BLASTX nr result

ID: Panax21_contig00008181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008181
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-15
ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine ...    69   6e-15
ref|XP_003535417.1| PREDICTED: probable ion channel CASTOR-like ...    65   4e-13
ref|XP_002517028.1| conserved hypothetical protein [Ricinus comm...    69   2e-12
emb|CBI26352.3| unnamed protein product [Vitis vinifera]               77   5e-12

>ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|222864778|gb|EEF01909.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score = 67.4 bits (163), Expect(2) = 4e-15
 Identities = 29/39 (74%), Positives = 37/39 (94%)
 Frame = -2

Query: 490 INKPTPLRLDVFLPSLQDIRWNFARLLYLFNIQLERNVA 374
           +NKPTPL+LDV LP+LQDI+W+ +RLLYLFN+Q+ERNVA
Sbjct: 43  LNKPTPLQLDVSLPALQDIKWSLSRLLYLFNMQIERNVA 81



 Score = 40.0 bits (92), Expect(2) = 4e-15
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -3

Query: 603 LIQLNSENMMFNAARDLFFYVIRTYVASSFPFACISNSLISP 478
           L QL S N +    +DL  ++I T+ A++ PFAC+SNSL  P
Sbjct: 5   LTQLKSANTLIKIVQDLLPFLIGTFGATNSPFACMSNSLNKP 46


>ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine max]
          Length = 850

 Score = 69.3 bits (168), Expect(2) = 6e-15
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -2

Query: 490 INKPTPLRLDVFLPSLQDIRWNFARLLYLFNIQLERNVAT 371
           +NKP PL LDV LPS+ DIRW+ ARLLYLFNIQLERNVAT
Sbjct: 150 LNKPKPLNLDVSLPSIHDIRWSLARLLYLFNIQLERNVAT 189



 Score = 37.4 bits (85), Expect(2) = 6e-15
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -3

Query: 627 LSSFFLVRLIQLNSENMMFNAARDLFFYVIRTYVASSFPFACISNSLISPHLLD 466
           +S + ++R+      N+M    + +  +V +T  A+S PFAC+SN+L  P  L+
Sbjct: 104 MSLYIILRMTHKQLYNLMIKVGQAVLPHVFQTCSATSLPFACVSNALNKPKPLN 157


>ref|XP_003535417.1| PREDICTED: probable ion channel CASTOR-like [Glycine max]
          Length = 788

 Score = 65.1 bits (157), Expect(2) = 4e-13
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -2

Query: 490 INKPTPLRLDVFLPSLQDIRWNFARLLYLFNIQLERNVA 374
           +NKP PL LDV LPS+ DIRW+ ARLLYLFN+QL+RNVA
Sbjct: 88  LNKPKPLNLDVSLPSIHDIRWSLARLLYLFNMQLDRNVA 126



 Score = 35.4 bits (80), Expect(2) = 4e-13
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = -3

Query: 627 LSSFFLVRLIQLNSENMMFNAARDLFFYVIRTYVASSFPFACISNSLISPHLLD 466
           +S + ++R+      ++M N  + +  +V +   A+S PFAC+SN+L  P  L+
Sbjct: 42  MSLYIILRMTHKQLYDLMINVGQAVLPHVFQICSATSLPFACVSNALNKPKPLN 95


>ref|XP_002517028.1| conserved hypothetical protein [Ricinus communis]
           gi|223543663|gb|EEF45191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 787

 Score = 68.6 bits (166), Expect(2) = 2e-12
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -2

Query: 490 INKPTPLRLDVFLPSLQDIRWNFARLLYLFNIQLERNVAT 371
           +NKPTPL LDV  PS QD++W+ ARLLYLFNIQLERNVAT
Sbjct: 27  LNKPTPLGLDVSFPSFQDLKWSLARLLYLFNIQLERNVAT 66



 Score = 30.0 bits (66), Expect(2) = 2e-12
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 543 VIRTYVASSFPFACISNSLISP 478
           ++ T+ A+S PFACISNSL  P
Sbjct: 9   LVLTFGATSSPFACISNSLNKP 30


>emb|CBI26352.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 38/59 (64%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
 Frame = -2

Query: 538 SNICGF---KFSFCLYIQFINKPTPLRLDVFLPSLQDIRWNFARLLYLFNIQLERNVAT 371
           S +C F      F      +NKPTPLRLDV LPSLQDI+WNF+RL+YLFNI+LERNVAT
Sbjct: 124 SVVCTFGNGSLPFACMSNSLNKPTPLRLDVSLPSLQDIKWNFSRLIYLFNIRLERNVAT 182


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