGHPEKLKHHSSRERD---HHCSYSSREKDRHRHH 236
+++DR HRS+++ KDSGH +K K HSS +RD + SYSSREKDRHR+H
Sbjct: 282 RLKDRGHRSRERAKDSGHSDKSKRHSSHDRDRDYYSSSYSSREKDRHRYH 331
>ref|XP_002312033.1| predicted protein [Populus trichocarpa] gi|222851853|gb|EEE89400.1|
predicted protein [Populus trichocarpa]
Length = 421
Score = 288 bits (738), Expect(2) = 6e-84
Identities = 151/216 (69%), Positives = 171/216 (79%), Gaps = 4/216 (1%)
Frame = -1
Query: 1092 HLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRTTLCVRFKSEVVACG 913
H+LKEMGF+CHVEHPHKFISNYL TL TP ELRQEAWNLANDSLRTTLCVRFKS VVACG
Sbjct: 140 HILKEMGFVCHVEHPHKFISNYLMTLGTPQELRQEAWNLANDSLRTTLCVRFKSAVVACG 199
Query: 912 VVYAAARRFQVALPENPPWWKAFDADKSGIDEVCRVLAHLYSLPKSQYIPVCKEGGSFTT 733
VVYAAARRFQV LPENPPWWKAFDA+KSGIDEVCRVLAHLYSLPK+QY+ VCK+ G F+
Sbjct: 200 VVYAAARRFQVPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAQYVSVCKD-GDFSF 258
Query: 732 SSRSWDPPSQSVPKEC-LSTCPPTNDDLNTTSTA---INIDSGVSKDSLIKAAIGKLKES 565
S++S D Q + KE +T P N+D A +N++SG SKD + K A+ KLKES
Sbjct: 259 SNKSSDSQLQLISKEIPRTTSLPANNDSTEPKAAPSGVNVESGGSKD-ITKVALDKLKES 317
Query: 564 KRSDDVSKSMPPVEGEAREEPIPRKPKSEHKMEVGG 457
K++DD SK P EGEAREE IPR KSEH+ E GG
Sbjct: 318 KKTDDESK---PAEGEAREELIPRS-KSEHRTEAGG 349
Score = 50.1 bits (118), Expect(2) = 6e-84
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -3
Query: 379 EKVRDRTHRSKDKGKDSGHPEKLKHHSSRERDHHCS-YSSREKDRHRHHSY 230
E+ RD R +D+ KD R+RD+H S YSSREKDRHRHHSY
Sbjct: 382 ERERDEIERDRDRAKD------------RDRDYHSSSYSSREKDRHRHHSY 420
>ref|XP_003614534.1| Cyclin-L1-1 [Medicago truncatula] gi|355515869|gb|AES97492.1|
Cyclin-L1-1 [Medicago truncatula]
Length = 428
Score = 274 bits (701), Expect(2) = 1e-83
Identities = 139/215 (64%), Positives = 166/215 (77%), Gaps = 3/215 (1%)
Frame = -1
Query: 1092 HLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRTTLCVRFKSEVVACG 913
H+LKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRT+LCVRFKSE+VACG
Sbjct: 140 HILKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRTSLCVRFKSEIVACG 199
Query: 912 VVYAAARRFQVALPENPPWWKAFDADKSGIDEVCRVLAHLYSLPKSQYIPVCKEGGSFTT 733
VVYAAARRFQV LPENPPWWKAFDA+KSGIDEVCRVLAHLYSLPK+QYIPVCK+ SFT
Sbjct: 200 VVYAAARRFQVPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAQYIPVCKDEDSFTF 259
Query: 732 SSRSWDPPSQSVPKECLSTCPPTNDDLNTTSTAI---NIDSGVSKDSLIKAAIGKLKESK 562
S++S + + VP+ + PTN + A+ NID SK +L+K KL +++
Sbjct: 260 SNKSLESKAMDVPQ----SSSPTNAETPALKGALEEANIDLSSSKGALVKQTSDKLNDAR 315
Query: 561 RSDDVSKSMPPVEGEAREEPIPRKPKSEHKMEVGG 457
+SDD SK E + ++E + K KS+ ++E G
Sbjct: 316 KSDDESKG-TAAERDVKDE-LTFKSKSDRRVEASG 348
Score = 63.2 bits (152), Expect(2) = 1e-83
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 376 KVRDRTHRSKDKGKDSGHPEKLKHHSSRERDHH-CSYSSREKDRHRHH 236
K++D H S+ + +DSGH EK K HSS +RD++ SYSSREKDR RHH
Sbjct: 381 KLKDHGHHSRQRARDSGHSEKSKRHSSHDRDYYSSSYSSREKDRRRHH 428
>ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus]
gi|449485709|ref|XP_004157252.1| PREDICTED:
cyclin-L1-1-like [Cucumis sativus]
Length = 443
Score = 312 bits (800), Expect = 8e-83
Identities = 153/213 (71%), Positives = 176/213 (82%), Gaps = 2/213 (0%)
Frame = -1
Query: 1092 HLLKEMGFICHVEHPHKFISNYLATLETPPELRQEAWNLANDSLRTTLCVRFKSEVVACG 913
H+LKEMGFICHVEHPHKFISNYLATL TPPELRQEAWNLANDSLRTTLCVRFKSEVVACG
Sbjct: 140 HILKEMGFICHVEHPHKFISNYLATLGTPPELRQEAWNLANDSLRTTLCVRFKSEVVACG 199
Query: 912 VVYAAARRFQVALPENPPWWKAFDADKSGIDEVCRVLAHLYSLPKSQYIPVCKEGGSFTT 733
VVYAAARRFQV LPENPPWWKAFD +KSGIDEVCRVLAHLY+LPK+QYIPVCK+G SFT
Sbjct: 200 VVYAAARRFQVPLPENPPWWKAFDGEKSGIDEVCRVLAHLYTLPKAQYIPVCKDGDSFTF 259
Query: 732 SSRSWDPPSQSVPKECLSTCPPTNDD--LNTTSTAINIDSGVSKDSLIKAAIGKLKESKR 559
S++SWD S V KE + P NDD + ++ N++SGVSKD ++K A+ KLKESK+
Sbjct: 260 SNKSWDSQSLPVAKEVPQSSPTANDDPSIVKATSGTNLESGVSKDEMLKLALNKLKESKK 319
Query: 558 SDDVSKSMPPVEGEAREEPIPRKPKSEHKMEVG 460
SDD SKS+ P E REE +PR KS+ + ++G
Sbjct: 320 SDDESKSLMP-EATTREELVPRS-KSDRRADIG 350
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/50 (68%), Positives = 43/50 (86%), Gaps = 2/50 (4%)
Frame = -3
Query: 379 EKVRDRTHRSKDKGKD-SGHPEKLKHHSSRERDHH-CSYSSREKDRHRHH 236
EK++DR HRSKD+GK+ GH EK +HHSSR+R++H SYSSR+KDRHRHH
Sbjct: 394 EKIKDRAHRSKDRGKELGGHLEKSRHHSSRDREYHSSSYSSRDKDRHRHH 443