BLASTX nr result

ID: Panax21_contig00008223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008223
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic ...   116   5e-34
ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|1...   108   7e-34
ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-...   102   9e-34
ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arab...    86   5e-25
gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana] gi|203...    85   1e-24

>ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic [Vitis vinifera]
           gi|147792791|emb|CAN71033.1| hypothetical protein
           VITISV_000355 [Vitis vinifera]
          Length = 218

 Score =  116 bits (290), Expect(2) = 5e-34
 Identities = 55/86 (63%), Positives = 65/86 (75%)
 Frame = +2

Query: 245 GPALEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSM 424
           G  LEP LP LSLYRSIPYAS+VAF ALY+GV RNP+ S + RFN MQA          +
Sbjct: 100 GLVLEPILPILSLYRSIPYASFVAFFALYLGVVRNPSFSRFVRFNSMQAVVLDVLLVVPL 159

Query: 425 LIERIFNPGRAGIGYKLMVMGHNALF 502
           L+ RIFNPGRAG+G++LMVMGHNA+F
Sbjct: 160 LVNRIFNPGRAGVGFRLMVMGHNAIF 185



 Score = 53.1 bits (126), Expect(2) = 5e-34
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +3

Query: 117 AISASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFL 221
           +I+ SY+  P T+RL+SA AY  PFFNGLQYGRFL
Sbjct: 58  SITMSYSAVPATERLISAAAYCLPFFNGLQYGRFL 92


>ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|118482664|gb|ABK93251.1|
           unknown [Populus trichocarpa]
           gi|222839196|gb|EEE77547.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  108 bits (270), Expect(2) = 7e-34
 Identities = 51/83 (61%), Positives = 62/83 (74%)
 Frame = +2

Query: 254 LEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSMLIE 433
           ++P +P LSLYRSIPYAS+VAF ALY+GV RNP+ S Y RFN MQA          +L+ 
Sbjct: 94  VDPLIPLLSLYRSIPYASFVAFFALYLGVVRNPSFSQYVRFNAMQAVTLDVLLVVPLLLT 153

Query: 434 RIFNPGRAGIGYKLMVMGHNALF 502
           RI +PGRAG+G+KLMV GHNALF
Sbjct: 154 RILSPGRAGLGFKLMVWGHNALF 176



 Score = 60.5 bits (145), Expect(2) = 7e-34
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = +3

Query: 114 TAISASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFLF 224
           T    SYNPTP TDRL+SAV+Y  PFFN LQYGRFLF
Sbjct: 48  TVTRMSYNPTPATDRLVSAVSYTLPFFNSLQYGRFLF 84


>ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-like [Cucumis sativus]
           gi|449485336|ref|XP_004157137.1| PREDICTED: protein TIC
           20-II, chloroplastic-like [Cucumis sativus]
          Length = 208

 Score =  102 bits (254), Expect(2) = 9e-34
 Identities = 49/86 (56%), Positives = 61/86 (70%)
 Frame = +2

Query: 245 GPALEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSM 424
           G A EP LP L LYRSIP++S+VAF ALY+GV RNP+ + Y RFN MQA          +
Sbjct: 90  GFAFEPLLPILGLYRSIPHSSFVAFFALYLGVVRNPSFNHYVRFNSMQAVTLDVLLVVPL 149

Query: 425 LIERIFNPGRAGIGYKLMVMGHNALF 502
           LI+RI +PGR+GIG+K+MV  HN LF
Sbjct: 150 LIQRILSPGRSGIGFKIMVWSHNGLF 175



 Score = 66.2 bits (160), Expect(2) = 9e-34
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = +3

Query: 99  QQPHLTAISASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFLF 224
           + P  T I  SYNPTP TDRL+SAVAY  PFFN LQYGRFLF
Sbjct: 42  KSPKFTPIRMSYNPTPATDRLISAVAYTLPFFNSLQYGRFLF 83


>ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arabidopsis lyrata subsp.
           lyrata] gi|297327974|gb|EFH58394.1| hypothetical protein
           ARALYDRAFT_483969 [Arabidopsis lyrata subsp. lyrata]
          Length = 209

 Score = 86.3 bits (212), Expect(2) = 5e-25
 Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +2

Query: 245 GPALEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSM 424
           G   EP  P L+LYRS+PYAS+VAF  LY+GV RN +LS Y RFN MQA          +
Sbjct: 90  GLLFEPIFPILNLYRSVPYASFVAFFGLYLGVVRNTSLSRYVRFNAMQAVTLDVLLAVPV 149

Query: 425 LIERIFNPGR-AGIGYKLMVMGHNALF 502
           L+ RI +PG+  G G K M+ GH  +F
Sbjct: 150 LLTRILDPGQGGGFGMKAMMWGHTGVF 176



 Score = 53.1 bits (126), Expect(2) = 5e-25
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = +3

Query: 126 ASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFLF 224
           ASY PTP T+R++S  +Y  PFFN LQYGRFLF
Sbjct: 51  ASYTPTPATERVISIASYALPFFNSLQYGRFLF 83


>gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana]
           gi|20334890|gb|AAM16201.1| At2g47840/F17A22.23
           [Arabidopsis thaliana]
          Length = 208

 Score = 84.7 bits (208), Expect(2) = 1e-24
 Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +2

Query: 245 GPALEPFLPFLSLYRSIPYASYVAFLALYIGVGRNPNLSLYARFNVMQAXXXXXXXXXSM 424
           G   EP  P L+LYRS+PYAS+VAF  LY+GV RN + S Y RFN MQA          +
Sbjct: 89  GLLFEPIFPILNLYRSVPYASFVAFFGLYLGVVRNTSFSRYVRFNAMQAVTLDVLLAVPV 148

Query: 425 LIERIFNPGR-AGIGYKLMVMGHNALF 502
           L+ RI +PG+  G G K M+ GH  +F
Sbjct: 149 LLTRILDPGQGGGFGMKAMMWGHTGVF 175



 Score = 53.1 bits (126), Expect(2) = 1e-24
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = +3

Query: 126 ASYNPTPVTDRLLSAVAYFFPFFNGLQYGRFLF 224
           ASY PTP T+R++S  +Y  PFFN LQYGRFLF
Sbjct: 50  ASYTPTPATERVISIASYALPFFNSLQYGRFLF 82


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