BLASTX nr result

ID: Panax21_contig00008278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008278
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15210.3| unnamed protein product [Vitis vinifera]              387   e-115
ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4...   382   e-113
gb|AFK37078.1| unknown [Lotus japonicus]                              381   e-112
ref|XP_002514741.1| chlorophyll A/B binding protein, putative [R...   379   e-112
gb|ABK96327.1| unknown [Populus trichocarpa x Populus deltoides]      379   e-112

>emb|CBI15210.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  387 bits (995), Expect(2) = e-115
 Identities = 187/212 (88%), Positives = 195/212 (91%)
 Frame = +2

Query: 32  MAAVTTHASVAVFRPCAYKSRFLTGSSGKLNRELSVKPAACDSFKVEAKKGEWLPGLASP 211
           MA VTT AS AVFRPCA KSRFLTGSSGKL RE+SVKP    SFKVEAKKGEWLPGL+SP
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLTGSSGKLGREVSVKPMTSSSFKVEAKKGEWLPGLSSP 60

Query: 212 RYLDGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGLINV 391
            YLDGSLPGDNGFDPL LAEDPENLKW+VQAELVN RWAMLGVAGMLLPEVFTKIG+IN 
Sbjct: 61  SYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIGIINA 120

Query: 392 PAWYDAGKSDYFASSSTLLVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNKVG 571
           P WYDAGK++YFASSSTL VIEFILFHYVEIRRWQDIKNPGSVNQDPIFK+YSLPPN+VG
Sbjct: 121 PQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLPPNEVG 180

Query: 572 YPGGIFNPLNFAPTVAAKEKELANGRLAMLAF 667
           YPGGIFNPLNFAPT  AKEKELANGRLAMLAF
Sbjct: 181 YPGGIFNPLNFAPTEEAKEKELANGRLAMLAF 212



 Score = 54.3 bits (129), Expect(2) = e-115
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +1

Query: 745 GPFDNLLQHLSDPWHNTIVQTFRG 816
           GPFDNLLQH+SDPWHNTI+QT RG
Sbjct: 225 GPFDNLLQHISDPWHNTIIQTLRG 248


>ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|147843386|emb|CAN79984.1| hypothetical
           protein VITISV_038035 [Vitis vinifera]
          Length = 252

 Score =  382 bits (981), Expect(2) = e-113
 Identities = 187/215 (86%), Positives = 195/215 (90%), Gaps = 3/215 (1%)
 Frame = +2

Query: 32  MAAVTTHASVAVFRPCAYKSRFLTGSSGKLNRELSVKPAACDS---FKVEAKKGEWLPGL 202
           MA VTT AS AVFRPCA KSRFLTGSSGKL RE+SVKP    S   FKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLTGSSGKLGREVSVKPMTSSSYRSFKVEAKKGEWLPGL 60

Query: 203 ASPRYLDGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGL 382
           +SP YLDGSLPGDNGFDPL LAEDPENLKW+VQAELVN RWAMLGVAGMLLPEVFTKIG+
Sbjct: 61  SSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIGI 120

Query: 383 INVPAWYDAGKSDYFASSSTLLVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPN 562
           IN P WYDAGK++YFASSSTL VIEFILFHYVEIRRWQDIKNPGSVNQDPIFK+YSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLPPN 180

Query: 563 KVGYPGGIFNPLNFAPTVAAKEKELANGRLAMLAF 667
           +VGYPGGIFNPLNFAPT  AKEKELANGRLAMLAF
Sbjct: 181 EVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAF 215



 Score = 54.3 bits (129), Expect(2) = e-113
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +1

Query: 745 GPFDNLLQHLSDPWHNTIVQTFRG 816
           GPFDNLLQH+SDPWHNTI+QT RG
Sbjct: 228 GPFDNLLQHISDPWHNTIIQTLRG 251


>gb|AFK37078.1| unknown [Lotus japonicus]
          Length = 252

 Score =  381 bits (978), Expect(2) = e-112
 Identities = 185/215 (86%), Positives = 195/215 (90%), Gaps = 3/215 (1%)
 Frame = +2

Query: 32  MAAVTTHASVAVFRPCAYKSRFLTGSSGKLNRELSVKPAACD---SFKVEAKKGEWLPGL 202
           MA VTT AS A+FRPCA +SRFLTGSSGKLNRE++ +P  C    SFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFRPCASRSRFLTGSSGKLNREVAFRPMGCPPSTSFKVEAKKGEWLPGL 60

Query: 203 ASPRYLDGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGL 382
           ASP YL+GSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWA LGVAGMLLPEV T IGL
Sbjct: 61  ASPNYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWATLGVAGMLLPEVLTNIGL 120

Query: 383 INVPAWYDAGKSDYFASSSTLLVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPN 562
           INVP WYDAGK++YFASSSTL VIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 563 KVGYPGGIFNPLNFAPTVAAKEKELANGRLAMLAF 667
           +VGYPGGIFNPLNFAPT  AKE+ELANGRLAMLAF
Sbjct: 181 EVGYPGGIFNPLNFAPTEEAKERELANGRLAMLAF 215



 Score = 53.1 bits (126), Expect(2) = e-112
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = +1

Query: 745 GPFDNLLQHLSDPWHNTIVQTFRG 816
           GPFDNLLQHLSDPWHNTIVQT  G
Sbjct: 228 GPFDNLLQHLSDPWHNTIVQTLSG 251


>ref|XP_002514741.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223546345|gb|EEF47847.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 251

 Score =  379 bits (973), Expect(2) = e-112
 Identities = 185/214 (86%), Positives = 194/214 (90%), Gaps = 2/214 (0%)
 Frame = +2

Query: 32  MAAVTTHASVAVFRPCAYKSRFLTGSSGKLNRELSVKPAACD--SFKVEAKKGEWLPGLA 205
           MA VTT AS AVFRPCA KSRFL+GS  KLNRE++ KP +    SFKVEAKKGEWLPGL 
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLSGSPSKLNREVAFKPMSSSPASFKVEAKKGEWLPGLP 60

Query: 206 SPRYLDGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGLI 385
           SP YL+GSLPGDNGFDPL LAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG+I
Sbjct: 61  SPAYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII 120

Query: 386 NVPAWYDAGKSDYFASSSTLLVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNK 565
           NVP WYDAGK +YFASSSTL VIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPN+
Sbjct: 121 NVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE 180

Query: 566 VGYPGGIFNPLNFAPTVAAKEKELANGRLAMLAF 667
           VGYPGGIFNPLNFAPT+ AKEKELANGRLAMLAF
Sbjct: 181 VGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAF 214



 Score = 55.1 bits (131), Expect(2) = e-112
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +1

Query: 745 GPFDNLLQHLSDPWHNTIVQTFRG 816
           GPFDNLLQHLSDPWHNTI+QTF G
Sbjct: 227 GPFDNLLQHLSDPWHNTIIQTFSG 250


>gb|ABK96327.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 251

 Score =  379 bits (973), Expect(2) = e-112
 Identities = 183/214 (85%), Positives = 193/214 (90%), Gaps = 2/214 (0%)
 Frame = +2

Query: 32  MAAVTTHASVAVFRPCAYKSRFLTGSSGKLNRELSVKPAACDS--FKVEAKKGEWLPGLA 205
           MA V+T AS AVFRPCAYKSRFL G+  KLNRELS+KP A  S  FKVEAKKGEWLPGL 
Sbjct: 1   MATVSTQASAAVFRPCAYKSRFLAGAPSKLNRELSIKPMASSSPSFKVEAKKGEWLPGLP 60

Query: 206 SPRYLDGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGLI 385
           SP YL+GSLPGDNGFDPL LAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIG+I
Sbjct: 61  SPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII 120

Query: 386 NVPAWYDAGKSDYFASSSTLLVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNK 565
           N P WYDAGK++YFASSSTL VIEFILFHYVEIRRWQDIKNPG VNQDPIFK YSLPPN+
Sbjct: 121 NAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNE 180

Query: 566 VGYPGGIFNPLNFAPTVAAKEKELANGRLAMLAF 667
            GYPGGIFNPLNFAPT+ AKEKELANGRLAMLAF
Sbjct: 181 CGYPGGIFNPLNFAPTIEAKEKELANGRLAMLAF 214



 Score = 54.7 bits (130), Expect(2) = e-112
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +1

Query: 745 GPFDNLLQHLSDPWHNTIVQTFRG 816
           GPFDNLLQH+SDPWHNTIVQTF G
Sbjct: 227 GPFDNLLQHISDPWHNTIVQTFSG 250


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