BLASTX nr result

ID: Panax21_contig00008214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008214
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529920.1| dihydrolipoamide succinyltransferase compone...   278   1e-72
ref|XP_002317337.1| predicted protein [Populus trichocarpa] gi|2...   276   3e-72
ref|XP_002300330.1| predicted protein [Populus trichocarpa] gi|2...   275   6e-72
ref|XP_004139791.1| PREDICTED: dihydrolipoyllysine-residue succi...   273   4e-71
ref|XP_002266593.2| PREDICTED: dihydrolipoyllysine-residue succi...   271   1e-70

>ref|XP_002529920.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate
           dehydrogenase, putative [Ricinus communis]
           gi|223530597|gb|EEF32474.1| dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase, putative [Ricinus communis]
          Length = 469

 Score =  278 bits (710), Expect = 1e-72
 Identities = 145/165 (87%), Positives = 149/165 (90%)
 Frame = -1

Query: 753 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN 574
           AAVSGLQNQPIINAV             ISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN
Sbjct: 305 AAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN 364

Query: 573 TLAKKATAGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG 394
           TLAKKA  G+ISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG
Sbjct: 365 TLAKKANDGTISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG 424

Query: 393 NIVSRPMMYIALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLLDV 259
           N+V RPMMYIALTYDHRLIDGREAV+FLRRIKDVVEDPRRLLLD+
Sbjct: 425 NVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEDPRRLLLDI 469


>ref|XP_002317337.1| predicted protein [Populus trichocarpa] gi|222860402|gb|EEE97949.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  276 bits (707), Expect = 3e-72
 Identities = 145/165 (87%), Positives = 149/165 (90%)
 Frame = -1

Query: 753 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN 574
           AAVSGLQNQPIINAV             ISIAVGTPKGLVVPVIRNA+KMNFAEIEKEIN
Sbjct: 303 AAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNAEKMNFAEIEKEIN 362

Query: 573 TLAKKATAGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG 394
           TLAKKA  G+ISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG
Sbjct: 363 TLAKKANDGTISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG 422

Query: 393 NIVSRPMMYIALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLLDV 259
           N+V RPMMYIALTYDHRLIDGREAV+FLRRIKDVVEDPRRLLLDV
Sbjct: 423 NVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEDPRRLLLDV 467


>ref|XP_002300330.1| predicted protein [Populus trichocarpa] gi|222847588|gb|EEE85135.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  275 bits (704), Expect = 6e-72
 Identities = 145/165 (87%), Positives = 148/165 (89%)
 Frame = -1

Query: 753 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN 574
           AAVSGLQNQPIINAV             ISIAVGTPKGLVVPVIRNA KMNFAEIEKEIN
Sbjct: 270 AAVSGLQNQPIINAVIDGDDIIYRDYVDISIAVGTPKGLVVPVIRNAGKMNFAEIEKEIN 329

Query: 573 TLAKKATAGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG 394
           TLAKKA  G+ISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG
Sbjct: 330 TLAKKANDGTISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG 389

Query: 393 NIVSRPMMYIALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLLDV 259
           N+V RPMMYIALTYDHRLIDGREAV+FLRRIKDVVEDPRRLLLDV
Sbjct: 390 NVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEDPRRLLLDV 434


>ref|XP_004139791.1| PREDICTED: dihydrolipoyllysine-residue succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex 2,
           mitochondrial-like [Cucumis sativus]
           gi|449517675|ref|XP_004165870.1| PREDICTED:
           dihydrolipoyllysine-residue succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex 2,
           mitochondrial-like [Cucumis sativus]
          Length = 469

 Score =  273 bits (697), Expect = 4e-71
 Identities = 142/165 (86%), Positives = 148/165 (89%)
 Frame = -1

Query: 753 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN 574
           AAVSGLQNQPIINAV             ISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN
Sbjct: 305 AAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN 364

Query: 573 TLAKKATAGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG 394
           TLAKKA  G+ISIDEMAGGSFT+SNGGVYGSLLSTPIINPPQSAILGMHSIVSR +VVGG
Sbjct: 365 TLAKKANDGTISIDEMAGGSFTVSNGGVYGSLLSTPIINPPQSAILGMHSIVSRAVVVGG 424

Query: 393 NIVSRPMMYIALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLLDV 259
           N+V RPMMYIALTYDHRLIDGREAV+FLRRIKDVVEDPRRLLLD+
Sbjct: 425 NVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEDPRRLLLDI 469


>ref|XP_002266593.2| PREDICTED: dihydrolipoyllysine-residue succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex 2,
           mitochondrial [Vitis vinifera]
          Length = 473

 Score =  271 bits (693), Expect = 1e-70
 Identities = 141/165 (85%), Positives = 148/165 (89%)
 Frame = -1

Query: 753 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTPKGLVVPVIRNADKMNFAEIEKEIN 574
           AAVSGLQNQPIINAV             ISIAVGTPKGLVVPVIRNAD MNFA+IEK IN
Sbjct: 309 AAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADGMNFADIEKAIN 368

Query: 573 TLAKKATAGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGG 394
           TLA+KA  G+ISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIV+RPMVVGG
Sbjct: 369 TLARKANDGTISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGG 428

Query: 393 NIVSRPMMYIALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLLDV 259
           N+VSRPMMYIALTYDHRLIDGREAV+FLRRIKDVVEDPRRLLLD+
Sbjct: 429 NVVSRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEDPRRLLLDI 473


Top