BLASTX nr result

ID: Panax21_contig00008234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008234
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61731.1| hypothetical protein VITISV_008284 [Vitis vinifera]    96   3e-17
emb|CBI37879.3| unnamed protein product [Vitis vinifera]               94   8e-17
ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    94   8e-17
ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    94   8e-17
ref|XP_003537809.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    89   3e-15

>emb|CAN61731.1| hypothetical protein VITISV_008284 [Vitis vinifera]
          Length = 225

 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 59/102 (57%), Positives = 64/102 (62%), Gaps = 13/102 (12%)
 Frame = -2

Query: 1477 QICALSTATNMCKKLPSDVXXXXXXXXXXXLQMPS-------------LGLVRLLSTCAS 1337
            Q  ALSTA +MCKKL  D              +                GLVRLLST AS
Sbjct: 19   QRVALSTAADMCKKLXLDAAEFVMEAVPLLTNLLQHHDAKASLSTPTYTGLVRLLSTYAS 78

Query: 1336 GSPLGAKTLLLLGSSGILKDILSGFGLIASMSVSPALSRPPE 1211
            GSPLGAKTLLLLG SGILKDILSGFGL+AS+SVSPA+SR PE
Sbjct: 79   GSPLGAKTLLLLGISGILKDILSGFGLVASISVSPAISRLPE 120


>emb|CBI37879.3| unnamed protein product [Vitis vinifera]
          Length = 1352

 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = -2

Query: 1369 GLVRLLSTCASGSPLGAKTLLLLGSSGILKDILSGFGLIASMSVSPALSRPPE 1211
            GL+RLLSTCASGSPLGAKTLLLLG SGILKDILSG GL+AS+SVSPA+SRPPE
Sbjct: 180  GLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGLVASISVSPAISRPPE 232


>ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 2 [Vitis
            vinifera]
          Length = 1814

 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = -2

Query: 1369 GLVRLLSTCASGSPLGAKTLLLLGSSGILKDILSGFGLIASMSVSPALSRPPE 1211
            GL+RLLSTCASGSPLGAKTLLLLG SGILKDILSG GL+AS+SVSPA+SRPPE
Sbjct: 363  GLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGLVASISVSPAISRPPE 415


>ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 1 [Vitis
            vinifera]
          Length = 1896

 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = -2

Query: 1369 GLVRLLSTCASGSPLGAKTLLLLGSSGILKDILSGFGLIASMSVSPALSRPPE 1211
            GL+RLLSTCASGSPLGAKTLLLLG SGILKDILSG GL+AS+SVSPA+SRPPE
Sbjct: 424  GLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGLVASISVSPAISRPPE 476


>ref|XP_003537809.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Glycine max]
          Length = 1872

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = -2

Query: 1369 GLVRLLSTCASGSPLGAKTLLLLGSSGILKDILSGFGLIASMSVSPALSRPPE 1211
            GL+RLLSTCASGSPLGAKTLLLLG SGILKDILSG G+ ++ SVSPALSRPPE
Sbjct: 414  GLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSNASVSPALSRPPE 466


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