BLASTX nr result
ID: Panax21_contig00008223
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00008223 (502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic ... 116 5e-34 ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|1... 108 7e-34 ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-... 102 9e-34 ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arab... 86 5e-25 gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana] gi|203... 85 1e-24 >ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic [Vitis vinifera] gi|147792791|emb|CAN71033.1| hypothetical protein VITISV_000355 [Vitis vinifera] Length = 218 Score = 116 bits (290), Expect(2) = 5e-34 Identities = 55/86 (63%), Positives = 65/86 (75%) Frame = +2 Query: 245 GPALEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSM 424 G LEP LP LSLYRSIPYAS+VAF ALY+GV RNP+ S + RFN MQA + Sbjct: 100 GLVLEPILPILSLYRSIPYASFVAFFALYLGVVRNPSFSRFVRFNSMQAVVLDVLLVVPL 159 Query: 425 LIERIFNPGRAGIGYKLMVMGHNALF 502 L+ RIFNPGRAG+G++LMVMGHNA+F Sbjct: 160 LVNRIFNPGRAGVGFRLMVMGHNAIF 185 Score = 53.1 bits (126), Expect(2) = 5e-34 Identities = 23/35 (65%), Positives = 28/35 (80%) Frame = +3 Query: 117 AISASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFL 221 +I+ SY+ P T+RL+SA AY PFFNGLQYGRFL Sbjct: 58 SITMSYSAVPATERLISAAAYCLPFFNGLQYGRFL 92 >ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|118482664|gb|ABK93251.1| unknown [Populus trichocarpa] gi|222839196|gb|EEE77547.1| predicted protein [Populus trichocarpa] Length = 209 Score = 108 bits (270), Expect(2) = 7e-34 Identities = 51/83 (61%), Positives = 62/83 (74%) Frame = +2 Query: 254 LEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSMLIE 433 ++P +P LSLYRSIPYAS+VAF ALY+GV RNP+ S Y RFN MQA +L+ Sbjct: 94 VDPLIPLLSLYRSIPYASFVAFFALYLGVVRNPSFSQYVRFNAMQAVTLDVLLVVPLLLT 153 Query: 434 RIFNPGRAGIGYKLMVMGHNALF 502 RI +PGRAG+G+KLMV GHNALF Sbjct: 154 RILSPGRAGLGFKLMVWGHNALF 176 Score = 60.5 bits (145), Expect(2) = 7e-34 Identities = 27/37 (72%), Positives = 29/37 (78%) Frame = +3 Query: 114 TAISASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFLF 224 T SYNPTP TDRL+SAV+Y PFFN LQYGRFLF Sbjct: 48 TVTRMSYNPTPATDRLVSAVSYTLPFFNSLQYGRFLF 84 >ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-like [Cucumis sativus] gi|449485336|ref|XP_004157137.1| PREDICTED: protein TIC 20-II, chloroplastic-like [Cucumis sativus] Length = 208 Score = 102 bits (254), Expect(2) = 9e-34 Identities = 49/86 (56%), Positives = 61/86 (70%) Frame = +2 Query: 245 GPALEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSM 424 G A EP LP L LYRSIP++S+VAF ALY+GV RNP+ + Y RFN MQA + Sbjct: 90 GFAFEPLLPILGLYRSIPHSSFVAFFALYLGVVRNPSFNHYVRFNSMQAVTLDVLLVVPL 149 Query: 425 LIERIFNPGRAGIGYKLMVMGHNALF 502 LI+RI +PGR+GIG+K+MV HN LF Sbjct: 150 LIQRILSPGRSGIGFKIMVWSHNGLF 175 Score = 66.2 bits (160), Expect(2) = 9e-34 Identities = 30/42 (71%), Positives = 32/42 (76%) Frame = +3 Query: 99 QQPHLTAISASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFLF 224 + P T I SYNPTP TDRL+SAVAY PFFN LQYGRFLF Sbjct: 42 KSPKFTPIRMSYNPTPATDRLISAVAYTLPFFNSLQYGRFLF 83 >ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arabidopsis lyrata subsp. lyrata] gi|297327974|gb|EFH58394.1| hypothetical protein ARALYDRAFT_483969 [Arabidopsis lyrata subsp. lyrata] Length = 209 Score = 86.3 bits (212), Expect(2) = 5e-25 Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 1/87 (1%) Frame = +2 Query: 245 GPALEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSM 424 G EP P L+LYRS+PYAS+VAF LY+GV RN +LS Y RFN MQA + Sbjct: 90 GLLFEPIFPILNLYRSVPYASFVAFFGLYLGVVRNTSLSRYVRFNAMQAVTLDVLLAVPV 149 Query: 425 LIERIFNPGR-AGIGYKLMVMGHNALF 502 L+ RI +PG+ G G K M+ GH +F Sbjct: 150 LLTRILDPGQGGGFGMKAMMWGHTGVF 176 Score = 53.1 bits (126), Expect(2) = 5e-25 Identities = 22/33 (66%), Positives = 26/33 (78%) Frame = +3 Query: 126 ASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFLF 224 ASY PTP T+R++S +Y PFFN LQYGRFLF Sbjct: 51 ASYTPTPATERVISIASYALPFFNSLQYGRFLF 83 >gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana] gi|20334890|gb|AAM16201.1| At2g47840/F17A22.23 [Arabidopsis thaliana] Length = 208 Score = 84.7 bits (208), Expect(2) = 1e-24 Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 1/87 (1%) Frame = +2 Query: 245 GPALEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSM 424 G EP P L+LYRS+PYAS+VAF LY+GV RN + S Y RFN MQA + Sbjct: 89 GLLFEPIFPILNLYRSVPYASFVAFFGLYLGVVRNTSFSRYVRFNAMQAVTLDVLLAVPV 148 Query: 425 LIERIFNPGR-AGIGYKLMVMGHNALF 502 L+ RI +PG+ G G K M+ GH +F Sbjct: 149 LLTRILDPGQGGGFGMKAMMWGHTGVF 175 Score = 53.1 bits (126), Expect(2) = 1e-24 Identities = 22/33 (66%), Positives = 26/33 (78%) Frame = +3 Query: 126 ASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFLF 224 ASY PTP T+R++S +Y PFFN LQYGRFLF Sbjct: 50 ASYTPTPATERVISIASYALPFFNSLQYGRFLF 82