BLASTX nr result

ID: Panax21_contig00008263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008263
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265...    70   6e-10
ref|XP_002324606.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09
ref|XP_003607467.1| Integrator complex subunit [Medicago truncat...    67   9e-09
ref|XP_002532144.1| conserved hypothetical protein [Ricinus comm...    67   9e-09
ref|XP_004173177.1| PREDICTED: integrator complex subunit 7-like...    62   2e-07

>ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265170 [Vitis vinifera]
           gi|296082233|emb|CBI21238.3| unnamed protein product
           [Vitis vinifera]
          Length = 1166

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 4/59 (6%)
 Frame = -3

Query: 166 LQVKASLFTAGCFCELSDDFASVLLEILINIMSSSETSMGIRLA----LAKMGCLYSLA 2
           ++V+AS + A CFCELSDDFASV+LEIL+N++SSS+    +RLA     AKMGC  SLA
Sbjct: 174 VEVRASFYAAACFCELSDDFASVILEILVNMLSSSQMMSAVRLAGVRVFAKMGCSSSLA 232


>ref|XP_002324606.1| predicted protein [Populus trichocarpa] gi|222866040|gb|EEF03171.1|
           predicted protein [Populus trichocarpa]
          Length = 1237

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 4/61 (6%)
 Frame = -3

Query: 172 DPLQVKASLFTAGCFCELSDDFASVLLEILINIMSSSETSMGIRL----ALAKMGCLYSL 5
           D LQV+ASLF AGCFCEL+ DF  V+LE+L+N+++SSET + IRL      AKMG  YS+
Sbjct: 173 DVLQVQASLFAAGCFCELAGDFVPVVLEMLVNMVTSSETLLTIRLVGTRVFAKMGPSYSV 232

Query: 4   A 2
           A
Sbjct: 233 A 233


>ref|XP_003607467.1| Integrator complex subunit [Medicago truncatula]
           gi|355508522|gb|AES89664.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 358

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
 Frame = -3

Query: 163 QVKASLFTAGCFCELSDDFASVLLEILINIMSSSETSMGIRLA----LAKMGCLYSLA 2
           + KASLF AGCFCE+SDDFA + LE+L N+M+S E S+ I+LA     AK  C YS+A
Sbjct: 174 EAKASLFAAGCFCEISDDFACITLEMLFNMMNSPEVSLPIKLAAARVFAKFKCSYSVA 231


>ref|XP_002532144.1| conserved hypothetical protein [Ricinus communis]
           gi|223528180|gb|EEF30243.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1166

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = -3

Query: 166 LQVKASLFTAGCFCELSDDFASVLLEILINIMSSSETSMGIRLA----LAKMGCLYSLA 2
           L+VKASLF A CFCEL+ DFA V+LE+L NIM S +TS+ IRLA    +AKMG  YS A
Sbjct: 174 LEVKASLFAASCFCELAADFAYVVLEMLPNIMLSPDTSLTIRLAGVRVIAKMGSSYSTA 232


>ref|XP_004173177.1| PREDICTED: integrator complex subunit 7-like [Cucumis sativus]
          Length = 240

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 4/58 (6%)
 Frame = -3

Query: 163 QVKASLFTAGCFCELSDDFASVLLEILINIMSSSETSMGIRLA----LAKMGCLYSLA 2
           +VKAS+F A C C+L+DDFA V L IL+NIM+S+ TS+ IR+A     AK+GC +S+A
Sbjct: 174 EVKASIFAAACICQLADDFAQVFLAILVNIMTST-TSLTIRMAGARVFAKLGCSHSMA 230


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