BLASTX nr result
ID: Panax21_contig00008171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008171
(1024 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518375.1| ring finger protein, putative [Ricinus commu... 359 5e-97
ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264... 359 7e-97
ref|XP_002317370.1| predicted protein [Populus trichocarpa] gi|2... 340 3e-91
ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|2... 324 2e-86
emb|CBI20233.3| unnamed protein product [Vitis vinifera] 312 1e-82
>ref|XP_002518375.1| ring finger protein, putative [Ricinus communis]
gi|223542470|gb|EEF44011.1| ring finger protein, putative
[Ricinus communis]
Length = 549
Score = 359 bits (922), Expect = 5e-97
Identities = 181/339 (53%), Positives = 234/339 (69%), Gaps = 1/339 (0%)
Frame = -3
Query: 1016 RGNDMPSLMDVGSQRSARNRSGAIGVNSLLPHSTNHFIQGHYPGQPFQAAGTPWMDQQLN 837
RGN + S+ +VGS RS RNRSGA G+ S+L HS NHFIQG+Y GQPFQ AG+ W DQ +
Sbjct: 200 RGNGILSIREVGSHRSVRNRSGATGLESVLAHSQNHFIQGNYIGQPFQPAGSLWADQ--H 257
Query: 836 SNAGDIGTLSWNQPHALPPYLHGS-FNGGCMEAANMGVQGFQVAASNRSSATFLPPPPIP 660
S++ D GTL+WNQ A+ Y+HG+ NGG +E ++ Q + +SNRS+ TFL P P
Sbjct: 258 SSSSDAGTLAWNQNPAIN-YMHGNNVNGGSVETGSIVPQRYHELSSNRSNTTFLHPSPPN 316
Query: 659 QGHFNLHHPPPPMQGARGHNIDLNSQVAXXXXXXXXXXXXXXSMNPFQDCGETGSRFVGP 480
H N HHP PP+QG RGHN+++ QV+ ++NP QD + G R G
Sbjct: 317 IRHHNFHHPLPPIQGMRGHNLNVPPQVSAASFRGLTSYASQSNVNPSQDGLDIGVRHPGS 376
Query: 479 VPPTGLRIYRPHRRELMIDATARQRNLPHLRVLPEDGVALMELLDYHEIGDSIDHHRDMR 300
V PTGLRIYRPHR ++ + T R RNLPHLRVLP D +A++E DY+E+ + +DHH DMR
Sbjct: 377 VQPTGLRIYRPHRDGVIPETTLRHRNLPHLRVLPTDRIAVLEFPDYYEVENYVDHHSDMR 436
Query: 299 LDIDHMSYEELLALGEQIGSVGSGLSEEIIIGHLKSRTFVPFTSCANMEDKSSVDQELIS 120
LDI+ MSYEELLALGE+IGSV +GLSEE I LK+R ++ N+E+ + +DQEL S
Sbjct: 437 LDIEDMSYEELLALGERIGSVNTGLSEETIRSQLKTRKYLSSPMSINLEEITCMDQELGS 496
Query: 119 CVICQAEYNDQEIMGILDCGHEYHLECIKKWLLVKNSCP 3
C+ICQ EY +E +G LDCGHEYH +C+KKWL VKN CP
Sbjct: 497 CIICQDEYKSKEKIGTLDCGHEYHADCLKKWLRVKNVCP 535
>ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264059 [Vitis vinifera]
Length = 543
Score = 359 bits (921), Expect = 7e-97
Identities = 185/342 (54%), Positives = 237/342 (69%), Gaps = 4/342 (1%)
Frame = -3
Query: 1016 RGNDMPSLMDVGSQRSARNRSGAIGVNSLLPHSTNHFIQGHYPGQPFQAAGTPWMDQQLN 837
RGN+ PS+M+VGS RS RNRSGA+G++S+L H+ NH +QG+Y G PFQ +G PW+DQQ
Sbjct: 200 RGNNAPSIMEVGSHRSVRNRSGAVGLDSVLAHNHNHLVQGNYIGHPFQPSGNPWVDQQSG 259
Query: 836 SNAGDIGTLSWNQPHALPPYLHGS-FNGGCMEAANMGVQGFQVAASNRSSATFLPPPPIP 660
+N D GTL+WN AL PYLHGS +GG EA N+G+QG+ +S RSS +L PP +
Sbjct: 260 NNGSDGGTLAWNHGPAL-PYLHGSNISGGSREAGNVGIQGYHDTSSGRSSTNYLQPPVLH 318
Query: 659 QGHFNLHH---PPPPMQGARGHNIDLNSQVAXXXXXXXXXXXXXXSMNPFQDCGETGSRF 489
+ H LH+ PPPPMQGAR H + QV P Q E G R
Sbjct: 319 RPH-TLHYPPPPPPPMQGARSH---FHPQVVASSYRLPTISSRGPV--PPQVGVEAGPRH 372
Query: 488 VGPVPPTGLRIYRPHRRELMIDATARQRNLPHLRVLPEDGVALMELLDYHEIGDSIDHHR 309
GPVPPTG+RIYR +R + +AT+R NLP+LR+LP + VA+++L ++E+GD IDHHR
Sbjct: 373 PGPVPPTGIRIYRSNRGGVAPEATSRHHNLPYLRMLPAEEVAILDLSAFYEVGDLIDHHR 432
Query: 308 DMRLDIDHMSYEELLALGEQIGSVGSGLSEEIIIGHLKSRTFVPFTSCANMEDKSSVDQE 129
DMRLDI+ MSYEELLALGE+IG V +GLSEE I LK+RT++ T C N+E+ +S+D E
Sbjct: 433 DMRLDIEDMSYEELLALGERIGHVSTGLSEESITNCLKTRTYISST-CLNLEEAASMDLE 491
Query: 128 LISCVICQAEYNDQEIMGILDCGHEYHLECIKKWLLVKNSCP 3
SC+ICQ EY +QE +G LDCGHEYH C+KKWLLVKN CP
Sbjct: 492 NDSCIICQEEYRNQEKIGFLDCGHEYHAGCLKKWLLVKNVCP 533
>ref|XP_002317370.1| predicted protein [Populus trichocarpa] gi|222860435|gb|EEE97982.1|
predicted protein [Populus trichocarpa]
Length = 517
Score = 340 bits (872), Expect = 3e-91
Identities = 169/330 (51%), Positives = 222/330 (67%), Gaps = 1/330 (0%)
Frame = -3
Query: 989 DVGSQRSARNRSGAIGVNSLLPHSTNHFIQGHYPGQPFQAAGTPWMDQQLNSNAGDIGTL 810
DVGSQ S RNR GA G++ L H+ NHFIQG+Y GQP+Q +G+ W+DQ L+++ D GT
Sbjct: 176 DVGSQSSVRNRLGAAGLDPALAHNLNHFIQGNYLGQPYQPSGSLWLDQHLSNSGTDAGTS 235
Query: 809 SWNQPHALPPYLHGS-FNGGCMEAANMGVQGFQVAASNRSSATFLPPPPIPQGHFNLHHP 633
W Q A+P Y+HG+ NGG +E NMG+Q + ASNRS+A+F P + H N HH
Sbjct: 236 GWTQTTAIP-YMHGNNLNGGPIEIGNMGLQRYHEPASNRSNASFSRPSAVNLQHHNFHHM 294
Query: 632 PPPMQGARGHNIDLNSQVAXXXXXXXXXXXXXXSMNPFQDCGETGSRFVGPVPPTGLRIY 453
PP+QG RGHNI++ Q +MNP QD + G R +G V PTGLR+Y
Sbjct: 295 SPPIQGMRGHNINILPQAPAASFRVPTANASQITMNPSQDGLDIGLRHLGSVQPTGLRMY 354
Query: 452 RPHRRELMIDATARQRNLPHLRVLPEDGVALMELLDYHEIGDSIDHHRDMRLDIDHMSYE 273
R HR ++ + T R RNLP LRVLP DGVA++ DY+E+ + +DHHRDMRLDI+ MSYE
Sbjct: 355 RSHREGVVPETTLRHRNLPQLRVLPTDGVAILGFPDYYEVENHVDHHRDMRLDIEDMSYE 414
Query: 272 ELLALGEQIGSVGSGLSEEIIIGHLKSRTFVPFTSCANMEDKSSVDQELISCVICQAEYN 93
ELLALGE+IG+V +GLSE I LK+RT++ S N+E+ + +DQE SC+ICQ +Y
Sbjct: 415 ELLALGERIGNVNTGLSEGTIRSQLKTRTYLSSPS-INLEEAACMDQEADSCIICQDDYK 473
Query: 92 DQEIMGILDCGHEYHLECIKKWLLVKNSCP 3
+E + LDCGHEYH C+KKWL +KN CP
Sbjct: 474 SKEKIAALDCGHEYHAVCLKKWLRLKNVCP 503
>ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|222846156|gb|EEE83703.1|
predicted protein [Populus trichocarpa]
Length = 535
Score = 324 bits (831), Expect = 2e-86
Identities = 164/339 (48%), Positives = 218/339 (64%), Gaps = 1/339 (0%)
Frame = -3
Query: 1016 RGNDMPSLMDVGSQRSARNRSGAIGVNSLLPHSTNHFIQGHYPGQPFQAAGTPWMDQQLN 837
RG S+ +VGSQRS RNR G++G++ L H+ NHFIQG+Y GQP+Q G+ W++Q L+
Sbjct: 185 RGTSASSIREVGSQRSVRNRLGSVGLDPALTHNPNHFIQGNYLGQPYQPGGSLWLEQHLS 244
Query: 836 SNAGDIGTLSWNQPHALPPYLHGS-FNGGCMEAANMGVQGFQVAASNRSSATFLPPPPIP 660
+ + D G W Q +P Y+HG+ NG +E +MG Q + ASNRS+A+F P P+
Sbjct: 245 NGSTDAGASVWTQTPTIP-YMHGNNVNGVPIETGSMGPQRYHEPASNRSNASFSHPSPVN 303
Query: 659 QGHFNLHHPPPPMQGARGHNIDLNSQVAXXXXXXXXXXXXXXSMNPFQDCGETGSRFVGP 480
H N HH PP+QG RGHNI++ Q +MN QD + G R G
Sbjct: 304 PQHHNFHHLSPPIQGIRGHNINILPQAPAASFRVPTANASQSTMNLSQDGLDIGLRNPGS 363
Query: 479 VPPTGLRIYRPHRRELMIDATARQRNLPHLRVLPEDGVALMELLDYHEIGDSIDHHRDMR 300
V PTGLR+YRP + + T R RNLP LRVLP DGVA++ DY+E+ + DHHRDMR
Sbjct: 364 VQPTGLRMYRPRHEGVAPETTLRHRNLPRLRVLPTDGVAILGFPDYYEVENYADHHRDMR 423
Query: 299 LDIDHMSYEELLALGEQIGSVGSGLSEEIIIGHLKSRTFVPFTSCANMEDKSSVDQELIS 120
LDI+ MSYEELLALGE+IG+V +GLS+ I LK+RT++ N+E S +DQE S
Sbjct: 424 LDIEDMSYEELLALGERIGNVNTGLSDATIRSQLKTRTYLSSPYSINLE-VSCMDQEADS 482
Query: 119 CVICQAEYNDQEIMGILDCGHEYHLECIKKWLLVKNSCP 3
C+ICQ +Y +E + LDCGHEYH +C+KKWL +KN CP
Sbjct: 483 CIICQDDYKSKEKIASLDCGHEYHADCLKKWLRLKNVCP 521
>emb|CBI20233.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 312 bits (799), Expect = 1e-82
Identities = 165/365 (45%), Positives = 218/365 (59%), Gaps = 29/365 (7%)
Frame = -3
Query: 1010 NDMPSLMDVGSQRSARNRSGAIGVNSLLPHSTNHFIQGHYPGQPFQAAGTPWMDQQLNSN 831
N+ PS+M+VGS RS RNRSGA+G++S+L H+ NH +QG+Y G PFQ +G PW+DQQ +N
Sbjct: 152 NNAPSIMEVGSHRSVRNRSGAVGLDSVLAHNHNHLVQGNYIGHPFQPSGNPWVDQQSGNN 211
Query: 830 AGDIGTLSWNQPHALPPYLHG-------------------------SFNGGCMEAANMGV 726
D GTL+WN ALP YLHG + +GG EA N+G+
Sbjct: 212 GSDGGTLAWNHGPALP-YLHGILSSHIFVSHFRFLNGSHLMTKSRSNISGGSREAGNVGI 270
Query: 725 QGFQVAASNRSSATFLPPPPIPQGH----FNLHHPPPPMQGARGHNIDLNSQVAXXXXXX 558
QG+ +S R + + P + + + P PP G
Sbjct: 271 QGYHDTSSGRRARSHFHPQVVASSYRLPTISSRGPVPPQVGV------------------ 312
Query: 557 XXXXXXXXSMNPFQDCGETGSRFVGPVPPTGLRIYRPHRRELMIDATARQRNLPHLRVLP 378
E G R GPVPPTG+RIYR +R + +AT+R NLP+LR+LP
Sbjct: 313 -----------------EAGPRHPGPVPPTGIRIYRSNRGGVAPEATSRHHNLPYLRMLP 355
Query: 377 EDGVALMELLDYHEIGDSIDHHRDMRLDIDHMSYEELLALGEQIGSVGSGLSEEIIIGHL 198
+ VA+++L ++E+GD IDHHRDMRLDI+ MSYEELLALGE+IG V +GLSEE I L
Sbjct: 356 AEEVAILDLSAFYEVGDLIDHHRDMRLDIEDMSYEELLALGERIGHVSTGLSEESITNCL 415
Query: 197 KSRTFVPFTSCANMEDKSSVDQELISCVICQAEYNDQEIMGILDCGHEYHLECIKKWLLV 18
K+RT++ T C N+E+ +S+D E SC+ICQ EY +QE +G LDCGHEYH C+KKWLLV
Sbjct: 416 KTRTYISST-CLNLEEAASMDLENDSCIICQEEYRNQEKIGFLDCGHEYHAGCLKKWLLV 474
Query: 17 KNSCP 3
KN CP
Sbjct: 475 KNVCP 479