BLASTX nr result

ID: Panax21_contig00008251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008251
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation...   221   1e-55
emb|CAN76773.1| hypothetical protein VITISV_017587 [Vitis vinifera]   221   1e-55
sp|P56821.1|EIF3B_TOBAC RecName: Full=Eukaryotic translation ini...   215   6e-54
ref|XP_004160247.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...   213   4e-53
ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation...   213   4e-53

>ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           [Vitis vinifera] gi|296082169|emb|CBI21174.3| unnamed
           protein product [Vitis vinifera]
          Length = 718

 Score =  221 bits (563), Expect = 1e-55
 Identities = 101/111 (90%), Positives = 106/111 (95%)
 Frame = -1

Query: 682 HEMENGFNIWSFNGKLLYRILKDHFFQYLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 503
           HEMENGFNIWSFNGKLLYRILKDHFFQ+LWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE
Sbjct: 578 HEMENGFNIWSFNGKLLYRILKDHFFQFLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 637

Query: 502 DQDVSLLLSEQDREKRKKLKDEWDMWVGRWKQWHEEEKLERQKLRDGEASD 350
           DQDVS+LLSEQDREKRK LKDEW+ WV  WK+WHEEEK ERQ+LRDGEASD
Sbjct: 638 DQDVSMLLSEQDREKRKMLKDEWERWVNDWKRWHEEEKAERQRLRDGEASD 688


>emb|CAN76773.1| hypothetical protein VITISV_017587 [Vitis vinifera]
          Length = 719

 Score =  221 bits (563), Expect = 1e-55
 Identities = 101/111 (90%), Positives = 106/111 (95%)
 Frame = -1

Query: 682 HEMENGFNIWSFNGKLLYRILKDHFFQYLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 503
           HEMENGFNIWSFNGKLLYRILKDHFFQ+LWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE
Sbjct: 578 HEMENGFNIWSFNGKLLYRILKDHFFQFLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 637

Query: 502 DQDVSLLLSEQDREKRKKLKDEWDMWVGRWKQWHEEEKLERQKLRDGEASD 350
           DQDVS+LLSEQDREKRK LKDEW+ WV  WK+WHEEEK ERQ+LRDGEASD
Sbjct: 638 DQDVSMLLSEQDREKRKMLKDEWERWVNDWKRWHEEEKAERQRLRDGEASD 688


>sp|P56821.1|EIF3B_TOBAC RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
           Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3
           p110 gi|5911685|emb|CAA72721.1| PRT1 protein [Nicotiana
           tabacum]
          Length = 719

 Score =  215 bits (548), Expect = 6e-54
 Identities = 99/111 (89%), Positives = 105/111 (94%)
 Frame = -1

Query: 682 HEMENGFNIWSFNGKLLYRILKDHFFQYLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 503
           HEMENGFNIWSFNGKLLYRILKDHFFQYLWRPRPPSFLS EKEEEIAKNLK+YSKKYEAE
Sbjct: 579 HEMENGFNIWSFNGKLLYRILKDHFFQYLWRPRPPSFLSKEKEEEIAKNLKRYSKKYEAE 638

Query: 502 DQDVSLLLSEQDREKRKKLKDEWDMWVGRWKQWHEEEKLERQKLRDGEASD 350
           DQDVSL LSEQDREKRKKLK+EW+ W+  WK+ HEEEK+ERQKLRDGEASD
Sbjct: 639 DQDVSLQLSEQDREKRKKLKEEWEAWINEWKRLHEEEKMERQKLRDGEASD 689


>ref|XP_004160247.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit B-like [Cucumis sativus]
          Length = 718

 Score =  213 bits (541), Expect = 4e-53
 Identities = 98/111 (88%), Positives = 104/111 (93%)
 Frame = -1

Query: 682 HEMENGFNIWSFNGKLLYRILKDHFFQYLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 503
           HEMENGFNIWSFNGKLLYRILKDHFFQ+ WRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE
Sbjct: 579 HEMENGFNIWSFNGKLLYRILKDHFFQFAWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 638

Query: 502 DQDVSLLLSEQDREKRKKLKDEWDMWVGRWKQWHEEEKLERQKLRDGEASD 350
           DQDVS+LLSEQ+RE+R+ LKDEWD WV  WK+ HEEEKL RQKLRDGEASD
Sbjct: 639 DQDVSMLLSEQERERRRMLKDEWDKWVNEWKRLHEEEKLLRQKLRDGEASD 689


>ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Cucumis sativus]
          Length = 718

 Score =  213 bits (541), Expect = 4e-53
 Identities = 98/111 (88%), Positives = 104/111 (93%)
 Frame = -1

Query: 682 HEMENGFNIWSFNGKLLYRILKDHFFQYLWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 503
           HEMENGFNIWSFNGKLLYRILKDHFFQ+ WRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE
Sbjct: 579 HEMENGFNIWSFNGKLLYRILKDHFFQFAWRPRPPSFLSPEKEEEIAKNLKKYSKKYEAE 638

Query: 502 DQDVSLLLSEQDREKRKKLKDEWDMWVGRWKQWHEEEKLERQKLRDGEASD 350
           DQDVS+LLSEQ+RE+R+ LKDEWD WV  WK+ HEEEKL RQKLRDGEASD
Sbjct: 639 DQDVSMLLSEQERERRRMLKDEWDKWVNEWKRLHEEEKLLRQKLRDGEASD 689


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