BLASTX nr result

ID: Panax21_contig00008280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008280
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...   298   3e-79
ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   298   3e-79
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   295   2e-78
ref|XP_004145638.1| PREDICTED: eukaryotic translation initiation...   294   7e-78
ref|XP_002524226.1| Eukaryotic translation initiation factor 3 R...   293   2e-77

>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  298 bits (764), Expect = 3e-79
 Identities = 145/184 (78%), Positives = 162/184 (88%), Gaps = 2/184 (1%)
 Frame = -1

Query: 547 LDFLLPPRQVIGPDQNGMKKAVEYRFNDDGNKVKIXXXTRVRKLANARLSKRAVERRSWS 368
           LDFLLPP+QVIGPD+NG+KK +EY+FNDDGNKVKI   TRVRKLA ARLSKRA+ERR+WS
Sbjct: 26  LDFLLPPKQVIGPDENGIKKVIEYKFNDDGNKVKITTTTRVRKLAKARLSKRALERRNWS 85

Query: 367 KFGDAVHEDVGARLTMVSTEEIILERPRAPGTKADETKAAGDALSQIGKAGAVLMVCRTC 188
           KFGDA+HEDVG+RLTMVSTEEI+LERPRA G KADETK AGD L+Q+GK GAVLMVCRTC
Sbjct: 86  KFGDAIHEDVGSRLTMVSTEEILLERPRAHGAKADETKIAGDNLAQLGKGGAVLMVCRTC 145

Query: 187 GKKGDHWTSRCPYKDLAPQSESLTDQPPTSEA--AAPGGTKGAYVPPSMRAGAERSSGTD 14
           GKKGDHWTSRCPYKDLA   E+  D+PP +E   AA G TKGAYVPPSMRAGAER+ G+D
Sbjct: 146 GKKGDHWTSRCPYKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERTVGSD 205

Query: 13  MRRR 2
           MRRR
Sbjct: 206 MRRR 209


>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score =  298 bits (764), Expect = 3e-79
 Identities = 145/184 (78%), Positives = 161/184 (87%), Gaps = 2/184 (1%)
 Frame = -1

Query: 547 LDFLLPPRQVIGPDQNGMKKAVEYRFNDDGNKVKIXXXTRVRKLANARLSKRAVERRSWS 368
           LDFLLPP+QVIGPD NG+KK +EY+FNDDGNK+KI   TRVRKLA ARLSKRAVERR+W 
Sbjct: 25  LDFLLPPKQVIGPDDNGIKKVIEYKFNDDGNKIKITTTTRVRKLAKARLSKRAVERRNWP 84

Query: 367 KFGDAVHEDVGARLTMVSTEEIILERPRAPGTKADETKAAGDALSQIGKAGAVLMVCRTC 188
           KFGDAVHEDVG+RLTMVSTEEI+LERPRAPGTKADE K AGD L+Q+GK GAVLMVCRTC
Sbjct: 85  KFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKADEAKMAGDNLAQLGKGGAVLMVCRTC 144

Query: 187 GKKGDHWTSRCPYKDLAPQSESLTDQPPTSEA--AAPGGTKGAYVPPSMRAGAERSSGTD 14
           GKKGDHWTSRCPYKDLA   E+  D+P  +E   AA G TKGAYVPPSMRAGAER++G+D
Sbjct: 145 GKKGDHWTSRCPYKDLAQPPETFIDKPAATETAMAASGATKGAYVPPSMRAGAERTTGSD 204

Query: 13  MRRR 2
           MRRR
Sbjct: 205 MRRR 208


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score =  295 bits (756), Expect = 2e-78
 Identities = 144/184 (78%), Positives = 162/184 (88%), Gaps = 2/184 (1%)
 Frame = -1

Query: 547 LDFLLPPRQVIGPDQNGMKKAVEYRFNDDGNKVKIXXXTRVRKLANARLSKRAVERRSWS 368
           LDFLLPPRQVIGPD NG+KK +EY+FNDDGNKVKI   TR+RKLA ARLSKRA+ERRSW+
Sbjct: 29  LDFLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKLAKARLSKRAIERRSWA 88

Query: 367 KFGDAVHEDVGARLTMVSTEEIILERPRAPGTKADETKAAGDALSQIGKAGAVLMVCRTC 188
           KFGDAVHEDVG+RLTMVSTEEI+LERPRAPG+KA+E+K AGD+L+Q+GK GAVLMVCRTC
Sbjct: 89  KFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLAQLGKGGAVLMVCRTC 148

Query: 187 GKKGDHWTSRCPYKDLAPQSESLTDQPPTSE--AAAPGGTKGAYVPPSMRAGAERSSGTD 14
           GKKGDHWTSRCPYKDLAP SE   D+P  SE  A A G +KG YVPP MRAGAER +GT+
Sbjct: 149 GKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPGMRAGAER-TGTE 207

Query: 13  MRRR 2
           MRRR
Sbjct: 208 MRRR 211


>ref|XP_004145638.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           G-like [Cucumis sativus]
           gi|449530442|ref|XP_004172204.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit G-like [Cucumis
           sativus]
          Length = 288

 Score =  294 bits (752), Expect = 7e-78
 Identities = 145/184 (78%), Positives = 164/184 (89%), Gaps = 2/184 (1%)
 Frame = -1

Query: 547 LDFLLPPRQVIGPDQNGMKKAVEYRFNDDGNKVKIXXXTRVRKLANARLSKRAVERRSWS 368
           LDFLLPP+Q+IGPD+NG+KK VEY+FN+DGNKVKI   TR RKLA+ARLSK AVERRSW+
Sbjct: 22  LDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTRTRKLAHARLSKHAVERRSWA 81

Query: 367 KFGDAVHEDVGARLTMVSTEEIILERPRAPGTKADETKAAGDALSQIGKAGAVLMVCRTC 188
           KFGDAVHEDVG+RLTMVSTEEI+LERPRAPG+K +E K AGD L+Q+GK GAVLMVCRTC
Sbjct: 82  KFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTC 141

Query: 187 GKKGDHWTSRCPYKDLAPQSESLTDQP--PTSEAAAPGGTKGAYVPPSMRAGAERSSGTD 14
           GKKGDHWTSRCPYKDLAPQ++ L D+P  P + AAAPG TKGAYVPP MRAGAER +GTD
Sbjct: 142 GKKGDHWTSRCPYKDLAPQADGL-DKPVAPETTAAAPGATKGAYVPPGMRAGAER-TGTD 199

Query: 13  MRRR 2
           MRRR
Sbjct: 200 MRRR 203


>ref|XP_002524226.1| Eukaryotic translation initiation factor 3 RNA-binding subunit,
           putative [Ricinus communis] gi|223536503|gb|EEF38150.1|
           Eukaryotic translation initiation factor 3 RNA-binding
           subunit, putative [Ricinus communis]
          Length = 221

 Score =  293 bits (749), Expect = 2e-77
 Identities = 141/183 (77%), Positives = 160/183 (87%), Gaps = 2/183 (1%)
 Frame = -1

Query: 547 LDFLLPPRQVIGPDQNGMKKAVEYRFNDDGNKVKIXXXTRVRKLANARLSKRAVERRSWS 368
           LDFLLPP+QVIGPD NG+K+ +EY+FNDDGNK+KI   TRVRKLA ARLSK A+ERR+W 
Sbjct: 22  LDFLLPPKQVIGPDDNGIKRVIEYKFNDDGNKIKITTTTRVRKLAKARLSKSAIERRNWP 81

Query: 367 KFGDAVHEDVGARLTMVSTEEIILERPRAPGTKADETKAAGDALSQIGKAGAVLMVCRTC 188
           KFGDAVHEDVGARLTMVSTEEI+LERPRAPGTK +ETK  GD L+Q+GKAGAVLMVCRTC
Sbjct: 82  KFGDAVHEDVGARLTMVSTEEILLERPRAPGTKMEETKLPGDNLAQLGKAGAVLMVCRTC 141

Query: 187 GKKGDHWTSRCPYKDLAPQSESLTDQPPTSE--AAAPGGTKGAYVPPSMRAGAERSSGTD 14
           GKKGDHWTSRCPYKDLA  +++ +D+PP SE   AA G  K AYVPPSMRAGAER+SG+D
Sbjct: 142 GKKGDHWTSRCPYKDLAVSTDTFSDKPPASETATAASGTAKAAYVPPSMRAGAERTSGSD 201

Query: 13  MRR 5
           MRR
Sbjct: 202 MRR 204