BLASTX nr result

ID: Panax21_contig00008249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008249
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37879.3| unnamed protein product [Vitis vinifera]              533   e-149
ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   533   e-149
ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   533   e-149
ref|XP_002530820.1| hect ubiquitin-protein ligase, putative [Ric...   517   e-144
ref|XP_003537809.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   515   e-144

>emb|CBI37879.3| unnamed protein product [Vitis vinifera]
          Length = 1352

 Score =  533 bits (1372), Expect = e-149
 Identities = 277/314 (88%), Positives = 296/314 (94%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3    STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 182
            STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF
Sbjct: 79   STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 138

Query: 183  ASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSPSTYTGLVRLLSTCASGSPIGAKT 362
            ASSPDKLDELCNHGLV QAASLISTS+SGGGQASLS  TYTGL+RLLSTCASGSP+GAKT
Sbjct: 139  ASSPDKLDELCNHGLVDQAASLISTSNSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKT 198

Query: 363  LLLLGSSGILKDILSGSGLVASMSVSPALSRPPEQIFEIVNLANELLPPLSQGTISLLAS 542
            LLLLG SGILKDILSGSGLVAS+SVSPA+SRPPEQIFEIVNLANELLPPL +G ISL AS
Sbjct: 199  LLLLGISGILKDILSGSGLVASISVSPAISRPPEQIFEIVNLANELLPPLPEGIISLPAS 258

Query: 543  TNIFVKGSLTKKPPTSSSGKQEDL--NEIEVSTHEKLLNEHPELLRQFGMDLLPVLVQIY 716
            +N+ VKG+L KK P+SSSGKQED+  N  EVS  EKLLN+ PELL+QFGMDLLPVL+QIY
Sbjct: 259  SNLLVKGTLVKKAPSSSSGKQEDVNGNVPEVSAREKLLNDQPELLQQFGMDLLPVLIQIY 318

Query: 717  GSSVNGPVRHKCLSVIGKLMYFSSVEMIQSLLSVTNISSFLAGVLAWKDPQVLVPALQIA 896
            GSSVNGPVRHKCLSVIGKLMYFS+ +MIQSL+SVTNISSFLAGVLAWKDPQVLVPALQIA
Sbjct: 319  GSSVNGPVRHKCLSVIGKLMYFSTADMIQSLISVTNISSFLAGVLAWKDPQVLVPALQIA 378

Query: 897  EILMKKLPGTFSKI 938
            EILM+KLPGTFSK+
Sbjct: 379  EILMEKLPGTFSKM 392


>ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 2 [Vitis
            vinifera]
          Length = 1814

 Score =  533 bits (1372), Expect = e-149
 Identities = 277/314 (88%), Positives = 296/314 (94%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3    STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 182
            STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF
Sbjct: 262  STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 321

Query: 183  ASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSPSTYTGLVRLLSTCASGSPIGAKT 362
            ASSPDKLDELCNHGLV QAASLISTS+SGGGQASLS  TYTGL+RLLSTCASGSP+GAKT
Sbjct: 322  ASSPDKLDELCNHGLVDQAASLISTSNSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKT 381

Query: 363  LLLLGSSGILKDILSGSGLVASMSVSPALSRPPEQIFEIVNLANELLPPLSQGTISLLAS 542
            LLLLG SGILKDILSGSGLVAS+SVSPA+SRPPEQIFEIVNLANELLPPL +G ISL AS
Sbjct: 382  LLLLGISGILKDILSGSGLVASISVSPAISRPPEQIFEIVNLANELLPPLPEGIISLPAS 441

Query: 543  TNIFVKGSLTKKPPTSSSGKQEDL--NEIEVSTHEKLLNEHPELLRQFGMDLLPVLVQIY 716
            +N+ VKG+L KK P+SSSGKQED+  N  EVS  EKLLN+ PELL+QFGMDLLPVL+QIY
Sbjct: 442  SNLLVKGTLVKKAPSSSSGKQEDVNGNVPEVSAREKLLNDQPELLQQFGMDLLPVLIQIY 501

Query: 717  GSSVNGPVRHKCLSVIGKLMYFSSVEMIQSLLSVTNISSFLAGVLAWKDPQVLVPALQIA 896
            GSSVNGPVRHKCLSVIGKLMYFS+ +MIQSL+SVTNISSFLAGVLAWKDPQVLVPALQIA
Sbjct: 502  GSSVNGPVRHKCLSVIGKLMYFSTADMIQSLISVTNISSFLAGVLAWKDPQVLVPALQIA 561

Query: 897  EILMKKLPGTFSKI 938
            EILM+KLPGTFSK+
Sbjct: 562  EILMEKLPGTFSKM 575


>ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 1 [Vitis
            vinifera]
          Length = 1896

 Score =  533 bits (1372), Expect = e-149
 Identities = 277/314 (88%), Positives = 296/314 (94%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3    STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 182
            STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF
Sbjct: 323  STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 382

Query: 183  ASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSPSTYTGLVRLLSTCASGSPIGAKT 362
            ASSPDKLDELCNHGLV QAASLISTS+SGGGQASLS  TYTGL+RLLSTCASGSP+GAKT
Sbjct: 383  ASSPDKLDELCNHGLVDQAASLISTSNSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKT 442

Query: 363  LLLLGSSGILKDILSGSGLVASMSVSPALSRPPEQIFEIVNLANELLPPLSQGTISLLAS 542
            LLLLG SGILKDILSGSGLVAS+SVSPA+SRPPEQIFEIVNLANELLPPL +G ISL AS
Sbjct: 443  LLLLGISGILKDILSGSGLVASISVSPAISRPPEQIFEIVNLANELLPPLPEGIISLPAS 502

Query: 543  TNIFVKGSLTKKPPTSSSGKQEDL--NEIEVSTHEKLLNEHPELLRQFGMDLLPVLVQIY 716
            +N+ VKG+L KK P+SSSGKQED+  N  EVS  EKLLN+ PELL+QFGMDLLPVL+QIY
Sbjct: 503  SNLLVKGTLVKKAPSSSSGKQEDVNGNVPEVSAREKLLNDQPELLQQFGMDLLPVLIQIY 562

Query: 717  GSSVNGPVRHKCLSVIGKLMYFSSVEMIQSLLSVTNISSFLAGVLAWKDPQVLVPALQIA 896
            GSSVNGPVRHKCLSVIGKLMYFS+ +MIQSL+SVTNISSFLAGVLAWKDPQVLVPALQIA
Sbjct: 563  GSSVNGPVRHKCLSVIGKLMYFSTADMIQSLISVTNISSFLAGVLAWKDPQVLVPALQIA 622

Query: 897  EILMKKLPGTFSKI 938
            EILM+KLPGTFSK+
Sbjct: 623  EILMEKLPGTFSKM 636


>ref|XP_002530820.1| hect ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223529612|gb|EEF31560.1| hect ubiquitin-protein
            ligase, putative [Ricinus communis]
          Length = 1899

 Score =  517 bits (1331), Expect = e-144
 Identities = 271/314 (86%), Positives = 290/314 (92%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3    STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 182
            STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF
Sbjct: 328  STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 387

Query: 183  ASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSPSTYTGLVRLLSTCASGSPIGAKT 362
            AS+P+KLDELCNHGLVTQAASLISTS++GGGQASLSP TYTGL+RLLST ASGSP+GAKT
Sbjct: 388  ASAPEKLDELCNHGLVTQAASLISTSNAGGGQASLSPPTYTGLIRLLSTFASGSPLGAKT 447

Query: 363  LLLLGSSGILKDILSGSGLVASMSVSPALSRPPEQIFEIVNLANELLPPLSQGTISLLAS 542
            LLLL  SGILKDILSGSG+ A+ SV PALSRP EQIFEIVNLANELLPPL QGTISL AS
Sbjct: 448  LLLLEISGILKDILSGSGVSANSSVPPALSRPAEQIFEIVNLANELLPPLPQGTISLPAS 507

Query: 543  TNIFVKGSLTKKPPTSSSGKQEDL--NEIEVSTHEKLLNEHPELLRQFGMDLLPVLVQIY 716
            +N+FVKG + KK P+SSSGKQ+DL  N  EVS  EKLL + PELL+QFGMDLLPVL+QIY
Sbjct: 508  SNVFVKGPVVKKSPSSSSGKQDDLNGNVPEVSAREKLLKDQPELLQQFGMDLLPVLLQIY 567

Query: 717  GSSVNGPVRHKCLSVIGKLMYFSSVEMIQSLLSVTNISSFLAGVLAWKDPQVLVPALQIA 896
            GSSVN PVRHKCLSVIGKLMYFSS EMIQSLLS+TNISSFLAGVLAWKDP VLVPALQIA
Sbjct: 568  GSSVNSPVRHKCLSVIGKLMYFSSAEMIQSLLSITNISSFLAGVLAWKDPHVLVPALQIA 627

Query: 897  EILMKKLPGTFSKI 938
            EILM+KLPGTFSK+
Sbjct: 628  EILMEKLPGTFSKM 641


>ref|XP_003537809.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Glycine max]
          Length = 1872

 Score =  515 bits (1326), Expect = e-144
 Identities = 267/314 (85%), Positives = 287/314 (91%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3    STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAF 182
            STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHD+KVLEHASVCLTRIAEAF
Sbjct: 313  STGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAEAF 372

Query: 183  ASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSPSTYTGLVRLLSTCASGSPIGAKT 362
            ASSPDKLDELCNHGLVTQA SLIS SSSGGGQASLS  TYTGL+RLLSTCASGSP+GAKT
Sbjct: 373  ASSPDKLDELCNHGLVTQATSLISNSSSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKT 432

Query: 363  LLLLGSSGILKDILSGSGLVASMSVSPALSRPPEQIFEIVNLANELLPPLSQGTISLLAS 542
            LLLLG SGILKDILSGSG+ ++ SVSPALSRPPEQIFEIVNLANELLPPL  GTISL   
Sbjct: 433  LLLLGISGILKDILSGSGVSSNASVSPALSRPPEQIFEIVNLANELLPPLPHGTISLPII 492

Query: 543  TNIFVKGSLTKKPPTSSSGKQEDL--NEIEVSTHEKLLNEHPELLRQFGMDLLPVLVQIY 716
            +N+F+KG + KK P+ SSGKQED   N  E+S  EKLLN+ PELL+QF MDLLPVL+QIY
Sbjct: 493  SNMFLKGPIVKKSPSGSSGKQEDTNGNVPEISAREKLLNDQPELLKQFAMDLLPVLIQIY 552

Query: 717  GSSVNGPVRHKCLSVIGKLMYFSSVEMIQSLLSVTNISSFLAGVLAWKDPQVLVPALQIA 896
            GSSVNGPVRHKCLSVIGKLMYFS+ EMIQSLLSVTNISSFLAGVLAWKDP VL+PAL+IA
Sbjct: 553  GSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLAWKDPHVLLPALKIA 612

Query: 897  EILMKKLPGTFSKI 938
            EILM+KLPGTFSK+
Sbjct: 613  EILMEKLPGTFSKM 626


Top