BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008201
         (2147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314482.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-64
ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis ly...   236   2e-59
ref|NP_188979.2| RNA recognition motif-containing protein [Arabi...   228   5e-57
ref|NP_001118682.1| RNA recognition motif-containing protein [Ar...   211   8e-52
gb|ABF59161.1| unknown protein [Arabidopsis thaliana]                 153   2e-34

>ref|XP_002314482.1| predicted protein [Populus trichocarpa] gi|222863522|gb|EEF00653.1|
            predicted protein [Populus trichocarpa]
          Length = 702

 Score =  253 bits (646), Expect = 1e-64
 Identities = 155/370 (41%), Positives = 224/370 (60%), Gaps = 8/370 (2%)
 Frame = -3

Query: 1269 NHTSDRIRGVQSQANMQNGNEGKQTSSKH----QSAKESPLRIGDLNKIQVALST--EAL 1108
            N    +I+  QS   M     G    +K     +   ++PL   + +  Q  L++  +  
Sbjct: 343  NKKRSKIKKEQSAKTMTKDEGGNLDIAKRIIKLEKTPQAPLETSEKDSNQTPLTSLADGD 402

Query: 1107 HQNKVMVRFLSKTAGEREIVAAFRSFGDILKTE-VSDVR-RNFKIATLYFKTRDGMEKAL 934
             +NK+++RFL K  G+ +I++ FR+ G I K E VS V+  N   A L+F+TR G+ KAL
Sbjct: 403  TENKLLLRFLHKDVGDGDIISCFRNCGPISKIEKVSSVKGSNLFDAFLHFETRQGLHKAL 462

Query: 933  QAIDLVVHGKAVIVEPASSLENLSKKISIPDVIGDPDAPAALVKNPTRTVAIKQLTPEIC 754
            +  ++++      +   +S      +ISIP++IGD D   ALVK+PTRTV IKQLT +I 
Sbjct: 463  EKPEVLIKNSNAFIHDTAS------RISIPNLIGDIDISVALVKHPTRTVKIKQLTDDIS 516

Query: 753  SRHIEEALTFCESKISGIFLGSSSSVAYVEFETEDGKERALAKFSIVVLGKRLFIFRIDT 574
            S  ++EAL+FC S I+ +FLG+SSS AYVEFE+ED KERALAK  + V GK+L IFR+D 
Sbjct: 517  SHQLKEALSFCRSGIN-VFLGASSSNAYVEFESEDAKERALAKHFLQVSGKQLSIFRVDA 575

Query: 573  PRTTVVRISIPNKIPNNPGAVKKLGPILQSCGKVRSSQFRHNGIMDVHFSITEWPNMLKI 394
            PRTTVVRI     +  NP     +  I +S GK+   + RH  I DV+F I EWPNML I
Sbjct: 576  PRTTVVRI-----LNINPQCRSNVLTICKSFGKLWRMKLRHENIADVYFKIDEWPNMLNI 630

Query: 393  LNKLNGMQVMGQQLLAAPASVIPPDVLRELYSQPEERRRLKADMLRLLRKLGENAVHKAR 214
            LN LNG++  G + +A PAS+ PP +L+ L++ P+ERR + + M  LL+KL E+ +  A 
Sbjct: 631  LNSLNGLEADGSRWVAQPASIFPPIILQALWNHPDERRHVISSMQCLLKKL-EHPMDTAE 689

Query: 213  LTEIADKLYG 184
            L  +A +  G
Sbjct: 690  LNNLAARFCG 699


>ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329267|gb|EFH59686.1| nucleic acid binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 785

 Score =  236 bits (602), Expect = 2e-59
 Identities = 151/388 (38%), Positives = 225/388 (57%), Gaps = 13/388 (3%)
 Frame = -3

Query: 1365 NMKHLTECIKKLPRGQQVVSTCESIASSRTDQNHTSDRIRGVQSQ----ANMQNGNEGKQ 1198
            +MK L + +  LP    + +   S+ +S +++   S      Q      A  +  ++G+ 
Sbjct: 387  SMKKLMDSLN-LPTDNGMDAQANSLNASSSEEKSISKSNSAFQKSDGFCATEEEESKGET 445

Query: 1197 TSSKHQS-AKESPLRIGDLN-----KIQVALSTEALHQNKVMVRFLSKTAGEREIVAAFR 1036
               ++QS   ++ L     N     K   ALS      NKV++RFL ++  ++ IV  F 
Sbjct: 446  LVMENQSLCSQATLAATTANPKVTKKSLFALSAGEHSPNKVLLRFLQESCQKKHIVEVFS 505

Query: 1035 SFGDILKTEVSDVRRN--FKIATLYFKTRDGMEKALQAIDLVVHGKAVIVEPASSLENLS 862
             FG +L  +         +K A L F+T   ++KAL+   + V     +VE A+S E++ 
Sbjct: 506  QFGAVLHVQEIPSFEGCIYKDALLTFETNTAVKKALEKGRVTVMNNNAVVE-ATSQEDMV 564

Query: 861  KKISIPDVIGDPDAPAALVKNPTRTVAIKQLTPEICSRHIEEALTFCESKISGIFLGSSS 682
            ++I IPD+IGDPD P ALVK P+RTV I  LT +  S  I+EAL FC S IS   LGSS 
Sbjct: 565  ERICIPDLIGDPDVPVALVKEPSRTVKIHPLTHDFSSNQIKEALKFCRSNISKFILGSSR 624

Query: 681  SVAYVEFETEDGKERALAKFSIVVLGKRLFIFRIDTPRTTVVRISIPNKIPNNPGAVKKL 502
            + A+VEFETEDGKERALA+ SI +   +LFI RID PRTTV RIS  +K      A+K +
Sbjct: 625  TDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPRTTVARISNLSK-----SAMKDV 679

Query: 501  GPILQSCGKVRSSQFRHNGIMDVHFSITEWPNMLKILNKLNGMQVMGQQLLAAPA-SVIP 325
              +    G+++    R NG++DV F ++EWPNML ILN LNGM + G++L+  PA +VIP
Sbjct: 680  RALCVPYGQIKQVYIRGNGVVDVLFDVSEWPNMLNILNSLNGMGIDGKKLVVRPATTVIP 739

Query: 324  PDVLRELYSQPEERRRLKADMLRLLRKL 241
            P++LR L+  P+E+R +K+ +  L+R++
Sbjct: 740  PEILRVLWKDPQEKRYVKSVIQNLVREI 767


>ref|NP_188979.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|11994322|dbj|BAB02281.1| unnamed protein product
            [Arabidopsis thaliana] gi|332643236|gb|AEE76757.1| RNA
            recognition motif-containing protein [Arabidopsis
            thaliana]
          Length = 811

 Score =  228 bits (581), Expect = 5e-57
 Identities = 136/301 (45%), Positives = 193/301 (64%), Gaps = 4/301 (1%)
 Frame = -3

Query: 1131 VALSTEALHQNKVMVRFLSKTAGEREIVAAFRS-FGDILKT-EVSDVRRN-FKIATLYFK 961
            +ALS      NKV++RFL +++ ++ IV AF S FG +L   E+  +    +K A L F+
Sbjct: 499  LALSAGEHSPNKVLLRFLPESSMKKHIVKAFSSQFGAVLHVQEIPSIEGCIYKDALLTFE 558

Query: 960  TRDGMEKALQAIDLVVHGKAVIVEPASSLENLSKKISIPDVIGDPDAPAALVKNPTRTVA 781
            T   ++KAL+   + V     +VE A+S E++ ++I IPD+IGDPD P ALVK P RTV 
Sbjct: 559  TNTAVKKALKKGHVTVMNYNTVVE-ATSQEDMVERICIPDLIGDPDVPVALVKEPARTVK 617

Query: 780  IKQLTPEICSRHIEEALTFCESKISGIFLGSSSSVAYVEFETEDGKERALAKFSIVVLGK 601
            I  LT +  S  I+EAL FC S IS   LGSS + A+VEFETEDGKERALA+ SI +   
Sbjct: 618  IHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNT 677

Query: 600  RLFIFRIDTPRTTVVRISIPNKIPNNPGAVKKLGPILQSCGKVRSSQFRHNGIMDVHFSI 421
            +LFI RID PRT V RIS  +K      A++ +  +    G++R    R  G+ DV F I
Sbjct: 678  QLFISRIDIPRTIVARISNLSK-----SAMRDVRALCVPYGQIRGVYIRGTGVADVFFDI 732

Query: 420  TEWPNMLKILNKLNGMQVMGQQLLAAPA-SVIPPDVLRELYSQPEERRRLKADMLRLLRK 244
            +EWPNML ILN +NGM++ G++L+  PA +VIPP++LR L+  P E+R +K+ +  L+R+
Sbjct: 733  SEWPNMLAILNSMNGMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVRE 792

Query: 243  L 241
            +
Sbjct: 793  I 793


>ref|NP_001118682.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|332643237|gb|AEE76758.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 771

 Score =  211 bits (536), Expect = 8e-52
 Identities = 118/250 (47%), Positives = 164/250 (65%), Gaps = 1/250 (0%)
 Frame = -3

Query: 987  FKIATLYFKTRDGMEKALQAIDLVVHGKAVIVEPASSLENLSKKISIPDVIGDPDAPAAL 808
            +K A L F+T   ++KAL+   + V     +VE A+S E++ ++I IPD+IGDPD P AL
Sbjct: 510  YKDALLTFETNTAVKKALKKGHVTVMNYNTVVE-ATSQEDMVERICIPDLIGDPDVPVAL 568

Query: 807  VKNPTRTVAIKQLTPEICSRHIEEALTFCESKISGIFLGSSSSVAYVEFETEDGKERALA 628
            VK P RTV I  LT +  S  I+EAL FC S IS   LGSS + A+VEFETEDGKERALA
Sbjct: 569  VKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALA 628

Query: 627  KFSIVVLGKRLFIFRIDTPRTTVVRISIPNKIPNNPGAVKKLGPILQSCGKVRSSQFRHN 448
            + SI +   +LFI RID PRT V RIS  +K      A++ +  +    G++R    R  
Sbjct: 629  EHSISICNTQLFISRIDIPRTIVARISNLSK-----SAMRDVRALCVPYGQIRGVYIRGT 683

Query: 447  GIMDVHFSITEWPNMLKILNKLNGMQVMGQQLLAAPA-SVIPPDVLRELYSQPEERRRLK 271
            G+ DV F I+EWPNML ILN +NGM++ G++L+  PA +VIPP++LR L+  P E+R +K
Sbjct: 684  GVADVFFDISEWPNMLAILNSMNGMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVK 743

Query: 270  ADMLRLLRKL 241
            + +  L+R++
Sbjct: 744  SVIQNLVREI 753


>gb|ABF59161.1| unknown protein [Arabidopsis thaliana]
          Length = 226

 Score =  153 bits (387), Expect = 2e-34
 Identities = 84/175 (48%), Positives = 116/175 (66%), Gaps = 1/175 (0%)
 Frame = -3

Query: 762 EICSRHIEEALTFCESKISGIFLGSSSSVAYVEFETEDGKERALAKFSIVVLGKRLFIFR 583
           E  S  I+EAL FC S IS   LGSS + A+VEFETEDGKERALA+ SI +   +LFI R
Sbjct: 39  ERLSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISR 98

Query: 582 IDTPRTTVVRISIPNKIPNNPGAVKKLGPILQSCGKVRSSQFRHNGIMDVHFSITEWPNM 403
           ID PRT V RIS  +K      A++ +  +    G++R    R  G+ DV F I+EWPNM
Sbjct: 99  IDIPRTIVARISNLSK-----SAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNM 153

Query: 402 LKILNKLNGMQVMGQQLLAAPA-SVIPPDVLRELYSQPEERRRLKADMLRLLRKL 241
           L ILN +NGM++ G++L+  PA +VIPP++LR L+  P E+R +K+ +  L+R++
Sbjct: 154 LAILNSMNGMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREI 208