BLASTX nr result

ID: Panax21_contig00008208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008208
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95003.1| unknown [Populus trichocarpa]                          214   e-114
ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus co...   214   e-114
ref|XP_002301442.1| predicted protein [Populus trichocarpa] gi|2...   214   e-114
ref|XP_003528767.1| PREDICTED: pyruvate dehydrogenase E1 compone...   207   e-113
gb|ACF17669.1| putative pyruvate dehydrogenase E1 alpha subunit ...   204   e-113

>gb|ABK95003.1| unknown [Populus trichocarpa]
          Length = 442

 Score =  214 bits (544), Expect(4) = e-114
 Identities = 102/119 (85%), Positives = 111/119 (93%)
 Frame = +3

Query: 510 EKATLIECETYRFRGHSLADPDELRDPAEKAHYAARDPITTLKKYMVENNLATEAELKAI 689
           E  TL+ECETYRFRGHSLADPDELRDPAEKA YAARDPI  LKKYM+EN+LA+EAELKAI
Sbjct: 324 EGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPIAALKKYMIENSLASEAELKAI 383

Query: 690 EKKIDEVIEDAVELADESPAPSRSQMLENVFADPKGFGIGPDGKYRCEDLKFTEGTAKV 866
           EKKIDEV+E+AVE ADESP PSRSQ+LENVFADPKGFGIGPDG+YRCED KFTEGTA+V
Sbjct: 384 EKKIDEVVEEAVEFADESPHPSRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTARV 442



 Score =  102 bits (255), Expect(4) = e-114
 Identities = 49/62 (79%), Positives = 53/62 (85%), Gaps = 6/62 (9%)
 Frame = +1

Query: 199 GIPVATGTAFTSKYRREVLKEVDCDHVTMASFGDGTCNNGQ------LAALWKLPIIFVV 360
           GIPVATG AF+SKYRREVLKE DCDHVT+A FGDGTCNNGQ      +AALWKLPI+FVV
Sbjct: 208 GIPVATGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 267

Query: 361 EN 366
           EN
Sbjct: 268 EN 269



 Score = 88.2 bits (217), Expect(4) = e-114
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +2

Query: 380 RATSDPQIWKKGPAFGMPRVHVNGMDVLKVREVAKEAVERARRGEG 517
           RATSDP+IWKKGPAFGMP VHV+GMDVLKVREVAKEA+ RARRGEG
Sbjct: 280 RATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEG 325



 Score = 80.1 bits (196), Expect(4) = e-114
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   KEDSVVSTYRDHVHALSKGVPACQVMSELFGKTNGCCRGQG 125
           +EDSVVSTYRDHVHALSKGVPA  VMSELFGKT GCCRGQG
Sbjct: 146 REDSVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQG 186


>ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis]
           gi|223545554|gb|EEF47058.1| pyruvate dehydrogenase,
           putative [Ricinus communis]
          Length = 433

 Score =  214 bits (546), Expect(4) = e-114
 Identities = 101/119 (84%), Positives = 112/119 (94%)
 Frame = +3

Query: 510 EKATLIECETYRFRGHSLADPDELRDPAEKAHYAARDPITTLKKYMVENNLATEAELKAI 689
           E  TL+ECETYRFRGHSLADPDELRDPAEKAHYAARDPIT+LKKY++EN+LA+EAELKAI
Sbjct: 315 EGPTLVECETYRFRGHSLADPDELRDPAEKAHYAARDPITSLKKYIIENSLASEAELKAI 374

Query: 690 EKKIDEVIEDAVELADESPAPSRSQMLENVFADPKGFGIGPDGKYRCEDLKFTEGTAKV 866
           EKKIDEV+ED+VE ADESP P RSQ+LENVFADPKGFGIGPDG+YRCED KFT+GTA V
Sbjct: 375 EKKIDEVVEDSVEFADESPVPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTQGTAHV 433



 Score = 99.8 bits (247), Expect(4) = e-114
 Identities = 50/62 (80%), Positives = 53/62 (85%), Gaps = 6/62 (9%)
 Frame = +1

Query: 199 GIPVATGTAFTSKYRREVLKEVDCDHVTMASFGDGTCNNGQ------LAALWKLPIIFVV 360
           GIPVATG AFTSKYRREVLKE DCDHVT+A FGDGTCNNGQ      +AALWKLPI+FVV
Sbjct: 200 GIPVATGAAFTSKYRREVLKE-DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 258

Query: 361 EN 366
           EN
Sbjct: 259 EN 260



 Score = 89.4 bits (220), Expect(4) = e-114
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +2

Query: 380 RATSDPQIWKKGPAFGMPRVHVNGMDVLKVREVAKEAVERARRGEG 517
           RATSDPQIWKKGPAFGMP VHV+GMDVLKVREVAKEA+ RARRGEG
Sbjct: 271 RATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEG 316



 Score = 81.3 bits (199), Expect(4) = e-114
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   KEDSVVSTYRDHVHALSKGVPACQVMSELFGKTNGCCRGQG 125
           KEDSVVSTYRDHVHALSKGVPA  VMSELFGKT GCCRGQG
Sbjct: 138 KEDSVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQG 178


>ref|XP_002301442.1| predicted protein [Populus trichocarpa] gi|222843168|gb|EEE80715.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  214 bits (544), Expect(4) = e-114
 Identities = 102/119 (85%), Positives = 111/119 (93%)
 Frame = +3

Query: 510 EKATLIECETYRFRGHSLADPDELRDPAEKAHYAARDPITTLKKYMVENNLATEAELKAI 689
           E  TL+ECETYRFRGHSLADPDELRDPAEKA YAARDPI  LKKYM+EN+LA+EAELKAI
Sbjct: 237 EGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPIAALKKYMIENSLASEAELKAI 296

Query: 690 EKKIDEVIEDAVELADESPAPSRSQMLENVFADPKGFGIGPDGKYRCEDLKFTEGTAKV 866
           EKKIDEV+E+AVE ADESP PSRSQ+LENVFADPKGFGIGPDG+YRCED KFTEGTA+V
Sbjct: 297 EKKIDEVVEEAVEFADESPHPSRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTARV 355



 Score =  102 bits (255), Expect(4) = e-114
 Identities = 49/62 (79%), Positives = 53/62 (85%), Gaps = 6/62 (9%)
 Frame = +1

Query: 199 GIPVATGTAFTSKYRREVLKEVDCDHVTMASFGDGTCNNGQ------LAALWKLPIIFVV 360
           GIPVATG AF+SKYRREVLKE DCDHVT+A FGDGTCNNGQ      +AALWKLPI+FVV
Sbjct: 121 GIPVATGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 180

Query: 361 EN 366
           EN
Sbjct: 181 EN 182



 Score = 88.2 bits (217), Expect(4) = e-114
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +2

Query: 380 RATSDPQIWKKGPAFGMPRVHVNGMDVLKVREVAKEAVERARRGEG 517
           RATSDP+IWKKGPAFGMP VHV+GMDVLKVREVAKEA+ RARRGEG
Sbjct: 193 RATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEG 238



 Score = 80.1 bits (196), Expect(4) = e-114
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   KEDSVVSTYRDHVHALSKGVPACQVMSELFGKTNGCCRGQG 125
           +EDSVVSTYRDHVHALSKGVPA  VMSELFGKT GCCRGQG
Sbjct: 59  REDSVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQG 99


>ref|XP_003528767.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-like
           [Glycine max]
          Length = 432

 Score =  207 bits (528), Expect(4) = e-113
 Identities = 97/116 (83%), Positives = 105/116 (90%)
 Frame = +3

Query: 519 TLIECETYRFRGHSLADPDELRDPAEKAHYAARDPITTLKKYMVENNLATEAELKAIEKK 698
           TL+ECETYRFRGHSLADPDELRDPAEK HYA RDPIT LK+Y++ENNLA E ELKAIEKK
Sbjct: 317 TLVECETYRFRGHSLADPDELRDPAEKEHYAGRDPITALKQYLIENNLANEQELKAIEKK 376

Query: 699 IDEVIEDAVELADESPAPSRSQMLENVFADPKGFGIGPDGKYRCEDLKFTEGTAKV 866
           IDE++EDAVE AD SP P RSQ+LENVFADPKGFGIGPDG+YRCED KFTEGTA V
Sbjct: 377 IDEILEDAVEFADSSPLPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 432



 Score =  101 bits (252), Expect(4) = e-113
 Identities = 48/62 (77%), Positives = 53/62 (85%), Gaps = 6/62 (9%)
 Frame = +1

Query: 199 GIPVATGTAFTSKYRREVLKEVDCDHVTMASFGDGTCNNGQ------LAALWKLPIIFVV 360
           GIPVATG AF+SKYRREVLK+ DCDHVT+A FGDGTCNNGQ      +AALWKLPI+FVV
Sbjct: 198 GIPVATGAAFSSKYRREVLKQADCDHVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVV 257

Query: 361 EN 366
           EN
Sbjct: 258 EN 259



 Score = 91.3 bits (225), Expect(4) = e-113
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +2

Query: 380 RATSDPQIWKKGPAFGMPRVHVNGMDVLKVREVAKEAVERARRGEG 517
           RATSDPQIWKKGPAFGMP VHV+GMDVLKVREVAKEAVERARRG+G
Sbjct: 270 RATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVERARRGDG 315



 Score = 80.5 bits (197), Expect(4) = e-113
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   KEDSVVSTYRDHVHALSKGVPACQVMSELFGKTNGCCRGQG 125
           KEDSVVSTYRDHVHALSKGVP+ QVMSELFGK  GCCRGQG
Sbjct: 136 KEDSVVSTYRDHVHALSKGVPSRQVMSELFGKATGCCRGQG 176


>gb|ACF17669.1| putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum]
          Length = 431

 Score =  204 bits (520), Expect(4) = e-113
 Identities = 95/119 (79%), Positives = 107/119 (89%)
 Frame = +3

Query: 510 EKATLIECETYRFRGHSLADPDELRDPAEKAHYAARDPITTLKKYMVENNLATEAELKAI 689
           E  TL+ECETYRFRGHSLADPDELRDPAEK HYA RDPIT LKKYM ENNL  EAELKAI
Sbjct: 313 EGPTLVECETYRFRGHSLADPDELRDPAEKNHYATRDPITALKKYMFENNLVNEAELKAI 372

Query: 690 EKKIDEVIEDAVELADESPAPSRSQMLENVFADPKGFGIGPDGKYRCEDLKFTEGTAKV 866
           +KKIDE++E++VE AD SP P+R+Q+LENVFADP+GFGIGPDG+YRCED KFTEGTA+V
Sbjct: 373 DKKIDELVEESVEFADASPVPARNQLLENVFADPRGFGIGPDGRYRCEDPKFTEGTAQV 431



 Score =  104 bits (260), Expect(4) = e-113
 Identities = 51/62 (82%), Positives = 53/62 (85%), Gaps = 6/62 (9%)
 Frame = +1

Query: 199 GIPVATGTAFTSKYRREVLKEVDCDHVTMASFGDGTCNNGQ------LAALWKLPIIFVV 360
           GIPVATG AFTSKYRREVLKE DCDHVT+A FGDGTCNNGQ      +AALWKLPIIFVV
Sbjct: 197 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFYECLNMAALWKLPIIFVV 256

Query: 361 EN 366
           EN
Sbjct: 257 EN 258



 Score = 85.5 bits (210), Expect(4) = e-113
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = +2

Query: 380 RATSDPQIWKKGPAFGMPRVHVNGMDVLKVREVAKEAVERARRGEG 517
           R+TSDP+IWKKGPAFGMP VHV+GMDVLKVREVA EAV RARRGEG
Sbjct: 269 RSTSDPEIWKKGPAFGMPGVHVDGMDVLKVREVANEAVGRARRGEG 314



 Score = 83.6 bits (205), Expect(4) = e-113
 Identities = 39/41 (95%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   KEDSVVSTYRDHVHALSKGVPACQVMSELFGKTNGCCRGQG 125
           KEDSVVSTYRDHVHALSKGVPA QVMSELFGKT GCCRGQG
Sbjct: 135 KEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQG 175


Top